Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGGTCACACCTCCGAAGAGGCTTTTGGGGAAAGAAATTGGAAGCAGTGAACATCGGCGGAGGGTAAATGCGACAAACTCAGCAGCCAGCGCAGGGCCAGACTGCGACGGTGAGCCCTAACACTGCTCCTCCTCACTCTCCCGCCTCTGCGGACGACGCGCCGCCGAAGCAGGTCGCACTCGCCATGGACAGACTCGGCCACGCCGCTCGTCTCATCGCTGACATCAGGCTCGGTGCTGATCGCCTTCTCGAAGCCCTCTGCGTCACTGCCCAGCCTCATCAAAGCACGAAGCCCCTCCACTTGTTTCAGAAAGAAGACGCTTCCATGCGCCAACACCTCCTTGACCTTCGTGCAGTTGGTATTTTGCATCAGTTTTTTAAGAATTTTTTTATAGGGTTAAATCTACGATTTGAAGAAGGGATTTCATTTTTATGGATGAGATCATACAATTGAAAACAAGGGGTTAATATTAGCAAGATTTTAATTGTTTTACTTTTAATTTTGTTAGGAAAGCAGCTCGAAGAGTCTGGTGTTCTCAGCGAATCTCTTCTTTCGAGAAGTAATTCTTGGGGACTACATATGCCTTTAGTGTGTCCTGATGGTGCAGTGGTTGCTTATGCTTGGAAACGTCAACTAGCTGGCCAGGCTGGTGCATCTGCAGTTGACCGAACCAGGTTTGTTTAGACATTTTGCATTTACCTATCCAGGAAAATAGCTGCTCTAGGCCATGTATACGGGAAAACTACTTGAATTTGGAAGTTGACATTTCTTCATATTGCTTCGTGGTAATTTAGACTCGACTGGCTAAGTTAGAGTTCCCAAATTCACTTTTTTTCTTTTTAAAGAAGTAACAGGAAACAGAGCTTCCAGGCTCCGCTTGATGATATTAATTAATTCCGAAATAATTGATCAAGTATTTTGTATAAATATATGTGAGTTTCCATCTTTTGACATATAGGGAAGCATCGGAGGTTATAGCTTAGCTGTGTTGGGGTTAATTAGGGATATTCAGATTAGCCAGGGAAGAAGTAATTCTCGGTTTTGGCTCCCTAATCCTTTTTCTCCTAGTCTTTATGTGCCTCGTTTCCTCCCCAAAAGCCCCTTCATTTTTCTCTCTTTGGAATGTTGGAATGCCAAAAAGCACGAACTTTTTGCCGGGCAGGTTTTGCTCAACAAAGTCAACACTTCGGGATCACATTCTGAGGTATTCTTCGTCCTGTTTTGGTCCTTAGTGGTGCATTTGTGCTGAGGAGCTTTGGAGGATGTTGATCATTTGTTATGGAGTTACCAGTTTGTGCAGTTGATTTGGGGTCAGTTGTTGGACTCCTTTGAGGCTTCTGTTGTTTCCTTTTCTTTTTTGTAAAAATCTTGTGGGTGTGTTTGGCTTGAAAAGAATAGGAGGATCTTTTGATGGTTTGATCGGTCTTGGGATGTTCTCTGGGAAAATATTAAGTTGTTCAATACTTGTGATGGCCTCTATGAGGCCTTTTGTAATCATCAGTCAGGTGTTATTCTATTCGATTGAGACCTTTTTTTTGTAGGCTTGGTTTGGTCTGTTCTTGTGTGGGCTGTCTTTATGTATGCCCCTTGTATCTTCTTTCATGGTTCTCAATAAAAGTTTGGTATTTTATAAAATAAAAATAAGTGAATAAACGAATAAGAAGAAGAAGAACCTAAGTTGTTAGATGGATAGATGCATTGTGGAAATGATATTTCGTGGGCTACCATTAGGTTATGGCCTGTGTCAAACGACATATATTATTAATTTCTTATGTTCATTTTTGTCTTGTAACCAAATGTTAAAGGCCCTTGGATCCAATGAGATGATTATATAGTCACATTGCTTTTTTCACCTACAGATGGTTTTAATTATTGAACATATTTTCTAATACAGAGAGATGAAGTTGACTAATGAATTGGCCTTGAAAATGTTTTTGCTTTTACTTAAGTAGGGCATTTTCAGTTGCCCTGAAATTTTAATACGATAGATAAAATCATGTAATTATCTGACTTCCATTAGTTCAGGTTTTTAACTGATGCTTTACTTGTTAATAGGTTAGCTTTAAAGGCCTTCACGGACCAAAAAAGACGATTTTTCCCTCATCTTGAAGATGAAAATGGGTCGAATAATGAGCCTGCTCTGAAGAAGCCTTGTTTTTCTCATGGAGTGACAGATGTCAAACAAAATGAGCTTAATGATTCTAGATCACTATCAGAGATTCTAACATGTATGGAAAAGGAAGTGCCAGAGCTTAAGATTTTCACTTATGAGCGATTGGACTGGTTAAAACAAGCTTCAGCCCTTCCCTCTCAAGCAAATGAGAATTCAATAGGAGTATTGAAAGAACATAGCTATCATAGTCCTAGGATGAGCCCTGGATCACTTGGTGCTACTCCCGTTGATAAAGCTGGTGTAATTGAGTTGGTCATTCCTTCGGTTTTTAGAGCTGTAGTATCACTGCATCCAGTTGGTTCTGTTGAACCAGATGCTGTCGCTTTCTTTTCTCCTGACGAGGTACTCTATTTTGTGCATAAGTATTCATTGTCAAATTTCCTTACTCGTTATTCTGCTGTACGGACGACAAGAAAATTCTTTCAATGAATTGGGTTATTCCCTGACCATGCTATGGGAGTTCTTTACTCCTTATATGAGGTACTTTACCTGCCAGTTGCATGGTCTAAAGATATGCAACCAATTAATTTATGAAATAATTGGCGTGAGTCTAATAACACTCTGCCATAATTTTTAATGACCTAACTAAGTTCTATTTCTATTATTGAATATCATTGTATCAATGTTCATCATTGTATTTTATCGGATTTGAGACCAAGCAGACATGGTTTTCATTACAAATGCAATTAGACTTTCTTAGATTATTTTTCTAAAATTATTATCTATGCTCCAAGCCTCCACCTGGTTCTGATTTATTGCACTGATTTTCGTTGTCTTACTTGAGCACTTAAGTTGGTAACTGTTGCAGTTTATTTAGAACTTTTTGTGTTGCAACAGAGAGGCAGCCATGTACATGCCAGGGGTTTTTCAAATCATCATTTGTTCAGACATGTTACGGTACCTATCACTTCGCTCATAATGTCTACTTTCATTCACATTTATGGAGGTTGCTCTCTCTCAGAGAGAGATGATAATTTCGTTATATCTTGATGCAGGAGCATGCTGCCACGGTGCTGCAGTATTTTCTTGGAAATCAAGCAAAAGCAGCTCTATATCCTCTATTGGTAACATTCAATCATTGAATTTGTGGACTTGACATATTCTCTCTCCATTTCATTTAAAATACTCTCAATTAATTTGTGGTACTTTCTTGTAGCTTTGGATCTGCAGCTACCAAAATTTATTTTCAAAAGCTTGTAGGTGCGTCTAGGGATTTCAGTGCTTCTACATTTGGTTTTGTATGGATTTGACACTTTAATGGCGTGTTAATCTGGTCTTGCAGTAAATGTGGACAGCTGCTATCAGTAAACAAACAATCCGATTTACTGTTGCCTCCTGCCGTTCGCCCGTACAAGCAATTTTGTGCATCAAAGAACTCATCATCTGTGCCCATAACCTCATTGAAAGACCAGAAGTTGGATTCTGTTCAAGCTTTCCACATTGATTGTTTCTCAGGAGAACTATAGCACAATGAGCCGTACAGGTACAGCTGGAATAAAACACACATGTTCAAATTTTCAATTGCTTGATCATTTTTAAGCCTTTAATTGATTATGAGCTTTTTTTATCTGGTAACAGTGTGCAGTGTGCACCAATTCCTATTAATCTACTATTGTCAGCATTAAAATCCACTAAGCTCATTTCATGGCCCATACTACGACATTTAGTCTGAGTTTAGCTGTTACTTAATAGATACGGAACATTGCAAGGGAGCCTGTTATGTTATGCCTTGATGAGAGGGATATGAATCCGCAGAGATTACATCCGAGTGAGAAATCTTGAGAATATGAAAGTATAGTTAGAAAGGTTTAAAAGAACAAAAAGTTACTACTTATAACAATATTTATAAGACAAGCATTGAAATTTTCCTACGGAGTATGTGAATGAGGAAAAAGCATGTTGAAAGAACCCATGTTGGTTTTTGGGGATAGTCTTCACTTTTGGAAGGATTCAAGACAAGCATGATGTTATTAAGTTGCAGAGGATGCAAGGGAATGAGAAATGTTGGGGCCTTCAGGTGCCAAATTTGGATTTTAAATCTTGAGCCCGGGGCGTTACATCCAGTCTCTTCTCTTACATTCTGATTACTTTATTCTGTTCTACTAGAATGCCTTAATTCTGTTATCTTACACTACGAATGACCAAGCATGAGAGTGTCATATATAAACTCTCTAATCCCATTCATGCTTATGTTATCATTATTTTTTTTTATGTTCCCCTCAAATAATAAACTACTTTCTTCCTTTACCTGTAAACATAGCTAATACACCGTAGGAATCATGTAAATCTTCGTGTCACTTTTTAGAGTTTACGCTTTCTTTACTTGTCAATTTGTTTTCTGTCATAACATGTTCCTTGCCTTTCAACTGCACTGAACCTTGTTTTACTCAGCTTCACTCGTCTAATAATTTGTCTCACGGCCTTGTGGACTCCGATTCACATGTTATACGATAGTATGCACAGAATACAAAGAGGGCGCAGGCTGCTTGCTTCTGCGGCTTTTGGTTATTCACTAGCCTTTGTTGCAATTACATGACAAGGAGGGACATTCAGATTATTCATAGGAGCCAATCGTGATACTGAAAGAACCATCCAGTTTCTGATGTGGTTATTTTCTGTTGGCTCAAGTAGCTTGCCATTGTCAAGGCAAGCAAAGGTCATTTGCTTTGATTTGAGCAATTGCTAGTTCTTTTTCACAATTTGCTCGGAAGATAACTTTTGATTTCAGAATCACTTTTTGTATCTTGCGCCTTCAGATTCAAGTAAGGATGTTAGTCCTTTATTAGTACGAGCTTGTGTATGTACAATACTCTCAAGTTTGGATCGACAGAAGAATAGAGCGAAAAAAATTATAGTGCACATT
mRNA sequence
CTTGGTCACACCTCCGAAGAGGCTTTTGGGGAAAGAAATTGGAAGCAGTGAACATCGGCGGAGGGTAAATGCGACAAACTCAGCAGCCAGCGCAGGGCCAGACTGCGACGGTGAGCCCTAACACTGCTCCTCCTCACTCTCCCGCCTCTGCGGACGACGCGCCGCCGAAGCAGGTCGCACTCGCCATGGACAGACTCGGCCACGCCGCTCGTCTCATCGCTGACATCAGGCTCGGTGCTGATCGCCTTCTCGAAGCCCTCTGCGTCACTGCCCAGCCTCATCAAAGCACGAAGCCCCTCCACTTGTTTCAGAAAGAAGACGCTTCCATGCGCCAACACCTCCTTGACCTTCGTGCAGTTGGAAAGCAGCTCGAAGAGTCTGGTGTTCTCAGCGAATCTCTTCTTTCGAGAAGTAATTCTTGGGGACTACATATGCCTTTAGTGTGTCCTGATGGTGCAGTGGTTGCTTATGCTTGGAAACGTCAACTAGCTGGCCAGGCTGGTGCATCTGCAGTTGACCGAACCAGGTTAGCTTTAAAGGCCTTCACGGACCAAAAAAGACGATTTTTCCCTCATCTTGAAGATGAAAATGGGTCGAATAATGAGCCTGCTCTGAAGAAGCCTTGTTTTTCTCATGGAGTGACAGATGTCAAACAAAATGAGCTTAATGATTCTAGATCACTATCAGAGATTCTAACATGTATGGAAAAGGAAGTGCCAGAGCTTAAGATTTTCACTTATGAGCGATTGGACTGGTTAAAACAAGCTTCAGCCCTTCCCTCTCAAGCAAATGAGAATTCAATAGGAGTATTGAAAGAACATAGCTATCATAGTCCTAGGATGAGCCCTGGATCACTTGGTGCTACTCCCGTTGATAAAGCTGGTGTAATTGAGTTGGTCATTCCTTCGGTTTTTAGAGCTGTAGTATCACTGCATCCAGTTGGTTCTGTTGAACCAGATGCTGTCGCTTTCTTTTCTCCTGACGAGAGAGGCAGCCATGTACATGCCAGGGGTTTTTCAAATCATCATTTGTTCAGACATGTTACGGAGCATGCTGCCACGGTGCTGCAGTATTTTCTTGGAAATCAAGCAAAAGCAGCTCTATATCCTCTATTGCTTTGGATCTGCAGCTACCAAAATTTATTTTCAAAAGCTTGTAGTAAATGTGGACAGCTGCTATCAGTAAACAAACAATCCGATTTACTGTTGCCTCCTGCCGTTCGCCCGTACAAGCAATTTTGTGCATCAAAGAACTCATCATCTGTGCCCATAACCTCATTGAAAGACCAGAAGTTGGATTCTGTTCAAGCTTTCCACATTGATTGTTTCTCAGGAGAACTATAGCACAATGAGCCGTACAGTGTGCAGTGTGCACCAATTCCTATTAATCTACTATTGTCAGCATTAAAATCCACTAAGCTCATTTCATGGCCCATACTACGACATTTAGTCTGAGTTTAGCTGTTACTTAATAGATACGGAACATTGCAAGGGAGCCTGTTATGTTATGCCTTGATGAGAGGGATATGAATCCGCAGAGATTACATCCGAGTGAGAAATCTTGAGAATATGAAAGTATAGTTAGAAAGGTTTAAAAGAACAAAAAGTTACTACTTATAACAATATTTATAAGACAAGCATTGAAATTTTCCTACGGAGTATGTGAATGAGGAAAAAGCATGTTGAAAGAACCCATGTTGGTTTTTGGGGATAGTCTTCACTTTTGGAAGGATTCAAGACAAGCATGATGTTATTAAGTTGCAGAGGATGCAAGGGAATGAGAAATGTTGGGGCCTTCAGGTGCCAAATTTGGATTTTAAATCTTGAGCCCGGGGCGTTACATCCAGTCTCTTCTCTTACATTCTGATTACTTTATTCTGTTCTACTAGAATGCCTTAATTCTGTTATCTTACACTACGAATGACCAAGCATGAGAGTGTCATATATAAACTCTCTAATCCCATTCATGCTTATGTTATCATTATTTTTTTTTATGTTCCCCTCAAATAATAAACTACTTTCTTCCTTTACCTGTAAACATAGCTAATACACCGTAGGAATCATGTAAATCTTCGTGTCACTTTTTAGAGTTTACGCTTTCTTTACTTGTCAATTTGTTTTCTGTCATAACATGTTCCTTGCCTTTCAACTGCACTGAACCTTGTTTTACTCAGCTTCACTCGTCTAATAATTTGTCTCACGGCCTTGTGGACTCCGATTCACATGTTATACGATAGTATGCACAGAATACAAAGAGGGCGCAGGCTGCTTGCTTCTGCGGCTTTTGGTTATTCACTAGCCTTTGTTGCAATTACATGACAAGGAGGGACATTCAGATTATTCATAGGAGCCAATCGTGATACTGAAAGAACCATCCAGTTTCTGATGTGGTTATTTTCTGTTGGCTCAAGTAGCTTGCCATTGTCAAGGCAAGCAAAGGTCATTTGCTTTGATTTGAGCAATTGCTAGTTCTTTTTCACAATTTGCTCGGAAGATAACTTTTGATTTCAGAATCACTTTTTGTATCTTGCGCCTTCAGATTCAAGTAAGGATGTTAGTCCTTTATTAGTACGAGCTTGTGTATGTACAATACTCTCAAGTTTGGATCGACAGAAGAATAGAGCGAAAAAAATTATAGTGCACATT
Coding sequence (CDS)
ATGCGACAAACTCAGCAGCCAGCGCAGGGCCAGACTGCGACGGTGAGCCCTAACACTGCTCCTCCTCACTCTCCCGCCTCTGCGGACGACGCGCCGCCGAAGCAGGTCGCACTCGCCATGGACAGACTCGGCCACGCCGCTCGTCTCATCGCTGACATCAGGCTCGGTGCTGATCGCCTTCTCGAAGCCCTCTGCGTCACTGCCCAGCCTCATCAAAGCACGAAGCCCCTCCACTTGTTTCAGAAAGAAGACGCTTCCATGCGCCAACACCTCCTTGACCTTCGTGCAGTTGGAAAGCAGCTCGAAGAGTCTGGTGTTCTCAGCGAATCTCTTCTTTCGAGAAGTAATTCTTGGGGACTACATATGCCTTTAGTGTGTCCTGATGGTGCAGTGGTTGCTTATGCTTGGAAACGTCAACTAGCTGGCCAGGCTGGTGCATCTGCAGTTGACCGAACCAGGTTAGCTTTAAAGGCCTTCACGGACCAAAAAAGACGATTTTTCCCTCATCTTGAAGATGAAAATGGGTCGAATAATGAGCCTGCTCTGAAGAAGCCTTGTTTTTCTCATGGAGTGACAGATGTCAAACAAAATGAGCTTAATGATTCTAGATCACTATCAGAGATTCTAACATGTATGGAAAAGGAAGTGCCAGAGCTTAAGATTTTCACTTATGAGCGATTGGACTGGTTAAAACAAGCTTCAGCCCTTCCCTCTCAAGCAAATGAGAATTCAATAGGAGTATTGAAAGAACATAGCTATCATAGTCCTAGGATGAGCCCTGGATCACTTGGTGCTACTCCCGTTGATAAAGCTGGTGTAATTGAGTTGGTCATTCCTTCGGTTTTTAGAGCTGTAGTATCACTGCATCCAGTTGGTTCTGTTGAACCAGATGCTGTCGCTTTCTTTTCTCCTGACGAGAGAGGCAGCCATGTACATGCCAGGGGTTTTTCAAATCATCATTTGTTCAGACATGTTACGGAGCATGCTGCCACGGTGCTGCAGTATTTTCTTGGAAATCAAGCAAAAGCAGCTCTATATCCTCTATTGCTTTGGATCTGCAGCTACCAAAATTTATTTTCAAAAGCTTGTAGTAAATGTGGACAGCTGCTATCAGTAAACAAACAATCCGATTTACTGTTGCCTCCTGCCGTTCGCCCGTACAAGCAATTTTGTGCATCAAAGAACTCATCATCTGTGCCCATAACCTCATTGAAAGACCAGAAGTTGGATTCTGTTCAAGCTTTCCACATTGATTGTTTCTCAGGAGAACTATAG
Protein sequence
MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEPALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQANENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFSKACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCFSGEL
Homology
BLAST of Bhi11G001990 vs. TAIR 10
Match:
AT3G09180.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )
HSP 1 Score: 440.3 bits (1131), Expect = 1.8e-123
Identity = 235/402 (58.46%), Postives = 294/402 (73.13%), Query Frame = 0
Query: 18 NTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPL 77
N A + S DAPPKQVA AM+RL AAR+IADIRLGADR+LEA+ V +QP + PL
Sbjct: 12 NPAEAANNQSESDAPPKQVAQAMERLNQAARVIADIRLGADRILEAMFVASQPRHTDMPL 71
Query: 78 HLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWK 137
LF +EDASMRQHL DLR +GK+LEESGVL+ESL SRSNSWGLHMPLVCPDGAVVAYAWK
Sbjct: 72 QLFLREDASMRQHLQDLRLIGKKLEESGVLTESLRSRSNSWGLHMPLVCPDGAVVAYAWK 131
Query: 138 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEPALKKPCFSHGVTDVKQN 197
RQLAGQAGASAVDRTRLALKAFTDQKRRFFPH++D G EP+ KK SH + + +
Sbjct: 132 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHIDD--GLKMEPSSKKHRASHLLLENGRE 191
Query: 198 ELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQANENSIGVLKEHSYHSPR 257
E D ++L +I + +EK VP +K+ TY RL+WLK+A++LP +++ K S +
Sbjct: 192 EPVDYKTLPDIQSRLEKLVPSVKVSTYGRLNWLKRANSLPGSGSDDPTEASKPIFQSSSK 251
Query: 258 MSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFS 317
+ G L VDK VIEL PS+FRA+VSL P GSV+PDAVAFFSPDE GS++HARGFS
Sbjct: 252 LRSG-LQTEVVDKIAVIELSFPSLFRAIVSLSPAGSVDPDAVAFFSPDEGGSYLHARGFS 311
Query: 318 NHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFSKACSKCGQLLSVNKQSD 377
+H+++H+TEHAAT LQYFLG ALY LLLWICS++++FSK C+KCG+LL+++K+S
Sbjct: 312 VYHVYKHITEHAATALQYFLGFGTGTALYSLLLWICSFESVFSKPCTKCGRLLAMDKKSA 371
Query: 378 LLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDC 420
L+LPP R Y++ + N LD +A+H C
Sbjct: 372 LILPPLHRAYQELPLALN-------------LDVCEAYHSSC 397
BLAST of Bhi11G001990 vs. ExPASy Swiss-Prot
Match:
Q8RWM3 (Mediator of RNA polymerase II transcription subunit 27 OS=Arabidopsis thaliana OX=3702 GN=MED27 PE=1 SV=1)
HSP 1 Score: 440.3 bits (1131), Expect = 2.5e-122
Identity = 235/402 (58.46%), Postives = 294/402 (73.13%), Query Frame = 0
Query: 18 NTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPL 77
N A + S DAPPKQVA AM+RL AAR+IADIRLGADR+LEA+ V +QP + PL
Sbjct: 12 NPAEAANNQSESDAPPKQVAQAMERLNQAARVIADIRLGADRILEAMFVASQPRHTDMPL 71
Query: 78 HLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWK 137
LF +EDASMRQHL DLR +GK+LEESGVL+ESL SRSNSWGLHMPLVCPDGAVVAYAWK
Sbjct: 72 QLFLREDASMRQHLQDLRLIGKKLEESGVLTESLRSRSNSWGLHMPLVCPDGAVVAYAWK 131
Query: 138 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEPALKKPCFSHGVTDVKQN 197
RQLAGQAGASAVDRTRLALKAFTDQKRRFFPH++D G EP+ KK SH + + +
Sbjct: 132 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHIDD--GLKMEPSSKKHRASHLLLENGRE 191
Query: 198 ELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQANENSIGVLKEHSYHSPR 257
E D ++L +I + +EK VP +K+ TY RL+WLK+A++LP +++ K S +
Sbjct: 192 EPVDYKTLPDIQSRLEKLVPSVKVSTYGRLNWLKRANSLPGSGSDDPTEASKPIFQSSSK 251
Query: 258 MSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFS 317
+ G L VDK VIEL PS+FRA+VSL P GSV+PDAVAFFSPDE GS++HARGFS
Sbjct: 252 LRSG-LQTEVVDKIAVIELSFPSLFRAIVSLSPAGSVDPDAVAFFSPDEGGSYLHARGFS 311
Query: 318 NHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFSKACSKCGQLLSVNKQSD 377
+H+++H+TEHAAT LQYFLG ALY LLLWICS++++FSK C+KCG+LL+++K+S
Sbjct: 312 VYHVYKHITEHAATALQYFLGFGTGTALYSLLLWICSFESVFSKPCTKCGRLLAMDKKSA 371
Query: 378 LLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDC 420
L+LPP R Y++ + N LD +A+H C
Sbjct: 372 LILPPLHRAYQELPLALN-------------LDVCEAYHSSC 397
BLAST of Bhi11G001990 vs. NCBI nr
Match:
XP_038904949.1 (mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_038904950.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_038904951.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_038904952.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida])
HSP 1 Score: 840.9 bits (2171), Expect = 4.9e-240
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0
Query: 1 MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1 MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
Query: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180
HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180
Query: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240
ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240
Query: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300
NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300
Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360
FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360
Query: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420
KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF
Sbjct: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420
Query: 421 SGEL 425
SGEL
Sbjct: 421 SGEL 424
BLAST of Bhi11G001990 vs. NCBI nr
Match:
XP_008442914.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 27 [Cucumis melo])
HSP 1 Score: 790.0 bits (2039), Expect = 9.9e-225
Identity = 396/424 (93.40%), Postives = 411/424 (96.93%), Query Frame = 0
Query: 1 MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
MR QQP+QGQTATVSPNT HSP+SADDAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1 MRHIQQPSQGQTATVSPNT---HSPSSADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
Query: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
LEALCVTAQPHQS+KPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61 LEALCVTAQPHQSSKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180
HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDEN SNNEP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENASNNEP 180
Query: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240
ALKKPCFSHGVTDVKQNEL DSRSLS+IL+C+EKEVPELKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELIDSRSLSDILSCVEKEVPELKIFTYERLDWLKQASALPSQA 240
Query: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300
NENSIG LKEHSYHSPRMSPG+LGATP DKAGVIEL+IPSVFRAVVSLHP+GSVEPDA+A
Sbjct: 241 NENSIGALKEHSYHSPRMSPGALGATPADKAGVIELIIPSVFRAVVSLHPIGSVEPDALA 300
Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360
FFSPDERGSHVHARGFSN+H+FRHVTEHAATVLQYFLGNQ KAALYPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNYHVFRHVTEHAATVLQYFLGNQPKAALYPLLLWICSYQNLFS 360
Query: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420
KACSKCG+ LSVNKQSDLLLPP VRPYKQFCASKNSS+VPITSLKDQKLDSVQAFHIDCF
Sbjct: 361 KACSKCGRRLSVNKQSDLLLPPVVRPYKQFCASKNSSAVPITSLKDQKLDSVQAFHIDCF 420
Query: 421 SGEL 425
S E+
Sbjct: 421 SEEI 421
BLAST of Bhi11G001990 vs. NCBI nr
Match:
XP_004136512.1 (mediator of RNA polymerase II transcription subunit 27 isoform X1 [Cucumis sativus])
HSP 1 Score: 788.9 bits (2036), Expect = 2.2e-224
Identity = 398/424 (93.87%), Postives = 409/424 (96.46%), Query Frame = 0
Query: 1 MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
MR QQP+QGQTATVSP+T HSP S DDAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1 MRHIQQPSQGQTATVSPST---HSPPSPDDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
Query: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
LEALCVTAQPHQS+KPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61 LEALCVTAQPHQSSKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180
HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDEN SNNEP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENASNNEP 180
Query: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240
ALKKPCFSHGVTDVKQNEL DSRSLS+IL+CMEKEVPELKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELIDSRSLSDILSCMEKEVPELKIFTYERLDWLKQASALPSQA 240
Query: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300
NENSIG LKEHSYHSPRMSPG+LGATP DKAGVIEL+IPSVFRAVVSLHPVGSVEPDA+A
Sbjct: 241 NENSIGALKEHSYHSPRMSPGALGATPADKAGVIELIIPSVFRAVVSLHPVGSVEPDALA 300
Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360
FFSPDERGSHVHARGFSN+HLFRHVTEHAATVLQYFLGNQ KAALYPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFLGNQPKAALYPLLLWICSYQNLFS 360
Query: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420
KACSKCG+ LSVNKQSDLLLPPAVRPYKQFCASKNSS VPITSLKDQKLDSVQAFHIDCF
Sbjct: 361 KACSKCGRRLSVNKQSDLLLPPAVRPYKQFCASKNSSVVPITSLKDQKLDSVQAFHIDCF 420
Query: 421 SGEL 425
S E+
Sbjct: 421 SEEI 421
BLAST of Bhi11G001990 vs. NCBI nr
Match:
XP_022940393.1 (mediator of RNA polymerase II transcription subunit 27 [Cucurbita moschata])
HSP 1 Score: 760.4 bits (1962), Expect = 8.4e-216
Identity = 384/421 (91.21%), Postives = 398/421 (94.54%), Query Frame = 0
Query: 1 MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
MRQTQ PAQG TATVSP T HS SA++APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1 MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
Query: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180
HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL++ENGSN EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180
Query: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240
A KKPCFSHGVTDVKQ ELNDS SLS+ILTCMEKEVP+LKIFTYERLDWLKQASALPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
Query: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300
NENSIG LKEH+YHSPRMSP SL AT DKA VIEL+IPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGALKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360
FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+G QAKAAL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360
Query: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420
KACSKCG+LLSVNKQSDLLLPPA+RPYKQFC SK SS VP+TSLKDQKLDSVQAFHI CF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSVVPVTSLKDQKLDSVQAFHIGCF 420
Query: 421 S 422
+
Sbjct: 421 T 421
BLAST of Bhi11G001990 vs. NCBI nr
Match:
XP_023005694.1 (mediator of RNA polymerase II transcription subunit 27 [Cucurbita maxima])
HSP 1 Score: 760.0 bits (1961), Expect = 1.1e-215
Identity = 383/421 (90.97%), Postives = 398/421 (94.54%), Query Frame = 0
Query: 1 MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
MRQTQ PAQG TATVSP T HS SA++APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1 MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
Query: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180
HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL++ENGSN EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180
Query: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240
A KKPCFSHGVTDVKQ ELNDS SLS+ILTCMEKEVP+LKIFTYERLDWLKQAS LPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASVLPSQA 240
Query: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300
NENSIG LKEH+YHSPRMSP SL AT DKA VIEL+IPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGTLKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360
FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+G QAKAAL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360
Query: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420
KACSKCG+LLSVNKQSDLLLPPA+RPYKQFC SK SS+VP+TSLKDQKLDSVQAFHI CF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCF 420
Query: 421 S 422
+
Sbjct: 421 T 421
BLAST of Bhi11G001990 vs. ExPASy TrEMBL
Match:
A0A1S3B7L6 (mediator of RNA polymerase II transcription subunit 27 OS=Cucumis melo OX=3656 GN=LOC103486676 PE=3 SV=1)
HSP 1 Score: 790.0 bits (2039), Expect = 4.8e-225
Identity = 396/424 (93.40%), Postives = 411/424 (96.93%), Query Frame = 0
Query: 1 MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
MR QQP+QGQTATVSPNT HSP+SADDAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1 MRHIQQPSQGQTATVSPNT---HSPSSADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
Query: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
LEALCVTAQPHQS+KPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61 LEALCVTAQPHQSSKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180
HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDEN SNNEP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENASNNEP 180
Query: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240
ALKKPCFSHGVTDVKQNEL DSRSLS+IL+C+EKEVPELKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELIDSRSLSDILSCVEKEVPELKIFTYERLDWLKQASALPSQA 240
Query: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300
NENSIG LKEHSYHSPRMSPG+LGATP DKAGVIEL+IPSVFRAVVSLHP+GSVEPDA+A
Sbjct: 241 NENSIGALKEHSYHSPRMSPGALGATPADKAGVIELIIPSVFRAVVSLHPIGSVEPDALA 300
Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360
FFSPDERGSHVHARGFSN+H+FRHVTEHAATVLQYFLGNQ KAALYPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNYHVFRHVTEHAATVLQYFLGNQPKAALYPLLLWICSYQNLFS 360
Query: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420
KACSKCG+ LSVNKQSDLLLPP VRPYKQFCASKNSS+VPITSLKDQKLDSVQAFHIDCF
Sbjct: 361 KACSKCGRRLSVNKQSDLLLPPVVRPYKQFCASKNSSAVPITSLKDQKLDSVQAFHIDCF 420
Query: 421 SGEL 425
S E+
Sbjct: 421 SEEI 421
BLAST of Bhi11G001990 vs. ExPASy TrEMBL
Match:
A0A0A0LGT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G781560 PE=3 SV=1)
HSP 1 Score: 788.9 bits (2036), Expect = 1.1e-224
Identity = 398/424 (93.87%), Postives = 409/424 (96.46%), Query Frame = 0
Query: 1 MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
MR QQP+QGQTATVSP+T HSP S DDAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1 MRHIQQPSQGQTATVSPST---HSPPSPDDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
Query: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
LEALCVTAQPHQS+KPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61 LEALCVTAQPHQSSKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180
HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDEN SNNEP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENASNNEP 180
Query: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240
ALKKPCFSHGVTDVKQNEL DSRSLS+IL+CMEKEVPELKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELIDSRSLSDILSCMEKEVPELKIFTYERLDWLKQASALPSQA 240
Query: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300
NENSIG LKEHSYHSPRMSPG+LGATP DKAGVIEL+IPSVFRAVVSLHPVGSVEPDA+A
Sbjct: 241 NENSIGALKEHSYHSPRMSPGALGATPADKAGVIELIIPSVFRAVVSLHPVGSVEPDALA 300
Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360
FFSPDERGSHVHARGFSN+HLFRHVTEHAATVLQYFLGNQ KAALYPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFLGNQPKAALYPLLLWICSYQNLFS 360
Query: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420
KACSKCG+ LSVNKQSDLLLPPAVRPYKQFCASKNSS VPITSLKDQKLDSVQAFHIDCF
Sbjct: 361 KACSKCGRRLSVNKQSDLLLPPAVRPYKQFCASKNSSVVPITSLKDQKLDSVQAFHIDCF 420
Query: 421 SGEL 425
S E+
Sbjct: 421 SEEI 421
BLAST of Bhi11G001990 vs. ExPASy TrEMBL
Match:
A0A6J1FP59 (mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita moschata OX=3662 GN=LOC111446014 PE=3 SV=1)
HSP 1 Score: 760.4 bits (1962), Expect = 4.1e-216
Identity = 384/421 (91.21%), Postives = 398/421 (94.54%), Query Frame = 0
Query: 1 MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
MRQTQ PAQG TATVSP T HS SA++APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1 MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
Query: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180
HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL++ENGSN EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180
Query: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240
A KKPCFSHGVTDVKQ ELNDS SLS+ILTCMEKEVP+LKIFTYERLDWLKQASALPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
Query: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300
NENSIG LKEH+YHSPRMSP SL AT DKA VIEL+IPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGALKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360
FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+G QAKAAL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360
Query: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420
KACSKCG+LLSVNKQSDLLLPPA+RPYKQFC SK SS VP+TSLKDQKLDSVQAFHI CF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSVVPVTSLKDQKLDSVQAFHIGCF 420
Query: 421 S 422
+
Sbjct: 421 T 421
BLAST of Bhi11G001990 vs. ExPASy TrEMBL
Match:
A0A6J1KZZ9 (mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita maxima OX=3661 GN=LOC111498620 PE=3 SV=1)
HSP 1 Score: 760.0 bits (1961), Expect = 5.3e-216
Identity = 383/421 (90.97%), Postives = 398/421 (94.54%), Query Frame = 0
Query: 1 MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
MRQTQ PAQG TATVSP T HS SA++APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1 MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
Query: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180
HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL++ENGSN EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180
Query: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240
A KKPCFSHGVTDVKQ ELNDS SLS+ILTCMEKEVP+LKIFTYERLDWLKQAS LPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASVLPSQA 240
Query: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300
NENSIG LKEH+YHSPRMSP SL AT DKA VIEL+IPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGTLKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360
FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+G QAKAAL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360
Query: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420
KACSKCG+LLSVNKQSDLLLPPA+RPYKQFC SK SS+VP+TSLKDQKLDSVQAFHI CF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCF 420
Query: 421 S 422
+
Sbjct: 421 T 421
BLAST of Bhi11G001990 vs. ExPASy TrEMBL
Match:
A0A6J1DC62 (mediator of RNA polymerase II transcription subunit 27 OS=Momordica charantia OX=3673 GN=LOC111019372 PE=3 SV=1)
HSP 1 Score: 740.0 bits (1909), Expect = 5.7e-210
Identity = 372/424 (87.74%), Postives = 395/424 (93.16%), Query Frame = 0
Query: 1 MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60
MRQTQQPAQGQTATVSPNTA PHS SA++APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1 MRQTQQPAQGQTATVSPNTAAPHSGGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
Query: 61 LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
LEALCVTA PHQSTKPLHLFQKED SMRQHL DLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61 LEALCVTAHPHQSTKPLHLFQKEDDSMRQHLRDLRAVGKQLEESGVLSESLLSRSNSWGL 120
Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180
HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DE+ N EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDESRLNLEP 180
Query: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240
ALKKPCFSHGVT++KQ+ELN+ R+LS+ILTCMEKEVP+LKIFTYERLDWLKQA AL SQA
Sbjct: 181 ALKKPCFSHGVTEIKQDELNEPRTLSDILTCMEKEVPDLKIFTYERLDWLKQAPALSSQA 240
Query: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300
N+NSIG LKEH+YHSPRM PGSL A+ DK VIEL+IPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NDNSIGALKEHNYHSPRMGPGSLAASSKDKVSVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360
FF+PDERGS+VHARGFS HHLFRHVTEHAATVLQYFLG Q KAALYPLLLWICSYQNLFS
Sbjct: 301 FFAPDERGSYVHARGFSVHHLFRHVTEHAATVLQYFLGIQEKAALYPLLLWICSYQNLFS 360
Query: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420
KACSKCG+LLSVNKQSDLLLPPA+RPYKQFC S+ S+VPI+SLKDQ+ D VQAFHI CF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSRVLSAVPISSLKDQRSDPVQAFHIGCF 420
Query: 421 SGEL 425
S EL
Sbjct: 421 SEEL 424
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
AT3G09180.1 | 1.8e-123 | 58.46 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627);... | [more] |
Match Name | E-value | Identity | Description | |
Q8RWM3 | 2.5e-122 | 58.46 | Mediator of RNA polymerase II transcription subunit 27 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
XP_038904949.1 | 4.9e-240 | 100.00 | mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_0... | [more] |
XP_008442914.1 | 9.9e-225 | 93.40 | PREDICTED: mediator of RNA polymerase II transcription subunit 27 [Cucumis melo] | [more] |
XP_004136512.1 | 2.2e-224 | 93.87 | mediator of RNA polymerase II transcription subunit 27 isoform X1 [Cucumis sativ... | [more] |
XP_022940393.1 | 8.4e-216 | 91.21 | mediator of RNA polymerase II transcription subunit 27 [Cucurbita moschata] | [more] |
XP_023005694.1 | 1.1e-215 | 90.97 | mediator of RNA polymerase II transcription subunit 27 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3B7L6 | 4.8e-225 | 93.40 | mediator of RNA polymerase II transcription subunit 27 OS=Cucumis melo OX=3656 G... | [more] |
A0A0A0LGT1 | 1.1e-224 | 93.87 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G781560 PE=3 SV=1 | [more] |
A0A6J1FP59 | 4.1e-216 | 91.21 | mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita moschata OX=... | [more] |
A0A6J1KZZ9 | 5.3e-216 | 90.97 | mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita maxima OX=36... | [more] |
A0A6J1DC62 | 5.7e-210 | 87.74 | mediator of RNA polymerase II transcription subunit 27 OS=Momordica charantia OX... | [more] |