Bhi11G001974 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G001974
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	33 kDa ribonucleoprotein, chloroplastic
Location	chr11: 64365641 .. 64369883 (+)
RNA-Seq Expression	Bhi11G001974
Synteny	Bhi11G001974

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTGCTGGTTTTTTTTTCATAAAGTAGAGAAAAAAAAAATCCGATCAAAGCAACCTTATCCAGTTAGATTATCATCTTTGAATTTCTGAAGCTCCCCAATCCCCAAGGGCTTCCCGGAGCAGAAATCCATCCCTACCACTTGGGGATTCCACCATTTCCACTTTCTTCTTCAAATGTCAGCTTCTTCTGTCTCAATGGCTGCTGCAGCAGCACCCTCAGTTTCATCTTCTTCTCCACTCAGCAAGAAACTCTTCTTCACTCAACATCCCAACCAAATTCCCTCTCATTTCTCTCCAAAACAAAACCCATTGAAGCTTCTCAACCTCACAATCCATTTACCCAACTTTTACCCTCTTTCCTTCTCCTCTCCTTCTCATCTCCACAGTGTACCTCCTGCTTTCGATGGGCTCGAAGTCTCCGACCCAGAAACAGAATACGCAGAGATTCAAGAATCGGATGCAGAAGAAGAAACCCAAGAGGAAGATGAACAAAAGGTATCGGTATCTCGCGAAGCAGGGAAGCTTTATATTGGAAATTTACCATATGCTATGACTTCTTCCCAATTGTCTGAGGTCTTCGCCGAAGCTGGTCATGTGGTTTCTGTACAGGTTTGTGATTAATTTTTTTTTTTTTTTTTTGCTCTGAATATTCTGAATCGATTCTTTTAGGGCTAATCGGAACTGTTTACCCATTGTTGGTTTCTTATGTGATTATCTTCTGAATCTTCTGTTAGGTTATATATGACAAAGTTACGGATAGGAGTAGGGGATTTGCATTTGTGACAATGGCAACTTTGGAGGAAGCTAAAGAAGCAATTCGGATGTTTGATGGCTCTGTAATTACTAATATTCTCTCTCTTTTTCATTTTATTTTCTTTTATAGCTTAAGAATTGTGGAGATTAACTTTGAAGTTGAAAACAGTGGTTAGAAACTAGGGATGGGTATCCACAGTTCTAGCTGTTAGCTTAACTTACAAGTGGCTGTTACTTTTTTATGGGTCGATAGAAGCAAGGATGAAAATATCTCGATATATTGACGATATATCCGTGATATATCCGTAAAATCATATATCTGATAAAGATATTGAGGGATAAGATCTTTTCTCTTCGAATTTCATGATATATCGGCGATATTAACGACATATCTTTGATATATCTTTTTGGGCTAACATCTTTTGCAGCTCAACAAAATTGTGGATATTTTTGGATATATCGTAGATATTTTATGGATATATCGTGAAAATATCGTGGATATTTCGTCTGGTTATCTCTACATATCTTTTTTTTTTCTTTTTCCAATATCAAGCTTTTCCAATGTGCTACTTTTTCTAATTTTCAAATTTTTTGAATTTTCAAGCCAAAACTTTTATTTTCTTAGAAATTAAATTTGGAGAAACCACAAAAAAGACTTACACCATGGCCAAAAGTGGGTGGAGTAGGAATTAGTCTCACCGTTGGAGAATCTCAATTCATGGATGCCATCCATGATCATAGAGTTGGTGGACTAGGCAATAGGAAAATCTTTCTTTCATAGAAGATCCATACATGATGATGCTTATATTGAGGCGACTCACTTGTTTCAAGTATAAAGGAATGGTTTGGACAGTCGATATGGACATGGTCAATAGGTCTATAACAATAGTAATTATGACTATTCTCATAGTAAATATAGTCATTCAAGTGATTATGGTTCCTGTGGTTATAGTGATGGGTTTAAGGCATCAATCTATACACGAAAACAACTTCCTCGTGAAAGTGATGAAGACTTAGACTTGGAGCCTTTATGTTATTTACATTCTTCAAGCCGTCCTCTGAATTTAACATAGTTTGATCAAAAGTATCCTAGCATTGAAGTTGATGGTGAGATTCATGGAAGACATACTTCCAATTATGCTATAAATTTTTAACATACAATGAGTTGGGAATATCATTATCAAATGAATTATGGTAATGTTGGACTAGTACCTATTAGATCATCTTTTTATTATTGAATCTTGTATTTGACCTTCATTTTATGTGACCTAGACTTTATTAATAAAATATTCAGTTCATAATAATTTTTTTGATCTTCATTATTAAGTATTATTCCATTATTAGACATATTTAGCTTCTAATTATTGATTTATATGCTAAAAGTCATAGCTTATTACTTAAATAAGTTTGTTCTAAAATTTCACAAAAAAATTCACAATATTTTTATGAATTTTCGTGATATCTGTGTTTTTTCTTAGAATATCCATCAACATTTAAATATCCGTAAATCTGACTTACCAATATTTACACTGATAATGATATTTCATCCTTGGATAGAAGGGCAATGTTTGGTGACAGGTTTTTTTTTCTTTCTTTCTATTTTCTCATGCATTTGGCTCGAGAGGAACAATAAGTTATTTAAAAAGGTGGAAATGTCGTGTGCAAAGCTTTAGGGGTGGTGAGTTTTTTTACAATAATTGTGAAAATGGGGGATCGAATCTCCGGCCTCTATAGAAGAAGATCATGCCAAATTGCCAATTACCATTGAACTATACTCATTTGAGATTTTAATGCCTCTTATTGGCGTGGTCACTAGGCGTTATTGTAATCATGATATTAGTTTCTTTTCGGTTAATTGAGCCATTGCCCATTGGCATAACATGGTGTCTCCACAAATATTCTGCAATGGCATTGTTGGTGCCTTTGTTGAATTAGATGATATTAATGTTAAGTGTTAGACATTAAAGGGGGTGCTGATGATTCTTTTCTAATACAGTAGTCACAAATAGACTACAAATTGTCAGTCTAATAGTTTTGATATCACGGTATGATGTCTCTATATGATTGAGAAATTTATTGATAGTGTACAATATTCAAGATTGCCATAATGTTGCTAACGGTTGCACTACTTGTCAGCAAATCGGTGGTCGAACCGTTCGGGTGAACTTCCCTGAAGTGCCAAGGGGAGGAGAAAAGGAAGTCATGGGGCCAAAGATAAGAAGCAGCTATAACAAATTTGTAGATAGTCCTCACAAGATATATGCAGGGAACCTTGGTTGGGGTCTCACTTCTCAGAGTCTTAGAGAGGCTTTTGAAAACCAACCGGGGATATTGAGTGCCAAGGTCATCTATGATAGGGCATCTGGAAAAAGTAGAGGTTTTGGATTTGTATCTTTTGAAACTGCTGAGGATGCAGAGTTTGCTTTGGAGTCCATGAATGGAGTGGTAAGGAAGTGGAATTACTTTCTAAAAGAATGAGAATCTAGAATTAATATCTAAACAGAGTAGTTGCCAATATGATTCTAGAAGAAGACAACTTGAACATGTGACAGAATTTACTAATGTGATTGATCCCCAGCTACATTATTATTTTTTAACTACCTCTAAATGGGCTCATATTAACATAAACCTTGCAAACCGAAAAAGTCATGAGAAAATGTACCTGCTGTGTATTCAGTCCCGTGTTATAGATACAAGTCACACATTGACCTCTTCCTATGCAAATATGCAAACAGGAAGTTGAAGGGCGGCCGCTTCGTTTGAACATTGCTGCAGGACGGGCCCCAACTTCTCCAGCAGCATTCCCAAGGACCGAGAATACCATTGACAGCAAAGAATTGCTTACAAGTATCAGTGCCTGAAATCTGATGATGAAAATTAAACTGAAATTGAAGGCTAAGGAAATTGTTCTGCAAATTGCACAGATTCAGGTCATCCGTCGAAATTTTCTTTCATTCCTTGCTCAACTACCAAGGAAGGCCTAGATTTTTTCATTGAGTGGTGTGAGTTGAGGGAAAGTGTGAAAATGTTGCCATGGGTTAACGAGTTTTTTATGTATGACTTGAGAATTGGACTACATGTCTCTTTGCTGAGTTAATACTATAATATTCATCTCTCGGCCTTTTCTTACCTTATCTTTGCTATTTATCACTACAAGTTTTCAACTACTGATTGTTTGTCGTCTCTCTCTCTCGCCCCCTCCCTCATGAGAATTAACAATTTAAGTGTAAAAAAATCTCTTAAGAAAAAAAGGAGACAGAAAAACTGGAGCATCGGTAATGAAAGAAAAGTTAACATATTGGAGAAAAATGTGCTTCTGCTTCCAAAACTAATGGTGTGTAAAAATAATAAGAGTTTTAACAAAAAGTAGGTTTCAGATTTATACTAAATTTTTTCATCAAGATCATGAGAACCAGCAAGGAGAGCATCTGCTGCCGAGTCCAGGTCTTGAGGAAAGAAAACTCTGCAAAATAAAGCAACACGAGTAG

mRNA sequence

ATTTTTGCTGGTTTTTTTTTCATAAAGTAGAGAAAAAAAAAATCCGATCAAAGCAACCTTATCCAGTTAGATTATCATCTTTGAATTTCTGAAGCTCCCCAATCCCCAAGGGCTTCCCGGAGCAGAAATCCATCCCTACCACTTGGGGATTCCACCATTTCCACTTTCTTCTTCAAATGTCAGCTTCTTCTGTCTCAATGGCTGCTGCAGCAGCACCCTCAGTTTCATCTTCTTCTCCACTCAGCAAGAAACTCTTCTTCACTCAACATCCCAACCAAATTCCCTCTCATTTCTCTCCAAAACAAAACCCATTGAAGCTTCTCAACCTCACAATCCATTTACCCAACTTTTACCCTCTTTCCTTCTCCTCTCCTTCTCATCTCCACAGTGTACCTCCTGCTTTCGATGGGCTCGAAGTCTCCGACCCAGAAACAGAATACGCAGAGATTCAAGAATCGGATGCAGAAGAAGAAACCCAAGAGGAAGATGAACAAAAGGTATCGGTATCTCGCGAAGCAGGGAAGCTTTATATTGGAAATTTACCATATGCTATGACTTCTTCCCAATTGTCTGAGGTCTTCGCCGAAGCTGGTCATGTGGTTTCTGTACAGGTTATATATGACAAAGTTACGGATAGGAGTAGGGGATTTGCATTTGTGACAATGGCAACTTTGGAGGAAGCTAAAGAAGCAATTCGGATGTTTGATGGCTCTCAAATCGGTGGTCGAACCGTTCGGGTGAACTTCCCTGAAGTGCCAAGGGGAGGAGAAAAGGAAGTCATGGGGCCAAAGATAAGAAGCAGCTATAACAAATTTGTAGATAGTCCTCACAAGATATATGCAGGGAACCTTGGTTGGGGTCTCACTTCTCAGAGTCTTAGAGAGGCTTTTGAAAACCAACCGGGGATATTGAGTGCCAAGGTCATCTATGATAGGGCATCTGGAAAAAGTAGAGGTTTTGGATTTGTATCTTTTGAAACTGCTGAGGATGCAGAGTTTGCTTTGGAGTCCATGAATGGAGTGGAAGTTGAAGGGCGGCCGCTTCGTTTGAACATTGCTGCAGGACGGGCCCCAACTTCTCCAGCAGCATTCCCAAGGACCGAGAATACCATTGACAGCAAAGAATTGCTTACAAGTATCAGTGCCTGAAATCTGATGATGAAAATTAAACTGAAATTGAAGGCTAAGGAAATTGTTCTGCAAATTGCACAGATTCAGGTCATCCGTCGAAATTTTCTTTCATTCCTTGCTCAACTACCAAGGAAGGCCTAGATTTTTTCATTGAGTGGTGTGAGTTGAGGGAAAGTGTGAAAATGTTGCCATGGGTTAACGAGTTTTTTATGTATGACTTGAGAATTGGACTACATGTCTCTTTGCTGAGTTAATACTATAATATTCATCTCTCGGCCTTTTCTTACCTTATCTTTGCTATTTATCACTACAAGTTTTCAACTACTGATTGTTTGTCGTCTCTCTCTCTCGCCCCCTCCCTCATGAGAATTAACAATTTAAGTGTAAAAAAATCTCTTAAGAAAAAAAGGAGACAGAAAAACTGGAGCATCGGTAATGAAAGAAAAGTTAACATATTGGAGAAAAATGTGCTTCTGCTTCCAAAACTAATGGTGTGTAAAAATAATAAGAGTTTTAACAAAAAGTAGGTTTCAGATTTATACTAAATTTTTTCATCAAGATCATGAGAACCAGCAAGGAGAGCATCTGCTGCCGAGTCCAGGTCTTGAGGAAAGAAAACTCTGCAAAATAAAGCAACACGAGTAG

Coding sequence (CDS)

ATGTCAGCTTCTTCTGTCTCAATGGCTGCTGCAGCAGCACCCTCAGTTTCATCTTCTTCTCCACTCAGCAAGAAACTCTTCTTCACTCAACATCCCAACCAAATTCCCTCTCATTTCTCTCCAAAACAAAACCCATTGAAGCTTCTCAACCTCACAATCCATTTACCCAACTTTTACCCTCTTTCCTTCTCCTCTCCTTCTCATCTCCACAGTGTACCTCCTGCTTTCGATGGGCTCGAAGTCTCCGACCCAGAAACAGAATACGCAGAGATTCAAGAATCGGATGCAGAAGAAGAAACCCAAGAGGAAGATGAACAAAAGGTATCGGTATCTCGCGAAGCAGGGAAGCTTTATATTGGAAATTTACCATATGCTATGACTTCTTCCCAATTGTCTGAGGTCTTCGCCGAAGCTGGTCATGTGGTTTCTGTACAGGTTATATATGACAAAGTTACGGATAGGAGTAGGGGATTTGCATTTGTGACAATGGCAACTTTGGAGGAAGCTAAAGAAGCAATTCGGATGTTTGATGGCTCTCAAATCGGTGGTCGAACCGTTCGGGTGAACTTCCCTGAAGTGCCAAGGGGAGGAGAAAAGGAAGTCATGGGGCCAAAGATAAGAAGCAGCTATAACAAATTTGTAGATAGTCCTCACAAGATATATGCAGGGAACCTTGGTTGGGGTCTCACTTCTCAGAGTCTTAGAGAGGCTTTTGAAAACCAACCGGGGATATTGAGTGCCAAGGTCATCTATGATAGGGCATCTGGAAAAAGTAGAGGTTTTGGATTTGTATCTTTTGAAACTGCTGAGGATGCAGAGTTTGCTTTGGAGTCCATGAATGGAGTGGAAGTTGAAGGGCGGCCGCTTCGTTTGAACATTGCTGCAGGACGGGCCCCAACTTCTCCAGCAGCATTCCCAAGGACCGAGAATACCATTGACAGCAAAGAATTGCTTACAAGTATCAGTGCCTGA

Protein sequence

MSASSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYPLSFSSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPTSPAAFPRTENTIDSKELLTSISA

Homology

[Close]

BLAST of Bhi11G001974 vs. TAIR 10
Match: AT3G52380.1 (chloroplast RNA-binding protein 33 )

HSP 1 Score: 292.0 bits (746), Expect = 6.0e-79
Identity = 171/337 (50.74%), Postives = 226/337 (67.06%), Query Frame = 0


Query: 1   MSASSVSMAAAAAPSVSSSSPLSKKLFFTQHPN-QIPSHFSPKQNPLKLLNLTIHLPNFY 60
           MS++  S A A + + ++SS  +     + H N Q+   F+PK        L  + PN  
Sbjct: 1   MSSAYCSSAVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKS-----FKLVANCPN-- 60

Query: 61  PLSFSSPSHLH--------SVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVS 120
           PL   S    H            A D ++ S  E E  E +E D  EE  EE++Q    S
Sbjct: 61  PLILHSNIRRHRFFCAAETEASSADDEIQASVEEEEEVE-EEGDEGEEEVEEEKQTTQAS 120

Query: 121 REAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKE 180
            E G+LY+GNLPY +TSS+LS++F EAG VV VQ++YDKVTDRSRGF FVTM ++EEAKE
Sbjct: 121 GEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKE 180

Query: 181 AIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTS 240
           A++MF+ SQIGGRTV+VNFPEVPRGGE EVM  KIR +   +VDSPHK+YAGNLGW LTS
Sbjct: 181 AMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTS 240

Query: 241 QSLREAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRL 300
           Q L++AF +QPG+L AKVIY+R +G+SRGFGF+SFE+AE+ + AL +MNGVEVEGR LRL
Sbjct: 241 QGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRL 300

Query: 301 NIAAGR-----APTSPAAFPRTENTIDSKELLTSISA 324
           N+A+ R     +P S       E +++S E+L+++SA
Sbjct: 301 NLASEREKPTVSPPSVEEGETEEASLESNEVLSNVSA 329

[Close]

BLAST of Bhi11G001974 vs. TAIR 10
Match: AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 152.5 bits (384), Expect = 5.7e-37
Identity = 94/280 (33.57%), Postives = 158/280 (56.43%), Query Frame = 0


Query: 49  LNLTIHLPNFYPLSFSSPSHLHSVPPAF------DGLEVS------DPETEYAEIQESDA 108
           L L+   P   P   S P+ +  + P+       D +  S       P + +A      +
Sbjct: 8   LALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVAITS 67

Query: 109 EEETQEEDEQKVSVSREAG-----KLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKV 168
           E E +E+    V+  +E       KL++GNLP+ + S+QL+++F  AG+V  V+VIYDK+
Sbjct: 68  EFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKI 127

Query: 169 TDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNF-PEVPRGGEKEVMGPKIRSSY 228
           T RSRGF FVTM+++ E + A + F+G ++ GR +RVN  P  P+  +    GP  RSS+
Sbjct: 128 TGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGP--RSSF 187

Query: 229 NKF-----------VDSPHKIYAGNLGWGLTSQSLREAFENQPGILSAKVIYDRASGKSR 288
                           S +++Y GNL WG+   +L   F  Q  ++ A+VIYDR SG+S+
Sbjct: 188 GSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSK 247

Query: 289 GFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAP 300
           GFGFV+++++++ + A++S++G +++GR +R++ A  R P
Sbjct: 248 GFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPP 285

[Close]

BLAST of Bhi11G001974 vs. TAIR 10
Match: AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 142.1 bits (357), Expect = 7.7e-34
Identity = 73/203 (35.96%), Postives = 126/203 (62.07%), Query Frame = 0


Query: 98  EETQEEDEQKVSVSREAG---KLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDR 157
           EE +++D     +   A    KLY GNLPY + S+ L+++  +  +   V+V+Y++ T +
Sbjct: 65  EEEEKDDGASAVLDPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQ 124

Query: 158 SRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFV 217
           SRGFAFVTM+ +E+    I   DG++  GR ++VNF + P+  ++ +           + 
Sbjct: 125 SRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPKPNKEPL-----------YP 184

Query: 218 DSPHKIYAGNLGWGLTSQSLREAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAEF 277
           ++ HK++ GNL W +TS+SL  AF     ++ A+V++D  +G+SRG+GFV + +  + E 
Sbjct: 185 ETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMET 244

Query: 278 ALESMNGVEVEGRPLRLNIAAGR 298
           ALES++G E+EGR +R+N+A G+
Sbjct: 245 ALESLDGFELEGRAIRVNLAQGK 256

[Close]

BLAST of Bhi11G001974 vs. TAIR 10
Match: AT3G52150.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 137.1 bits (344), Expect = 2.5e-32
Identity = 75/199 (37.69%), Postives = 118/199 (59.30%), Query Frame = 0


Query: 96  AEEETQEEDEQKVSVSREAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRS 155
           A  ET+E+       S  A ++YIGN+P  +T+ QL+++  E G V  VQV+YDK + RS
Sbjct: 57  AVTETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRS 116

Query: 156 RGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVD 215
           R F F TM ++E+A   +   +G+ + GR ++VN  E P     ++    ++S  + FVD
Sbjct: 117 RRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSPDL--SVLQSEDSAFVD 176

Query: 216 SPHKIYAGNLGWGLTSQSLREAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFA 275
           SP+K+Y GNL   +T + L   F  +  ++SAKV     + KS GFGFV+F + ED E A
Sbjct: 177 SPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAA 236

Query: 276 LESMNGVEVEGRPLRLNIA 295
           + ++N   +EG+ +R+N A
Sbjct: 237 IVALNNSLLEGQKIRVNKA 253

[Close]

BLAST of Bhi11G001974 vs. TAIR 10
Match: AT3G52150.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 137.1 bits (344), Expect = 2.5e-32
Identity = 75/199 (37.69%), Postives = 118/199 (59.30%), Query Frame = 0


Query: 96  AEEETQEEDEQKVSVSREAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRS 155
           A  ET+E+       S  A ++YIGN+P  +T+ QL+++  E G V  VQV+YDK + RS
Sbjct: 57  AVTETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRS 116

Query: 156 RGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVD 215
           R F F TM ++E+A   +   +G+ + GR ++VN  E P     ++    ++S  + FVD
Sbjct: 117 RRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSPDL--SVLQSEDSAFVD 176

Query: 216 SPHKIYAGNLGWGLTSQSLREAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFA 275
           SP+K+Y GNL   +T + L   F  +  ++SAKV     + KS GFGFV+F + ED E A
Sbjct: 177 SPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAA 236

Query: 276 LESMNGVEVEGRPLRLNIA 295
           + ++N   +EG+ +R+N A
Sbjct: 237 IVALNNSLLEGQKIRVNKA 253

[Close]

BLAST of Bhi11G001974 vs. ExPASy Swiss-Prot
Match: P19684 (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.5e-82
Identity = 178/336 (52.98%), Postives = 229/336 (68.15%), Query Frame = 0


Query: 1   MSASSVSMAAAAAPSVSSSSPLSKKLFFTQHP---------NQIPSHFSPKQNPLKLLNL 60
           MS    S AA A     S+S  S    FTQ P         +   +HF+ K N  K    
Sbjct: 1   MSGCCFSFAATA-----STSSTSLLYLFTQKPKFSVDHLSLSTYNTHFNFKINSTK---- 60

Query: 61  TIHLPNFYPLS--FSSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVS 120
              L   +P+S  + S   L +     DG+EV   + E      ++ EEE +E++E+  S
Sbjct: 61  ---LKAHFPISSLYRSSIFLSTCASVSDGVEVVQEDDEEEVALSAEEEEEIEEKEERVES 120

Query: 121 VSREAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEA 180
            S E G+LY+GNLP++MTSSQLSE+FAEAG V +V+++YD+VTDRSRGFAFVTM ++EEA
Sbjct: 121 ESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEA 180

Query: 181 KEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL 240
           KEAIR+FDGSQ+GGRTV+VNFPEVPRGGE+EVM  KIRS+Y  FVDSPHK+Y  NL W L
Sbjct: 181 KEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWAL 240

Query: 241 TSQSLREAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPL 300
           TSQ LR+AF +QPG +SAKVIYDR+SG+SRGFGF++F +AE    AL++MN VE+EGRPL
Sbjct: 241 TSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPL 300

Query: 301 RLNIAAGRAPTS--PAAFPRTENTIDSKELLTSISA 324
           RLN+A  +AP S  P      EN  D+ ELL+S+S+
Sbjct: 301 RLNVAGQKAPVSSPPVVETSPENDSDNSELLSSLSS 324

[Close]

BLAST of Bhi11G001974 vs. ExPASy Swiss-Prot
Match: Q39061 (RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 8.5e-78
Identity = 171/337 (50.74%), Postives = 226/337 (67.06%), Query Frame = 0


Query: 1   MSASSVSMAAAAAPSVSSSSPLSKKLFFTQHPN-QIPSHFSPKQNPLKLLNLTIHLPNFY 60
           MS++  S A A + + ++SS  +     + H N Q+   F+PK        L  + PN  
Sbjct: 1   MSSAYCSSAVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKS-----FKLVANCPN-- 60

Query: 61  PLSFSSPSHLH--------SVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVS 120
           PL   S    H            A D ++ S  E E  E +E D  EE  EE++Q    S
Sbjct: 61  PLILHSNIRRHRFFCAAETEASSADDEIQASVEEEEEVE-EEGDEGEEEVEEEKQTTQAS 120

Query: 121 REAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKE 180
            E G+LY+GNLPY +TSS+LS++F EAG VV VQ++YDKVTDRSRGF FVTM ++EEAKE
Sbjct: 121 GEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKE 180

Query: 181 AIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTS 240
           A++MF+ SQIGGRTV+VNFPEVPRGGE EVM  KIR +   +VDSPHK+YAGNLGW LTS
Sbjct: 181 AMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTS 240

Query: 241 QSLREAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRL 300
           Q L++AF +QPG+L AKVIY+R +G+SRGFGF+SFE+AE+ + AL +MNGVEVEGR LRL
Sbjct: 241 QGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRL 300

Query: 301 NIAAGR-----APTSPAAFPRTENTIDSKELLTSISA 324
           N+A+ R     +P S       E +++S E+L+++SA
Sbjct: 301 NLASEREKPTVSPPSVEEGETEEASLESNEVLSNVSA 329

[Close]

BLAST of Bhi11G001974 vs. ExPASy Swiss-Prot
Match: Q08935 (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-38
Identity = 97/264 (36.74%), Postives = 156/264 (59.09%), Query Frame = 0


Query: 46  LKLLNLTIHLPNFYPLSFSSPSHLHSVPPAFDGLEVSDPETEYAE-------IQESDAEE 105
           L L   T+ LP   P S ++     S+PP+   L +S   + ++        + + D  E
Sbjct: 11  LSLTPQTLPLPK--PTSQTTSLSFFSLPPSSLNLSLSSSSSCFSSRFVRKVTLSDFDQIE 70

Query: 106 ETQEED---EQKVSVSREAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRS 165
           + ++ D   E++ + S +  K+++GNLP++  S+ L+E+F  AG+V  V+VIYDK+T RS
Sbjct: 71  DVEDGDDGVEEERNFSPDL-KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRS 130

Query: 166 RGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVD 225
           RGF FVTM++ EE + A + F+G ++ GR +RVN    P   E        R   +   D
Sbjct: 131 RGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGS--FD 190

Query: 226 SPHKIYAGNLGWGLTSQSLREAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFA 285
           S +++Y GNL WG+   +L   F  Q  ++ AKV+YDR SG+SRGFGFV++ +AE+   A
Sbjct: 191 SSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNA 250

Query: 286 LESMNGVEVEGRPLRLNIAAGRAP 300
           +ES++GV++ GR +R++ A  R P
Sbjct: 251 IESLDGVDLNGRAIRVSPAEARPP 269

[Close]

BLAST of Bhi11G001974 vs. ExPASy Swiss-Prot
Match: Q08937 (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.8e-38
Identity = 103/286 (36.01%), Postives = 162/286 (56.64%), Query Frame = 0


Query: 40  SPKQNPLKLLNLTIHLPNFYPLSFSSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEE 99
           S   + L+ L +T   P+   L  +S     S+P +   L +S   T    I+  ++   
Sbjct: 3   SSSVSSLQFLFVTPQTPS--SLKPNSTLSFFSLPSSSLNLSLSSSSTGLCSIKPFESSFS 62

Query: 100 T--------QEEDEQKVSVS---REAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIY 159
           T        Q ED+ +V+      E  KL++GNLP+++ S+ L+ +F  AG+V  V+VIY
Sbjct: 63  TRVALSGFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIY 122

Query: 160 DKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVP-----------RGG 219
           DK+T RSRGF FVTM+T EE + A + F+G +I GR +RVN    P           RGG
Sbjct: 123 DKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGG 182

Query: 220 EKEVMGPKIRSSY------NKFVDSPHKIYAGNLGWGLTSQSLREAFENQPGILSAKVIY 279
                G +  +S        + VDS +++Y GNL WG+   +L+E F  Q  ++ AKV+Y
Sbjct: 183 NSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVY 242

Query: 280 DRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGR 298
           DR SG+SRGFGFV++ ++++   A++S+NGV+++GR +R++ A  R
Sbjct: 243 DRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER 286

[Close]

BLAST of Bhi11G001974 vs. ExPASy Swiss-Prot
Match: P49313 (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-37
Identity = 99/270 (36.67%), Postives = 155/270 (57.41%), Query Frame = 0


Query: 46  LKLLNLTIHLPNFYPLSFSSPSHLHSVPPAFDGLEVSDPETEYAE-------IQESDAEE 105
           L L   T+ LP   P S ++     S+PP+   L +S P + ++        + + D  E
Sbjct: 11  LSLTPQTLLLPK--PTSQTTSLSFFSLPPSSLNLSLSSPSSCFSSRFVRKVTLPDFDQIE 70

Query: 106 ETQEEDEQKVSVSREAG-----KLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTD 165
           + ++ DE    V  E       K+++GNL ++  S+ L+E+F  AG+V  V+VIYDK+T 
Sbjct: 71  DVEDGDE---GVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTG 130

Query: 166 RSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGE----KEVMGPKIRSS 225
           RSRGF FVTM++ EE + A + F+G ++ GR +RVN    P   E    +E    +  S 
Sbjct: 131 RSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSR 190

Query: 226 YNKFVDSPHKIYAGNLGWGLTSQSLREAFENQPGILSAKVIYDRASGKSRGFGFVSFETA 285
                DS +++Y GNL WG+   +L   F  Q  ++ AKV+YDR SG+SRGFGFV++ +A
Sbjct: 191 GGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSA 250

Query: 286 EDAEFALESMNGVEVEGRPLRLNIAAGRAP 300
           E+   A+ES++GV++ GR +R++ A  R P
Sbjct: 251 EEVNNAIESLDGVDLNGRAIRVSPAEARPP 275

[Close]

BLAST of Bhi11G001974 vs. NCBI nr
Match: XP_038904039.1 (33 kDa ribonucleoprotein, chloroplastic [Benincasa hispida])

HSP 1 Score: 615.9 bits (1587), Expect = 2.0e-172
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0


Query: 1   MSASSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYP 60
           MSASSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYP
Sbjct: 1   MSASSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYP 60

Query: 61  LSFSSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIG 120
           LSFSSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIG
Sbjct: 61  LSFSSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIG 120

Query: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
           NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ
Sbjct: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180

Query: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEN 240
           IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEN
Sbjct: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEN 240

Query: 241 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPT 300
           QPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPT
Sbjct: 241 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPT 300

Query: 301 SPAAFPRTENTIDSKELLTSISA 324
           SPAAFPRTENTIDSKELLTSISA
Sbjct: 301 SPAAFPRTENTIDSKELLTSISA 323

[Close]

BLAST of Bhi11G001974 vs. NCBI nr
Match: XP_008442930.1 (PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Cucumis melo])

HSP 1 Score: 562.4 bits (1448), Expect = 2.6e-156
Identity = 293/320 (91.56%), Postives = 304/320 (95.00%), Query Frame = 0


Query: 4   SSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYPLSF 63
           S+ S+AAAAA + +SSSPL KK FFTQHPNQIPSHFSPK N LKLLNLTIHLPNFYPLSF
Sbjct: 2   SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 61

Query: 64  SSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIGNLP 123
           SS SH+H  PPAFD LE+SDPETEY ++QESD EE+TQEEDEQK+SVSREAGKLYIGNLP
Sbjct: 62  SSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 121

Query: 124 YAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 183
           YAMTSSQLSEVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 122 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 181

Query: 184 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFENQPG 243
           RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR+AFENQPG
Sbjct: 182 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 241

Query: 244 ILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPTSPA 303
           ILSAKVIYDRASGKSRGFGFVSFETAEDAE ALESMNGVEVEGRPLRLNIAA RAPTSPA
Sbjct: 242 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 301

Query: 304 AFPRTENTIDSKELLTSISA 324
           AFPRTENTIDSKELLTSISA
Sbjct: 302 AFPRTENTIDSKELLTSISA 321

[Close]

BLAST of Bhi11G001974 vs. NCBI nr
Match: TYK25330.1 (33 kDa ribonucleoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 562.0 bits (1447), Expect = 3.3e-156
Identity = 293/320 (91.56%), Postives = 304/320 (95.00%), Query Frame = 0


Query: 4   SSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYPLSF 63
           S+ S+AAAAA + +SSSPL KK FFTQHPNQIPSHFSPK N LKLLNLTIHLPNFYPLSF
Sbjct: 2   SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 61

Query: 64  SSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIGNLP 123
           SS SH+H  PPAFD LE+SDPETEY ++QESD EE+TQEEDEQK+SVSREAGKLYIGNLP
Sbjct: 62  SSVSHVHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 121

Query: 124 YAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 183
           YAMTSSQLSEVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 122 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 181

Query: 184 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFENQPG 243
           RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR+AFENQPG
Sbjct: 182 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 241

Query: 244 ILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPTSPA 303
           ILSAKVIYDRASGKSRGFGFVSFETAEDAE ALESMNGVEVEGRPLRLNIAA RAPTSPA
Sbjct: 242 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 301

Query: 304 AFPRTENTIDSKELLTSISA 324
           AFPRTENTIDSKELLTSISA
Sbjct: 302 AFPRTENTIDSKELLTSISA 321

[Close]

BLAST of Bhi11G001974 vs. NCBI nr
Match: KAA0043803.1 (33 kDa ribonucleoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 562.0 bits (1447), Expect = 3.3e-156
Identity = 293/320 (91.56%), Postives = 304/320 (95.00%), Query Frame = 0


Query: 4   SSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYPLSF 63
           S+ S+AAAAA + +SSSPL KK FFTQHPNQIPSHFSPK N LKLLNLTIHLPNFYPLSF
Sbjct: 49  SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 108

Query: 64  SSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIGNLP 123
           SS SH+H  PPAFD LE+SDPETEY ++QESD EE+TQEEDEQK+SVSREAGKLYIGNLP
Sbjct: 109 SSVSHVHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 168

Query: 124 YAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 183
           YAMTSSQLSEVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 169 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 228

Query: 184 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFENQPG 243
           RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR+AFENQPG
Sbjct: 229 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 288

Query: 244 ILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPTSPA 303
           ILSAKVIYDRASGKSRGFGFVSFETAEDAE ALESMNGVEVEGRPLRLNIAA RAPTSPA
Sbjct: 289 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 348

Query: 304 AFPRTENTIDSKELLTSISA 324
           AFPRTENTIDSKELLTSISA
Sbjct: 349 AFPRTENTIDSKELLTSISA 368

[Close]

BLAST of Bhi11G001974 vs. NCBI nr
Match: XP_004136521.3 (33 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KAE8651116.1 hypothetical protein Csa_001333 [Cucumis sativus])

HSP 1 Score: 560.1 bits (1442), Expect = 1.3e-155
Identity = 294/323 (91.02%), Postives = 302/323 (93.50%), Query Frame = 0


Query: 1   MSASSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYP 60
           MSA S+SMAAAAA +  SSSPL  K FFTQHPNQIPSHFSPK N LKLLNLT H PNFYP
Sbjct: 1   MSAYSLSMAAAAAAASVSSSPLYNKHFFTQHPNQIPSHFSPKHNQLKLLNLTFHSPNFYP 60

Query: 61  LSFSSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIG 120
           LSFSS SHLH  PPAFD LE+SDPETEY  IQESD EEETQEEDEQKVSVSREAGKLYIG
Sbjct: 61  LSFSSVSHLHCAPPAFDELEISDPETEYGHIQESDGEEETQEEDEQKVSVSREAGKLYIG 120

Query: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
           NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ
Sbjct: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180

Query: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEN 240
           IGGRTVRVNFPEVPRGGEKEVMGP+IRSSYNKFVDSPHKIYAGNLGWGLTSQSLR+AFEN
Sbjct: 181 IGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 240

Query: 241 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPT 300
           QPGILSAK+IYDRASGKSRGFGFVSFETAEDAE ALESMNGVEVEGRPLRLNIAAG++P 
Sbjct: 241 QPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQSPI 300

Query: 301 SPAAFPRTENTIDSKELLTSISA 324
           SPAAFPRTENTID KELLTSISA
Sbjct: 301 SPAAFPRTENTIDGKELLTSISA 323

[Close]

BLAST of Bhi11G001974 vs. ExPASy TrEMBL
Match: A0A1S3B7N1 (33 kDa ribonucleoprotein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486688 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.2e-156
Identity = 293/320 (91.56%), Postives = 304/320 (95.00%), Query Frame = 0


Query: 4   SSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYPLSF 63
           S+ S+AAAAA + +SSSPL KK FFTQHPNQIPSHFSPK N LKLLNLTIHLPNFYPLSF
Sbjct: 2   SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 61

Query: 64  SSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIGNLP 123
           SS SH+H  PPAFD LE+SDPETEY ++QESD EE+TQEEDEQK+SVSREAGKLYIGNLP
Sbjct: 62  SSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 121

Query: 124 YAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 183
           YAMTSSQLSEVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 122 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 181

Query: 184 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFENQPG 243
           RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR+AFENQPG
Sbjct: 182 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 241

Query: 244 ILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPTSPA 303
           ILSAKVIYDRASGKSRGFGFVSFETAEDAE ALESMNGVEVEGRPLRLNIAA RAPTSPA
Sbjct: 242 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 301

Query: 304 AFPRTENTIDSKELLTSISA 324
           AFPRTENTIDSKELLTSISA
Sbjct: 302 AFPRTENTIDSKELLTSISA 321

[Close]

BLAST of Bhi11G001974 vs. ExPASy TrEMBL
Match: A0A5D3DPZ1 (33 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004690 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.6e-156
Identity = 293/320 (91.56%), Postives = 304/320 (95.00%), Query Frame = 0


Query: 4   SSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYPLSF 63
           S+ S+AAAAA + +SSSPL KK FFTQHPNQIPSHFSPK N LKLLNLTIHLPNFYPLSF
Sbjct: 2   SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 61

Query: 64  SSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIGNLP 123
           SS SH+H  PPAFD LE+SDPETEY ++QESD EE+TQEEDEQK+SVSREAGKLYIGNLP
Sbjct: 62  SSVSHVHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 121

Query: 124 YAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 183
           YAMTSSQLSEVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 122 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 181

Query: 184 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFENQPG 243
           RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR+AFENQPG
Sbjct: 182 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 241

Query: 244 ILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPTSPA 303
           ILSAKVIYDRASGKSRGFGFVSFETAEDAE ALESMNGVEVEGRPLRLNIAA RAPTSPA
Sbjct: 242 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 301

Query: 304 AFPRTENTIDSKELLTSISA 324
           AFPRTENTIDSKELLTSISA
Sbjct: 302 AFPRTENTIDSKELLTSISA 321

[Close]

BLAST of Bhi11G001974 vs. ExPASy TrEMBL
Match: A0A5A7TK11 (33 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001350 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.6e-156
Identity = 293/320 (91.56%), Postives = 304/320 (95.00%), Query Frame = 0


Query: 4   SSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYPLSF 63
           S+ S+AAAAA + +SSSPL KK FFTQHPNQIPSHFSPK N LKLLNLTIHLPNFYPLSF
Sbjct: 49  SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 108

Query: 64  SSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIGNLP 123
           SS SH+H  PPAFD LE+SDPETEY ++QESD EE+TQEEDEQK+SVSREAGKLYIGNLP
Sbjct: 109 SSVSHVHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 168

Query: 124 YAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 183
           YAMTSSQLSEVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 169 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 228

Query: 184 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFENQPG 243
           RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR+AFENQPG
Sbjct: 229 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 288

Query: 244 ILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPTSPA 303
           ILSAKVIYDRASGKSRGFGFVSFETAEDAE ALESMNGVEVEGRPLRLNIAA RAPTSPA
Sbjct: 289 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 348

Query: 304 AFPRTENTIDSKELLTSISA 324
           AFPRTENTIDSKELLTSISA
Sbjct: 349 AFPRTENTIDSKELLTSISA 368

[Close]

BLAST of Bhi11G001974 vs. ExPASy TrEMBL
Match: A0A0A0LBL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782700 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.6e-156
Identity = 294/323 (91.02%), Postives = 302/323 (93.50%), Query Frame = 0


Query: 1   MSASSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYP 60
           MSA S+SMAAAAA +  SSSPL  K FFTQHPNQIPSHFSPK N LKLLNLT H PNFYP
Sbjct: 1   MSAYSLSMAAAAAAAAVSSSPLYNKHFFTQHPNQIPSHFSPKHNQLKLLNLTFHSPNFYP 60

Query: 61  LSFSSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIG 120
           LSFSS SHLH  PPAFD LE+SDPETEY  IQESD EEETQEEDEQKVSVSREAGKLYIG
Sbjct: 61  LSFSSVSHLHCAPPAFDELEISDPETEYGHIQESDGEEETQEEDEQKVSVSREAGKLYIG 120

Query: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
           NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ
Sbjct: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180

Query: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEN 240
           IGGRTVRVNFPEVPRGGEKEVMGP+IRSSYNKFVDSPHKIYAGNLGWGLTSQSLR+AFEN
Sbjct: 181 IGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 240

Query: 241 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPT 300
           QPGILSAK+IYDRASGKSRGFGFVSFETAEDAE ALESMNGVEVEGRPLRLNIAAG++P 
Sbjct: 241 QPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQSPI 300

Query: 301 SPAAFPRTENTIDSKELLTSISA 324
           SPAAFPRTENTID KELLTSISA
Sbjct: 301 SPAAFPRTENTIDGKELLTSISA 323

[Close]

BLAST of Bhi11G001974 vs. ExPASy TrEMBL
Match: A0A6J1J651 (33 kDa ribonucleoprotein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481694 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.4e-146
Identity = 282/328 (85.98%), Postives = 298/328 (90.85%), Query Frame = 0


Query: 1   MSASSVSMAAAAA-----PSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHL 60
           MSASS++MAAAAA      S SSSSP  K  FFTQ PN+IPSHFSPK  PLKLL L IHL
Sbjct: 1   MSASSLTMAAAAASVSSSSSSSSSSPCKKLFFFTQLPNRIPSHFSPKPKPLKLLELRIHL 60

Query: 61  PNFYPLSFSSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAG 120
           PNFYPL+FSS SHL+  PPAF+GLEVSDP +E AE +ESD +EE++EEDEQKVS SR+AG
Sbjct: 61  PNFYPLAFSSASHLYCAPPAFEGLEVSDPISENAETEESDGKEESREEDEQKVSASRDAG 120

Query: 121 KLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 180
           KLYIGNLPYAMTSSQL+EVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM
Sbjct: 121 KLYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 180

Query: 181 FDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR 240
           FDGS IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR
Sbjct: 181 FDGSLIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR 240

Query: 241 EAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAA 300
           EAFENQPGILSAKVIYDR SG+SRGFGFVSFETAEDAE AL+SMNGVEVEGRPLRLN+AA
Sbjct: 241 EAFENQPGILSAKVIYDRESGRSRGFGFVSFETAEDAESALDSMNGVEVEGRPLRLNMAA 300

Query: 301 GRAPTSPAAFPRTENTIDSKELLTSISA 324
            RAPTSPAAF RTENTIDS ELLTSISA
Sbjct: 301 DRAPTSPAAFTRTENTIDSNELLTSISA 328

The following BLAST results are available for this feature:

BLAST of Bhi11G001974 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52380.1	6.0e-79	50.74	chloroplast RNA-binding protein 33	[more]
AT2G37220.1	5.7e-37	33.57	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G60000.1	7.7e-34	35.96	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52150.1	2.5e-32	37.69	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52150.2	2.5e-32	37.69	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of Bhi11G001974 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19684	1.5e-82	52.98	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=...	[more]
Q39061	8.5e-78	50.74	RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 ...	[more]
Q08935	2.3e-38	36.74	29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 S...	[more]
Q08937	3.8e-38	36.01	29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 S...	[more]
P49313	1.1e-37	36.67	30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 PE=...	[more]

BLAST of Bhi11G001974 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904039.1	2.0e-172	100.00	33 kDa ribonucleoprotein, chloroplastic [Benincasa hispida]	[more]
XP_008442930.1	2.6e-156	91.56	PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Cucumis melo]	[more]
TYK25330.1	3.3e-156	91.56	33 kDa ribonucleoprotein [Cucumis melo var. makuwa]	[more]
KAA0043803.1	3.3e-156	91.56	33 kDa ribonucleoprotein [Cucumis melo var. makuwa]	[more]
XP_004136521.3	1.3e-155	91.02	33 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KAE8651116.1 hypothet...	[more]

BLAST of Bhi11G001974 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7N1	1.2e-156	91.56	33 kDa ribonucleoprotein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486688 ...	[more]
A0A5D3DPZ1	1.6e-156	91.56	33 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7TK11	1.6e-156	91.56	33 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0LBL6	3.6e-156	91.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782700 PE=4 SV=1	[more]
A0A6J1J651	3.4e-146	85.98	33 kDa ribonucleoprotein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 116..189 e-value: 7.7E-28 score: 108.5 coord: 219..292 e-value: 2.2E-25 score: 100.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 220..290 e-value: 1.4E-18 score: 66.5 coord: 117..187 e-value: 1.2E-20 score: 73.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 218..296 score: 18.649113
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 115..193 score: 19.399549
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 200..304 e-value: 1.4E-24 score: 88.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 77..199 e-value: 8.2E-30 score: 105.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR48025:SF11	RNA-BINDING PROTEIN CP33, CHLOROPLASTIC	coord: 1..306
None	No IPR available	PANTHER	PTHR48025	OS02G0815200 PROTEIN	coord: 1..306
None	No IPR available	CDD	cd12399	RRM_HP0827_like	coord: 116..192 e-value: 6.44472E-34 score: 117.329
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 213..302
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 112..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M001974	Bhi11M001974	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901259	chloroplast rRNA processing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding