Bhi11G001868 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G001868
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	H/ACA ribonucleoprotein complex subunit 4-like
Location	chr11: 61416481 .. 61418477 (-)
RNA-Seq Expression	Bhi11G001868
Synteny	Bhi11G001868

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACAAATAGAGCGAAAATACTCCCATTTTCTTTCCGAATGCTTAAAATGTCACTTGTTTCTACCTTCTCATGGTTCCTTTCTTCTATCGACTTTCCGATCAACAATGGCTTCATCATCTTCTGGTATGTACCTGTTTTTGAAAACTCGTTTTCTGTTATCGATGTTTCATCCTTTTGTTCTGTTCACGATGTTATCTTTAGCAAATGCCATGTAATTGATCCTTGATCGATAAGTTGGATAGTTACTATCATCAACATCAGTTCAATAATCTAGGTTACTTAATCTATTTGATTACTTTATTTCGGTAATTTGAATACCAAAGGTATCCTATTCATTTTTTGATGTATTTCATATTTTAAAAGCCGGTGGTATAGATGATGAGATTTTTTAACTGGCAAATGTTTGATTATCAAGAAGTTGGAGGCTGAAAGAGCATGAATGGCGATATAGAACATCTATGAGTGCAAGCAAATCGATTTTGTTTTTGTTTGTATAATTCATGATGAGAAAAAATCAAGTTCACTTACTAGTTTTGCTTATTTCCGAATGTGGGCTTTGTTAATCTTGTTGGTTTTTCGTATATTTATATGTCAAGCTTCAAGTTTTTCAATATTTTATTTGTTTCACCAAACAATTTTCAACTTTCCATTACCGATCAAAGATTCAATGAAAGTCTTGAAGAATTGCAAGTTTTTGTTCAACTATATATTTTGCCTCTATGTTAAATGCTAAATTTAATAATGTCAGCAAACTCAACACACCTGATTTAATTAGAATTTTAAGGATTAAATTTTACTTTTTTTTTATTATTATTATTTTGGCGAAGATAATGAATTGCAATATTTAGGCACACACAATTCAAGGAAGAAGCTCCATGAATACTCACAATAAAATCTCCATTGTGCCAAATAGATCGTGTTTGTGCCAAATATGATGAAGAACTACACACCAAAGGATTTACTAAAGTGACAAATTCAATTGAGTTCTATATCCTACTGAATAATCCTATGAGAACACACATCCTACAAGAGTATGTTCCCCTAGACAACCTAACTAAAAAGCTACCGATGCCCACTCTCCTAGCAAGAGTATGTCCCCCAGACAATCTGACGCCAAAGTTAGTTTAAATTACCATAAGATGCCTAGAAGCGCAATGACTCATATACACTAACGACTAAAAATACCCCGAACAAAAAGGAAGTTAGGTCACTCAAAAATCAAAAGGGTTATAATGGATCAAGATACTTACCCAAAGAAATGGGGATTAGGTCCAAGGGCATCGATGAAGAAGAAACTTATTGGAGAAGGGAAGTTGGACAAACATGGAAAACCAAATGAGAACACTCCTTATGAGTGGCTAAGGAATTTGGTTTTACCCATTGGTGTTTTTGCTACTAACTCCGCTACTGCTAAGCCAACTACTGCAGAAGAGAAAGGAAAAGATGCCGGAAGGTGGAAGTAAAAACATGATGAAGATACCAAAGCTGCTCTAGCTAAGAAACTGAAGGTTGAGAAAACTGGAGAAGTTGAATAAGTTGAAGGAGTTGGGAATAAAGAAAAGAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAAGAAAAAGAGAAGGGTATTGTAGAAGAACCGTCGGATGAGAAGAATGCTGAGAAGTCAAAGAAGAAAAATAAGAACACATATAAGCTAAATAAGTGTTGTAGGAGTCCAATCCACTTGTTGCACAACCAAGATTTTATTTTAAACTTGTGTTTTGTGAACCCAATTGGGACTAATTTTTTAGATTGACCCATCTTGAAAGCACTAGGTTTTCTTTTATGTGATATGAGGATGACCTAAGGGGAGAAGAGTGAAAAGAGGCAGAAAATCGAAAAAAAAACAACAGTTTGATTTTTCAGCGATAGCCTCCACAAAATTATTGTTTGCCAAAGTTTGAAACGTTGGATCATACTAAAATTTAGTTAGTATGTTCGGGACACATAGGATCTTGTTATAAACGATTGG

mRNA sequence

GACAAATAGAGCGAAAATACTCCCATTTTCTTTCCGAATGCTTAAAATGTCACTTGTTTCTACCTTCTCATGGTTCCTTTCTTCTATCGACTTTCCGATCAACAATGGCTTCATCATCTTCTGGCACACACAATTCAAGGAAGAAGCTCCATGAATACTCACAATAAAATCTCCATTGTGCCAAATAGATCGTGTTTGTGCCAAATATGATGAAGAACTACACACCAAAGGATTTACTAAAGTGACAAATTCAATTGAGTTCTATATCCTACTGAATAATCCTATGAGAACACACATCCTACAAGAGTATGTTCCCCTAGACAACCTAACTAAAAAGCTACCGATGCCCACTCTCCTAGCAAGAGTATGTCCCCCAGACAATCTGACGCCAAAGTTAGTTTAAATTACCATAAGATGCCTAGAAGCGCAATGACTCATATACACTAACGACTAAAAATACCCCGAACAAAAAGGAAGTTAGGTCACTCAAAAATCAAAAGGGTTATAATGGATCAAGATACTTACCCAAAGAAATGGGGATTAGGTCCAAGGGCATCGATGAAGAAGAAACTTATTGGAGAAGGGAAGTTGGACAAACATGGAAAACCAAATGAGAACACTCCTTATGAGTGGCTAAGGAATTTGGTTTTACCCATTGGTGTTTTTGCTACTAACTCCGCTACTGCTAAGCCAACTACTGCAGAAGAGAAAGGAAAAGATGCCGGAAGGTGGAAGTAAAAACATGATGAAGATACCAAAGCTGCTCTAGCTAAGAAACTGAAGGTTGAGAAAACTGGAGAAGTTGAATAAGTTGAAGGAGTTGGGAATAAAGAAAAGAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAAGAAAAAGAGAAGGGTATTGTAGAAGAACCGTCGGATGAGAAGAATGCTGAGAAGTCAAAGAAGAAAAATAAGAACACATATAAGCTAAATAAGTGTTGTAGGAGTCCAATCCACTTGTTGCACAACCAAGATTTTATTTTAAACTTGTGTTTTGTGAACCCAATTGGGACTAATTTTTTAGATTGACCCATCTTGAAAGCACTAGGTTTTCTTTTATGTGATATGAGGATGACCTAAGGGGAGAAGAGTGAAAAGAGGCAGAAAATCGAAAAAAAAACAACAGTTTGATTTTTCAGCGATAGCCTCCACAAAATTATTGTTTGCCAAAGTTTGAAACGTTGGATCATACTAAAATTTAGTTAGTATGTTCGGGACACATAGGATCTTGTTATAAACGATTGG

Coding sequence (CDS)

ATGGATCAAGATACTTACCCAAAGAAATGGGGATTAGGTCCAAGGGCATCGATGAAGAAGAAACTTATTGGAGAAGGGAAGTTGGACAAACATGGAAAACCAAATGAGAACACTCCTTATGAGTGGCTAAGGAATTTGGTTTTACCCATTGGTGTTTTTGCTACTAACTCCGCTACTGCTAAGCCAACTACTGCAGAAGAGAAAGGAAAAGATGCCGGAAGGTGGAAGTAA

Protein sequence

MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIGVFATNSATAKPTTAEEKGKDAGRWK

Homology

[Close]

BLAST of Bhi11G001868 vs. TAIR 10
Match: AT3G57150.1 (homologue of NAP57 )

HSP 1 Score: 100.5 bits (249), Expect = 6.0e-22
Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG---VFATNS 60
           MD+DTYP+KWGLGPRASMKKKLI +GKLDKHGKPNE TP EW RN+VLP G   + A  +
Sbjct: 362 MDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPVEWSRNVVLPTGGDAIIAGAA 421

Query: 61  ATAKPTTAEEKGKDAG 74
           A  +   A+ +  +AG
Sbjct: 422 AAPEEIKADAENGEAG 437

[Close]

BLAST of Bhi11G001868 vs. ExPASy Swiss-Prot
Match: Q9LD90 (H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=CBF5 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.5e-21
Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG---VFATNS 60
           MD+DTYP+KWGLGPRASMKKKLI +GKLDKHGKPNE TP EW RN+VLP G   + A  +
Sbjct: 362 MDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPVEWSRNVVLPTGGDAIIAGAA 421

Query: 61  ATAKPTTAEEKGKDAG 74
           A  +   A+ +  +AG
Sbjct: 422 AAPEEIKADAENGEAG 437

[Close]

BLAST of Bhi11G001868 vs. ExPASy Swiss-Prot
Match: O44081 (H/ACA ribonucleoprotein complex subunit 4 OS=Drosophila melanogaster OX=7227 GN=Nop60B PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.9e-14
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLV 48
           M++DTYP+KWGLGP+AS KK LI  GKLDK G+PNENTP EWL   V
Sbjct: 369 MERDTYPRKWGLGPKASAKKALIAAGKLDKFGRPNENTPKEWLTGYV 415

[Close]

BLAST of Bhi11G001868 vs. ExPASy Swiss-Prot
Match: Q54T81 (Probable H/ACA ribonucleoprotein complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=nola4 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.8e-13
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIGVFATNSATA 60
           MD+D YP +WGLGP+A +KK++I +GKLDK GKPNE TP +W        G  AT + T+
Sbjct: 355 MDRDVYPVRWGLGPKAKVKKEMIKDGKLDKFGKPNEKTPSDWTNTYTYYTGQVATTTTTS 414

[Close]

BLAST of Bhi11G001868 vs. ExPASy Swiss-Prot
Match: P40615 (H/ACA ribonucleoprotein complex subunit DKC1 OS=Rattus norvegicus OX=10116 GN=Dkc1 PE=1 SV=4)

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLV 48
           M++DTYP+KWGLGP+AS KK+LI +G LDKHG+P + TP  W R+ V
Sbjct: 372 MERDTYPRKWGLGPKASQKKQLIKQGLLDKHGRPTDGTPASWTRDYV 418

[Close]

BLAST of Bhi11G001868 vs. ExPASy Swiss-Prot
Match: Q5ZJH9 (H/ACA ribonucleoprotein complex subunit DKC1 OS=Gallus gallus OX=9031 GN=DKC1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLV 48
           M++DTYP+KWGLGP+AS KK +I +G LDKHGKPNE TP  W +  V
Sbjct: 369 MERDTYPRKWGLGPKASQKKMMIQKGLLDKHGKPNECTPDSWKKEYV 415

[Close]

BLAST of Bhi11G001868 vs. NCBI nr
Match: XP_038894523.1 (H/ACA ribonucleoprotein complex subunit 4-like [Benincasa hispida])

HSP 1 Score: 131.3 bits (329), Expect = 3.4e-27
Identity = 63/80 (78.75%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG-------VF 60
           MD+DTYP+KWGLGPRASMKKKLIGEGKLDKHGKPNE TP EWLRNLVLP G       VF
Sbjct: 353 MDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVF 412

Query: 61  ATNSATAKPTTAEEKGKDAG 74
           AT++ATAKPT AEE GKD G
Sbjct: 413 ATDTATAKPTAAEETGKDGG 432

[Close]

BLAST of Bhi11G001868 vs. NCBI nr
Match: XP_008449192.1 (PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 4 [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 7.6e-27
Identity = 63/80 (78.75%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG-------VF 60
           MD+DTYP+KWGLGPRASMK KLIGEGKLDKHGKPNENTP EWLRNLVLP G        F
Sbjct: 359 MDRDTYPRKWGLGPRASMKXKLIGEGKLDKHGKPNENTPQEWLRNLVLPTGGDFLVASAF 418

Query: 61  ATNSATAKPTTAEEKGKDAG 74
           AT SATAKPT AEE GKD G
Sbjct: 419 ATESATAKPTAAEESGKDDG 438

[Close]

BLAST of Bhi11G001868 vs. NCBI nr
Match: XP_011650148.1 (H/ACA ribonucleoprotein complex subunit 4 [Cucumis sativus] >KAE8652522.1 hypothetical protein Csa_013456 [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 1.7e-26
Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG-------VF 60
           MD+DTYP+KWGLGPRASMKKKLIGEGKLDKHGKPNENTP EW+RNLVLP G        F
Sbjct: 359 MDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEWMRNLVLPTGGDVLVASAF 418

Query: 61  ATNSATAKPTTAEEKGKDAG 74
            ++SATAKPT AEE GKD G
Sbjct: 419 VSDSATAKPTAAEESGKDDG 438

[Close]

BLAST of Bhi11G001868 vs. NCBI nr
Match: XP_023539854.1 (H/ACA ribonucleoprotein complex subunit 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117.9 bits (294), Expect = 3.9e-23
Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG-------VF 60
           MD+DTYP+KWGLGPRASMKKKLIGEGKLDKHGKPNENTP EWLRNLVLP G       VF
Sbjct: 375 MDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEWLRNLVLPTGGDSLVASVF 434

Query: 61  ATNSATAKPTTAEEKGKD 72
           A+++AT K + A ++ KD
Sbjct: 435 ASDTATPKQSVAADEEKD 452

[Close]

BLAST of Bhi11G001868 vs. NCBI nr
Match: XP_022941699.1 (H/ACA ribonucleoprotein complex subunit 4-like [Cucurbita moschata] >KAG6596411.1 H/ACA ribonucleoprotein complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.9 bits (294), Expect = 3.9e-23
Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG-------VF 60
           MD+DTYP+KWGLGPRASMKKKLIGEGKLDKHGKPNENTP EWLRNLVLP G       VF
Sbjct: 375 MDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEWLRNLVLPTGGDSLVASVF 434

Query: 61  ATNSATAKPTTAEEKGKD 72
           A+++AT K + A ++ KD
Sbjct: 435 ASDTATPKQSVAADEEKD 452

[Close]

BLAST of Bhi11G001868 vs. ExPASy TrEMBL
Match: A0A1S3BLH6 (LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103491111 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.7e-27
Identity = 63/80 (78.75%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG-------VF 60
           MD+DTYP+KWGLGPRASMK KLIGEGKLDKHGKPNENTP EWLRNLVLP G        F
Sbjct: 359 MDRDTYPRKWGLGPRASMKXKLIGEGKLDKHGKPNENTPQEWLRNLVLPTGGDFLVASAF 418

Query: 61  ATNSATAKPTTAEEKGKDAG 74
           AT SATAKPT AEE GKD G
Sbjct: 419 ATESATAKPTAAEESGKDDG 438

[Close]

BLAST of Bhi11G001868 vs. ExPASy TrEMBL
Match: A0A0A0LQ86 (PUA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039120 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.2e-27
Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG-------VF 60
           MD+DTYP+KWGLGPRASMKKKLIGEGKLDKHGKPNENTP EW+RNLVLP G        F
Sbjct: 359 MDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEWMRNLVLPTGGDVLVASAF 418

Query: 61  ATNSATAKPTTAEEKGKDAG 74
            ++SATAKPT AEE GKD G
Sbjct: 419 VSDSATAKPTAAEESGKDDG 438

[Close]

BLAST of Bhi11G001868 vs. ExPASy TrEMBL
Match: A0A6J1FP65 (H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita moschata OX=3662 GN=LOC111446978 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-23
Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG-------VF 60
           MD+DTYP+KWGLGPRASMKKKLIGEGKLDKHGKPNENTP EWLRNLVLP G       VF
Sbjct: 375 MDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEWLRNLVLPTGGDSLVASVF 434

Query: 61  ATNSATAKPTTAEEKGKD 72
           A+++AT K + A ++ KD
Sbjct: 435 ASDTATPKQSVAADEEKD 452

[Close]

BLAST of Bhi11G001868 vs. ExPASy TrEMBL
Match: A0A6J1I1U9 (H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita maxima OX=3661 GN=LOC111470135 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.5e-23
Identity = 56/78 (71.79%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG-------VF 60
           MD+DTYP+KWGLGPRASMKKKLIGEGKLDKHGKPNENTP EWLRNLVLP G       VF
Sbjct: 375 MDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEWLRNLVLPTGGDSLVASVF 434

Query: 61  ATNSATAKPTTAEEKGKD 72
           A+++AT K   A ++ KD
Sbjct: 435 ASDTATPKQNVAADEEKD 452

[Close]

BLAST of Bhi11G001868 vs. ExPASy TrEMBL
Match: A0A6J1J6M3 (H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita maxima OX=3661 GN=LOC111481852 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21
Identity = 55/81 (67.90%), Postives = 60/81 (74.07%), Query Frame = 0


Query: 1   MDQDTYPKKWGLGPRASMKKKLIGEGKLDKHGKPNENTPYEWLRNLVLPIG-------VF 60
           MD+DTYP+KWGLGPRASMKKKLIGEGKLDKHGKPNE TP EW+RNLVLP G       VF
Sbjct: 375 MDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNEKTPSEWMRNLVLPTGGDSLVASVF 434

Query: 61  ATNSATAKPTTAEEKGKDAGR 75
           AT+SAT      E +    GR
Sbjct: 435 ATDSATVDEGKQETEKDGGGR 455

The following BLAST results are available for this feature:

BLAST of Bhi11G001868 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57150.1	6.0e-22	61.84	homologue of NAP57	[more]

BLAST of Bhi11G001868 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LD90	8.5e-21	61.84	H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=CBF...	[more]
O44081	5.9e-14	70.21	H/ACA ribonucleoprotein complex subunit 4 OS=Drosophila melanogaster OX=7227 GN=...	[more]
Q54T81	3.8e-13	51.67	Probable H/ACA ribonucleoprotein complex subunit 4 OS=Dictyostelium discoideum O...	[more]
P40615	1.5e-12	61.70	H/ACA ribonucleoprotein complex subunit DKC1 OS=Rattus norvegicus OX=10116 GN=Dk...	[more]
Q5ZJH9	2.5e-12	63.83	H/ACA ribonucleoprotein complex subunit DKC1 OS=Gallus gallus OX=9031 GN=DKC1 PE...	[more]

BLAST of Bhi11G001868 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894523.1	3.4e-27	78.75	H/ACA ribonucleoprotein complex subunit 4-like [Benincasa hispida]	[more]
XP_008449192.1	7.6e-27	78.75	PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 4 [Cucum...	[more]
XP_011650148.1	1.7e-26	76.25	H/ACA ribonucleoprotein complex subunit 4 [Cucumis sativus] >KAE8652522.1 hypoth...	[more]
XP_023539854.1	3.9e-23	71.79	H/ACA ribonucleoprotein complex subunit 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022941699.1	3.9e-23	71.79	H/ACA ribonucleoprotein complex subunit 4-like [Cucurbita moschata] >KAG6596411....	[more]

BLAST of Bhi11G001868 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BLH6	3.7e-27	78.75	LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 4 OS=Cucumis melo O...	[more]
A0A0A0LQ86	8.2e-27	76.25	PUA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039120 PE=3 SV...	[more]
A0A6J1FP65	1.9e-23	71.79	H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1I1U9	2.5e-23	71.79	H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1J6M3	1.4e-21	67.90	H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036974	PUA domain superfamily	GENE3D	2.30.130.10	PUA domain	coord: 1..46 e-value: 3.2E-14 score: 54.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..76
None	No IPR available	PANTHER	PTHR23127:SF2	BNAA02G21770D PROTEIN	coord: 1..62
IPR004802	tRNA pseudouridine synthase B family	PANTHER	PTHR23127	CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5	coord: 1..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M001868	Bhi11M001868	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0006396	RNA processing
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding