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Bhi11G001119 (gene) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCGGCACAGAGATTATTGGCAATAAAATTCATAGCAGCCAAAAAGAGGTGGAGAGAAAAATAGCAAAACTTAAATCAAAGTGAAGACATTTCCAAAAATAAATTGGGGCCTTATATTTTGTGTAGATAAGGTTCCAATTCCAACTACCTGTTTTTTTCTGCACGTATTATCATCTCTCACAAAGAGTGTAGAGACAGAGAAATGGCAGAAACTGGGCACCTTGTAACAGCTAGAAATATCAACTCCATTTCAAGTTCATTCAACAAAGCTGCTGCACCTAAATATGCAACTCAAACATTCAAAATCACAGCTTCTTCAAAGAGAAATGACATCTCCTTGGTAAACACATTCTTCTCCTCTTCATCTTTCAGATTTCTGCAGATTTCCATTTTCAAAAACTCTTCCTCTTCTATCTAATCAGTTCATCTTTTAACAATTGCCTATTAATTGATGGAATGAAAAACTTGGATTGTTCAATCTAGTTTCTGGCTTCTACTTGTTTGCTCTATTGTTGAGAGTCTCTAGAATGTATAGTTCTTCATACAATTCCCTTCCAACTCAAGCAAGACTTTTTGTTTTAATGAAGAGAAGAAGCAACAAAACGTCAAGGCGTCTAATCACAATATCAACATCAGGAAGCAGATGGCAGGGGAAATGGACCAGTGATTACCTGCTTTCCCTGCGAGATCTCAACTTAGAAGACTTGGTAGAAGATGAACACAAAAATGCACGCGTCTTCATCAACCTATGTATTGAGAAGGTAATTTCAATACTTTTTTCCTCCAAAAATCTATTTTATGTATAATGATATTTAATGAACACAACTTGAATCTAACTCCAACAACATCTAACAATGGATCCATATCCAATAACATCTCAGAATGAATCATTATTGGAGAGGCCGAGACGGGTAGAGACTTTTTTAAAGAATGAGACTTGTTTAGAGAGATGAGTGTGTTGGGGGGAGAAAAAAGGACTTTTCTTTAAAAGGGAGTAGTAAAGAAAATCATTTTTCTTCTTCTTTTTCTTTCCTTGTGAAGGAGCATGCTGAAGAATCCATTTCTCAACTCAACGAGAATAGATATTAAACAGGCATTTTTGAAGCAATTTAAAGAAGCCAAACAGCCCCAAATCAGACCAATTCTACACAAAATGCTCTGTCAGATTACTAGAATACTGATTTTCCCTTTGTTTACCAGCATGCAAGTTTCGGGTTCACCGTGGATGGGAAGATCAACACATCATTCACTCGAAAGTGCTGTACCTGTTCTTCACCATACTGCAGAGAGGTAGCACTGTTTAAATAACCAAACAAACTTTATTAGATTTACTTGCGCAATTGCAGAATTTCAGGGCAATTACTAGAAACTTCCACAATTTTCTGTTATCTTTATCTCATCTATCCACGAGGTTTCAATTCAGAAACATTCCAACCGAAGTTCTAACACATACAATTATCTTAATCAAACAGATCAATGCAAACTTTAATGTATTGGTTCTGTCATCAAACAGAACCAACAGGGAGATTCATCTTCCAGATATTGGAGGTGACGATCCATCAGTAAGTTTCTCAAGTTTTTGCATTTCTTCACTTCAATCACTAAGAACTATGACACCTTCTTAAACTTAACAGGTGATCTACGTTAAACCTGGACTTGAAGCTGATCTAGATTCATTCGTACGTGACACAATTAGGCTTACAACCTCAACCAAGGTGAGAAGTTGAATGCAAATAGAATTGGCCTACTTAACAATAACCATGATATCTAAATACTACCAAGTTTCAATTGGAAGAAGTTAACCAAACAGCATACTCTTCCAGGACACTTGCTCAGAGTTGTGTGAGAAATCTCAACCCACAGTACAATGTAAGTGGTCAAGTGTCACTCAAGCTTCCCTTGCAATCAACGTTGGAACTAATTGAGCAATGTTCATTGCAGATATTGGGGCACAGAATGGTGCATCTATAGACAAGAGATGGTCCAGGCTTTTGGAGCTTAGAAAATCAAATGCATAGATAACAAGCAATATATACATATATATATGTATATATATTAATGATTGTTCAGGTTTCAAAAAAACTATAATATTGATGATTGTTCAAACTAGGCCTTAAAAACATGTCTGCCCATTGGTAAAACTCAATTGTTTATCATGTTTTTAAGTATATATCATGATGGAAAAGTGGTTGGCATCTTACGCAGTGGAACTAAAACTAGTTTTGCCTCCTCAATTATATTTCTCCTTCAAGTAGTAGAAGACCAATGAGTTAGTACGGATTGTAGGTATACAATTGTCCATTTGACCAGACCATTCATCAGATGGTCAAAATACACAGTATAGCTAAATCGACCAGGGAAATTCCCAATATAGGTCAAAAGTAATGAAAGAACATCATATATCAGCAGCAAGGAAATTCCCAGGTAGTGACACC GTCGGCACAGAGATTATTGGCAATAAAATTCATAGCAGCCAAAAAGAGGTGGAGAGAAAAATAGCAAAACTTAAATCAAAGTGAAGACATTTCCAAAAATAAATTGGGGCCTTATATTTTGTGTAGATAAGGTTCCAATTCCAACTACCTGTTTTTTTCTGCACGTATTATCATCTCTCACAAAGAGTGTAGAGACAGAGAAATGGCAGAAACTGGGCACCTTGTAACAGCTAGAAATATCAACTCCATTTCAAGTTCATTCAACAAAGCTGCTGCACCTAAATATGCAACTCAAACATTCAAAATCACAGCTTCTTCAAAGAGAAATGACATCTCCTTGAGAAGAAGCAACAAAACGTCAAGGCGTCTAATCACAATATCAACATCAGGAAGCAGATGGCAGGGGAAATGGACCAGTGATTACCTGCTTTCCCTGCGAGATCTCAACTTAGAAGACTTGGTAGAAGATGAACACAAAAATGCACGCGTCTTCATCAACCTATGTATTGAGAAGCATGCAAGTTTCGGGTTCACCGTGGATGGGAAGATCAACACATCATTCACTCGAAAGTGCTGTACCTGTTCTTCACCATACTGCAGAGAGATCAATGCAAACTTTAATGTATTGGTTCTGTCATCAAACAGAACCAACAGGGAGATTCATCTTCCAGATATTGGAGGTGACGATCCATCAGTGATCTACGTTAAACCTGGACTTGAAGCTGATCTAGATTCATTCGTACGTGACACAATTAGGCTTACAACCTCAACCAAGGACACTTGCTCAGAGTTGTGTGAGAAATCTCAACCCACAGTACAATATATTGGGGCACAGAATGGTGCATCTATAGACAAGAGATGGTCCAGGCTTTTGGAGCTTAGAAAATCAAATGCATAGATAACAAGCAATATATACATATATATATGTATATATATTAATGATTGTTCAGGTTTCAAAAAAACTATAATATTGATGATTGTTCAAACTAGGCCTTAAAAACATGTCTGCCCATTGGTAAAACTCAATTGTTTATCATGTTTTTAAGTATATATCATGATGGAAAAGTGGTTGGCATCTTACGCAGTGGAACTAAAACTAGTTTTGCCTCCTCAATTATATTTCTCCTTCAAGTAGTAGAAGACCAATGAGTTAGTACGGATTGTAGGTATACAATTGTCCATTTGACCAGACCATTCATCAGATGGTCAAAATACACAGTATAGCTAAATCGACCAGGGAAATTCCCAATATAGGTCAAAAGTAATGAAAGAACATCATATATCAGCAGCAAGGAAATTCCCAGGTAGTGACACC ATGGCAGAAACTGGGCACCTTGTAACAGCTAGAAATATCAACTCCATTTCAAGTTCATTCAACAAAGCTGCTGCACCTAAATATGCAACTCAAACATTCAAAATCACAGCTTCTTCAAAGAGAAATGACATCTCCTTGAGAAGAAGCAACAAAACGTCAAGGCGTCTAATCACAATATCAACATCAGGAAGCAGATGGCAGGGGAAATGGACCAGTGATTACCTGCTTTCCCTGCGAGATCTCAACTTAGAAGACTTGGTAGAAGATGAACACAAAAATGCACGCGTCTTCATCAACCTATGTATTGAGAAGCATGCAAGTTTCGGGTTCACCGTGGATGGGAAGATCAACACATCATTCACTCGAAAGTGCTGTACCTGTTCTTCACCATACTGCAGAGAGATCAATGCAAACTTTAATGTATTGGTTCTGTCATCAAACAGAACCAACAGGGAGATTCATCTTCCAGATATTGGAGGTGACGATCCATCAGTGATCTACGTTAAACCTGGACTTGAAGCTGATCTAGATTCATTCGTACGTGACACAATTAGGCTTACAACCTCAACCAAGGACACTTGCTCAGAGTTGTGTGAGAAATCTCAACCCACAGTACAATATATTGGGGCACAGAATGGTGCATCTATAGACAAGAGATGGTCCAGGCTTTTGGAGCTTAGAAAATCAAATGCATAG MAETGHLVTARNINSISSSFNKAAAPKYATQTFKITASSKRNDISLRRSNKTSRRLITISTSGSRWQGKWTSDYLLSLRDLNLEDLVEDEHKNARVFINLCIEKHASFGFTVDGKINTSFTRKCCTCSSPYCREINANFNVLVLSSNRTNREIHLPDIGGDDPSVIYVKPGLEADLDSFVRDTIRLTTSTKDTCSELCEKSQPTVQYIGAQNGASIDKRWSRLLELRKSNA Homology
BLAST of Bhi11G001119 vs. TAIR 10
Match: AT3G19800.1 (Protein of unknown function (DUF177) ) HSP 1 Score: 224.2 bits (570), Expect = 1.1e-58 Identity = 108/180 (60.00%), Postives = 137/180 (76.11%), Query Frame = 0
BLAST of Bhi11G001119 vs. TAIR 10
Match: AT3G19800.2 (Protein of unknown function (DUF177) ) HSP 1 Score: 224.2 bits (570), Expect = 1.1e-58 Identity = 108/180 (60.00%), Postives = 137/180 (76.11%), Query Frame = 0
BLAST of Bhi11G001119 vs. ExPASy Swiss-Prot
Match: Q9C5M1 (Large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g19800 PE=2 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.6e-57 Identity = 108/180 (60.00%), Postives = 137/180 (76.11%), Query Frame = 0
BLAST of Bhi11G001119 vs. NCBI nr
Match: XP_038906104.1 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic [Benincasa hispida]) HSP 1 Score: 460.7 bits (1184), Expect = 7.5e-126 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
BLAST of Bhi11G001119 vs. NCBI nr
Match: XP_011651803.2 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X1 [Cucumis sativus] >KAE8650945.1 hypothetical protein Csa_002331 [Cucumis sativus]) HSP 1 Score: 415.2 bits (1066), Expect = 3.6e-112 Identity = 210/232 (90.52%), Postives = 220/232 (94.83%), Query Frame = 0
BLAST of Bhi11G001119 vs. NCBI nr
Match: XP_031738565.1 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic [Cucumis sativus] >KAE8650911.1 hypothetical protein Csa_001037 [Cucumis sativus]) HSP 1 Score: 414.1 bits (1063), Expect = 8.1e-112 Identity = 213/232 (91.81%), Postives = 220/232 (94.83%), Query Frame = 0
BLAST of Bhi11G001119 vs. NCBI nr
Match: XP_023527889.1 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo] >XP_023527890.1 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 410.2 bits (1053), Expect = 1.2e-110 Identity = 205/231 (88.74%), Postives = 214/231 (92.64%), Query Frame = 0
BLAST of Bhi11G001119 vs. NCBI nr
Match: XP_008461873.1 (PREDICTED: uncharacterized protein LOC103500366 [Cucumis melo] >KAA0052757.1 DUF177 domain-containing protein [Cucumis melo var. makuwa] >TYK04199.1 DUF177 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-110 Identity = 211/232 (90.95%), Postives = 213/232 (91.81%), Query Frame = 0
BLAST of Bhi11G001119 vs. ExPASy TrEMBL
Match: A0A5D3C1F8 (DUF177 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00270 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 7.4e-111 Identity = 211/232 (90.95%), Postives = 213/232 (91.81%), Query Frame = 0
BLAST of Bhi11G001119 vs. ExPASy TrEMBL
Match: A0A1S3CFK7 (uncharacterized protein LOC103500366 OS=Cucumis melo OX=3656 GN=LOC103500366 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 7.4e-111 Identity = 211/232 (90.95%), Postives = 213/232 (91.81%), Query Frame = 0
BLAST of Bhi11G001119 vs. ExPASy TrEMBL
Match: A0A6J1J5E3 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111481900 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 9.6e-111 Identity = 204/231 (88.31%), Postives = 214/231 (92.64%), Query Frame = 0
BLAST of Bhi11G001119 vs. ExPASy TrEMBL
Match: A0A6J1F8T8 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441878 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 3.1e-109 Identity = 202/231 (87.45%), Postives = 212/231 (91.77%), Query Frame = 0
BLAST of Bhi11G001119 vs. ExPASy TrEMBL
Match: A0A0A0L9P4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G656510 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 5.5e-106 Identity = 210/270 (77.78%), Postives = 218/270 (80.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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