Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCACACCCCAACCAAACCAATTCCTTCCTCCCCCTCCCCAAACACCTCTACCTTCATCGAATACCCAAAGAGAACCCAATCCCAAATACCTCCCATGGACTTACTGAAATCAAGTCCTCATCACTCTCATTAATGCCACTCTATCCACTTCCGCTTTCTCCCATGTAACCTCGACATCCACCGATCAAAAACTCTGGCTATCTCTCGAAAAGTATTATTCTTCTAAAACCCGTACGAGTATTTTGGAGCTTTATTTAGAACTCTGCAGTGCAAAAAAATCACGATCGAATCCGTCGAGCAATACACACAGCATGTCAAGGACGTCGTTGATTGGTTAGCTGCAGCTTGGTCACCATCGATGATGAAGAGACTCCTCCACATTCTAAATGGCTTACATTCGATTACAACTCATTCCGCACCTCTCTTCGAACTCGCAATACACCGATTACACTTGAAGAGCTCGATGTGTTACTCACCACTGAGGAGAAACCTATTGCTCGCCTAAATTCGGTCAGCAAACCAACACCGACAGCCATGGTCACCGTCAAGTCTTCTGAAAATCGGCAAGGGCCTCGTGGAAATCAACAAGCACCGCATTCCTCCATTTTTAACCCTAATTTTCTTGCAAGTCAGCAACCTAATTTCGACAACTATAGGTGGCGTGGACGTGGGTCAAACCGATTGAATGGATTTGGGCCTTCTCAAGGCTCATTCAGTCTACCAAGCTTTTCCAATGGCCATAATTCTTCACTTAAGCCTGATTCAAATACTGGGCGAATTCAATGTCAAATCTGCTTAAAAAATGGCCATAGTGCCATTGACTACTACAACTAA
mRNA sequence
ATGGATTCACACCCCAACCAAACCAATTCCTTCCTCCCCCTCCCCAAACACCTCTACCTTCATCGAATACCCAAAGAGAACCCAATCCCAAATACCTCCCATGGACTTACTGAAATCAAGTCCTCATCACTCTCATTAATGCCACTCTATCCACTTCCGCTTTCTCCCATCTTGGTCACCATCGATGATGAAGAGACTCCTCCACATTCTAAATGGCTTACATTCGATTACAACTCATTCCGCACCTCTCTTCGAACTCGCAATACACCGATTACACTTGAAGAGCTCGATGTGTTACTCACCACTGAGGAGAAACCTATTGCTCGCCTAAATTCGGTCAGCAAACCAACACCGACAGCCATGGTCACCGTCAAGTCTTCTGAAAATCGGCAAGGGCCTCGTGGAAATCAACAAGCACCGCATTCCTCCATTTTTAACCCTAATTTTCTTGCAAGTCAGCAACCTAATTTCGACAACTATAGGTGGCGTGGACGTGGGTCAAACCGATTGAATGGATTTGGGCCTTCTCAAGGCTCATTCAGTCTACCAAGCTTTTCCAATGGCCATAATTCTTCACTTAAGCCTGATTCAAATACTGGGCGAATTCAATGTCAAATCTGCTTAAAAAATGGCCATAGTGCCATTGACTACTACAACTAA
Coding sequence (CDS)
ATGGATTCACACCCCAACCAAACCAATTCCTTCCTCCCCCTCCCCAAACACCTCTACCTTCATCGAATACCCAAAGAGAACCCAATCCCAAATACCTCCCATGGACTTACTGAAATCAAGTCCTCATCACTCTCATTAATGCCACTCTATCCACTTCCGCTTTCTCCCATCTTGGTCACCATCGATGATGAAGAGACTCCTCCACATTCTAAATGGCTTACATTCGATTACAACTCATTCCGCACCTCTCTTCGAACTCGCAATACACCGATTACACTTGAAGAGCTCGATGTGTTACTCACCACTGAGGAGAAACCTATTGCTCGCCTAAATTCGGTCAGCAAACCAACACCGACAGCCATGGTCACCGTCAAGTCTTCTGAAAATCGGCAAGGGCCTCGTGGAAATCAACAAGCACCGCATTCCTCCATTTTTAACCCTAATTTTCTTGCAAGTCAGCAACCTAATTTCGACAACTATAGGTGGCGTGGACGTGGGTCAAACCGATTGAATGGATTTGGGCCTTCTCAAGGCTCATTCAGTCTACCAAGCTTTTCCAATGGCCATAATTCTTCACTTAAGCCTGATTCAAATACTGGGCGAATTCAATGTCAAATCTGCTTAAAAAATGGCCATAGTGCCATTGACTACTACAACTAA
Protein sequence
MDSHPNQTNSFLPLPKHLYLHRIPKENPIPNTSHGLTEIKSSSLSLMPLYPLPLSPILVTIDDEETPPHSKWLTFDYNSFRTSLRTRNTPITLEELDVLLTTEEKPIARLNSVSKPTPTAMVTVKSSENRQGPRGNQQAPHSSIFNPNFLASQQPNFDNYRWRGRGSNRLNGFGPSQGSFSLPSFSNGHNSSLKPDSNTGRIQCQICLKNGHSAIDYYN
Homology
BLAST of Bhi11G001034 vs. NCBI nr
Match:
XP_016902697.1 (PREDICTED: uncharacterized protein LOC107991825 [Cucumis melo])
HSP 1 Score: 79.0 bits (193), Expect = 5.8e-11
Identity = 69/191 (36.13%), Postives = 97/191 (50.79%), Query Frame = 0
Query: 59 VTIDDEETPPHS-KWLTFDYNSFRTSLRTRNTPITLEELDVLLTTEEKPIARLNSVSKPT 118
V+++DEE H+ L +N+FRTS+RTRN I+LEEL LL +EE +A+ +++ +
Sbjct: 71 VSLEDEEILVHTLNGLPAAFNAFRTSIRTRNGNISLEELHTLLISEETIMAKTSAI-EAI 130
Query: 119 PTAMVTVKSSENRQGPRGNQQAPHSSIFNPNFLASQQPNFDNYRW----RGRGSNRLNGF 178
PTAM ++ G RG + HS+ NPNF +S + + RG GSN G
Sbjct: 131 PTAMAAFHPPQH-HGSRGRGRRFHST-GNPNFNSSSNSSNRGTNFASGSRGLGSNNNFGT 190
Query: 179 GP--------SQGSFSLPS--------------FSNGHNSSLKPDSNT---GRIQCQICL 220
P + G F PS S H S +P++N+ GRI CQIC
Sbjct: 191 QPNHFRPNYNNHGPFLSPSNFTSVHLNQRGIIGSSLSHGPSFRPETNSGYNGRIFCQICH 250
BLAST of Bhi11G001034 vs. NCBI nr
Match:
TYK06402.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 74.7 bits (182), Expect = 1.1e-09
Identity = 74/234 (31.62%), Postives = 107/234 (45.73%), Query Frame = 0
Query: 28 PIPNTSHGLTEIKSSSLSLMPLYPLPLSPIL-------VTIDDEETPPHS-KWLTFDYNS 87
P P L IK + + Y + ++ V+++DEE H+ L +N+
Sbjct: 21 PCPRCRSALYTIKKTPSESIDKYTSRIKALVDKLAATSVSLEDEEILVHTLNGLLAAFNA 80
Query: 88 FRTSLRTRNTPITLEELDVLLTTEEKPIARLNSVSKPTPTAMVTVKSSENRQGPRGNQQA 147
FRTS+RTRN I+LEEL L +EE +A+ +++ + PTAM ++ RG +
Sbjct: 81 FRTSIRTRNDNISLEELHTLFISEETTMAKTSAI-EAIPTAMAAFHPPQHHDS-RGRGRR 140
Query: 148 PHSSIFNPNFLASQQPNFDNYRW------RGRGSNRLNGFGPSQGSFSLPSFSN------ 207
HS+ NPNF +S PN N RG GSN N FG F P+++N
Sbjct: 141 FHST-GNPNFNSS--PNSSNRGTNFASGSRGLGSN--NNFGTQPNHFR-PNYNNHDRFLP 200
Query: 208 -------------------GHNSSLKPDSN---TGRIQCQICLKNGHSAIDYYN 220
+ S +P++N GRI CQIC K GH A+D YN
Sbjct: 201 PSHFTSVHPNQRGIIGSSPSYGPSFRPETNFGYNGRIFCQICHKQGHGALDCYN 246
BLAST of Bhi11G001034 vs. NCBI nr
Match:
KAA0050146.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 74.7 bits (182), Expect = 1.1e-09
Identity = 74/234 (31.62%), Postives = 107/234 (45.73%), Query Frame = 0
Query: 28 PIPNTSHGLTEIKSSSLSLMPLYPLPLSPIL-------VTIDDEETPPHS-KWLTFDYNS 87
P P L IK + + Y + ++ V+++DEE H+ L +N+
Sbjct: 21 PCPRCRSALYTIKKTPSESIDKYTSRIKALVDKLAATSVSLEDEEILVHTLNGLLAAFNA 80
Query: 88 FRTSLRTRNTPITLEELDVLLTTEEKPIARLNSVSKPTPTAMVTVKSSENRQGPRGNQQA 147
FRTS+RTRN I+LEEL L +EE +A+ +++ + PTAM ++ RG +
Sbjct: 81 FRTSIRTRNDNISLEELHTLFISEETTMAKTSAI-EAIPTAMAAFHPPQHHDS-RGRGRR 140
Query: 148 PHSSIFNPNFLASQQPNFDNYRW------RGRGSNRLNGFGPSQGSFSLPSFSN------ 207
HS+ NPNF +S PN N RG GSN N FG F P+++N
Sbjct: 141 FHST-GNPNFNSS--PNSSNRGTNFASGSRGLGSN--NNFGTQPNHFR-PNYNNHDRFLP 200
Query: 208 -------------------GHNSSLKPDSN---TGRIQCQICLKNGHSAIDYYN 220
+ S +P++N GRI CQIC K GH A+D YN
Sbjct: 201 PSHFTSVHPNQRGIIGSSPSYGPSFRPETNFGYNGRIFCQICHKQGHGALDCYN 246
BLAST of Bhi11G001034 vs. NCBI nr
Match:
XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo])
HSP 1 Score: 70.9 bits (172), Expect = 1.6e-08
Identity = 50/145 (34.48%), Postives = 70/145 (48.28%), Query Frame = 0
Query: 76 DYNSFRTSLRTRNTPITLEELDVLLTTEEKPIARLNSVSKPTPTAMVTVKSSENRQGPRG 135
+YN+FRTS+RTR+ P+T EEL VLL EE +A+ + V + SS++
Sbjct: 192 EYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSSSQS------ 251
Query: 136 NQQAPHSSIFNPNFLASQQPNFDNYRWRGRGSNRLNGFGPSQGSFSLPSFSNGHNSSLKP 195
L S P FDN RG G + G G FS + + GH SS +
Sbjct: 252 --------------LLSCAPTFDNNFVRGNGHGKHYG----HGRFSFDAQTRGHGSSPEQ 311
Query: 196 DS-NTGRIQCQICLKNGHSAIDYYN 220
S + CQIC + GH+A+D +N
Sbjct: 312 KSVHDNHATCQICSRRGHTALDCFN 312
BLAST of Bhi11G001034 vs. NCBI nr
Match:
XP_008448008.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo])
HSP 1 Score: 70.9 bits (172), Expect = 1.6e-08
Identity = 50/145 (34.48%), Postives = 70/145 (48.28%), Query Frame = 0
Query: 76 DYNSFRTSLRTRNTPITLEELDVLLTTEEKPIARLNSVSKPTPTAMVTVKSSENRQGPRG 135
+YN+FRTS+RTR+ P+T EEL VLL EE +A+ + V + SS++
Sbjct: 192 EYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSSSQS------ 251
Query: 136 NQQAPHSSIFNPNFLASQQPNFDNYRWRGRGSNRLNGFGPSQGSFSLPSFSNGHNSSLKP 195
L S P FDN RG G + G G FS + + GH SS +
Sbjct: 252 --------------LLSCAPTFDNNFVRGNGHGKHYG----HGRFSFDAQTRGHGSSPEQ 311
Query: 196 DS-NTGRIQCQICLKNGHSAIDYYN 220
S + CQIC + GH+A+D +N
Sbjct: 312 KSVHDNHATCQICSRRGHTALDCFN 312
BLAST of Bhi11G001034 vs. ExPASy TrEMBL
Match:
A0A1S4E394 (uncharacterized protein LOC107991825 OS=Cucumis melo OX=3656 GN=LOC107991825 PE=4 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 2.8e-11
Identity = 69/191 (36.13%), Postives = 97/191 (50.79%), Query Frame = 0
Query: 59 VTIDDEETPPHS-KWLTFDYNSFRTSLRTRNTPITLEELDVLLTTEEKPIARLNSVSKPT 118
V+++DEE H+ L +N+FRTS+RTRN I+LEEL LL +EE +A+ +++ +
Sbjct: 71 VSLEDEEILVHTLNGLPAAFNAFRTSIRTRNGNISLEELHTLLISEETIMAKTSAI-EAI 130
Query: 119 PTAMVTVKSSENRQGPRGNQQAPHSSIFNPNFLASQQPNFDNYRW----RGRGSNRLNGF 178
PTAM ++ G RG + HS+ NPNF +S + + RG GSN G
Sbjct: 131 PTAMAAFHPPQH-HGSRGRGRRFHST-GNPNFNSSSNSSNRGTNFASGSRGLGSNNNFGT 190
Query: 179 GP--------SQGSFSLPS--------------FSNGHNSSLKPDSNT---GRIQCQICL 220
P + G F PS S H S +P++N+ GRI CQIC
Sbjct: 191 QPNHFRPNYNNHGPFLSPSNFTSVHLNQRGIIGSSLSHGPSFRPETNSGYNGRIFCQICH 250
BLAST of Bhi11G001034 vs. ExPASy TrEMBL
Match:
A0A5A7U7J4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001750 PE=4 SV=1)
HSP 1 Score: 74.7 bits (182), Expect = 5.3e-10
Identity = 74/234 (31.62%), Postives = 107/234 (45.73%), Query Frame = 0
Query: 28 PIPNTSHGLTEIKSSSLSLMPLYPLPLSPIL-------VTIDDEETPPHS-KWLTFDYNS 87
P P L IK + + Y + ++ V+++DEE H+ L +N+
Sbjct: 21 PCPRCRSALYTIKKTPSESIDKYTSRIKALVDKLAATSVSLEDEEILVHTLNGLLAAFNA 80
Query: 88 FRTSLRTRNTPITLEELDVLLTTEEKPIARLNSVSKPTPTAMVTVKSSENRQGPRGNQQA 147
FRTS+RTRN I+LEEL L +EE +A+ +++ + PTAM ++ RG +
Sbjct: 81 FRTSIRTRNDNISLEELHTLFISEETTMAKTSAI-EAIPTAMAAFHPPQHHDS-RGRGRR 140
Query: 148 PHSSIFNPNFLASQQPNFDNYRW------RGRGSNRLNGFGPSQGSFSLPSFSN------ 207
HS+ NPNF +S PN N RG GSN N FG F P+++N
Sbjct: 141 FHST-GNPNFNSS--PNSSNRGTNFASGSRGLGSN--NNFGTQPNHFR-PNYNNHDRFLP 200
Query: 208 -------------------GHNSSLKPDSN---TGRIQCQICLKNGHSAIDYYN 220
+ S +P++N GRI CQIC K GH A+D YN
Sbjct: 201 PSHFTSVHPNQRGIIGSSPSYGPSFRPETNFGYNGRIFCQICHKQGHGALDCYN 246
BLAST of Bhi11G001034 vs. ExPASy TrEMBL
Match:
A0A5D3C579 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001010 PE=4 SV=1)
HSP 1 Score: 74.7 bits (182), Expect = 5.3e-10
Identity = 74/234 (31.62%), Postives = 107/234 (45.73%), Query Frame = 0
Query: 28 PIPNTSHGLTEIKSSSLSLMPLYPLPLSPIL-------VTIDDEETPPHS-KWLTFDYNS 87
P P L IK + + Y + ++ V+++DEE H+ L +N+
Sbjct: 21 PCPRCRSALYTIKKTPSESIDKYTSRIKALVDKLAATSVSLEDEEILVHTLNGLLAAFNA 80
Query: 88 FRTSLRTRNTPITLEELDVLLTTEEKPIARLNSVSKPTPTAMVTVKSSENRQGPRGNQQA 147
FRTS+RTRN I+LEEL L +EE +A+ +++ + PTAM ++ RG +
Sbjct: 81 FRTSIRTRNDNISLEELHTLFISEETTMAKTSAI-EAIPTAMAAFHPPQHHDS-RGRGRR 140
Query: 148 PHSSIFNPNFLASQQPNFDNYRW------RGRGSNRLNGFGPSQGSFSLPSFSN------ 207
HS+ NPNF +S PN N RG GSN N FG F P+++N
Sbjct: 141 FHST-GNPNFNSS--PNSSNRGTNFASGSRGLGSN--NNFGTQPNHFR-PNYNNHDRFLP 200
Query: 208 -------------------GHNSSLKPDSN---TGRIQCQICLKNGHSAIDYYN 220
+ S +P++N GRI CQIC K GH A+D YN
Sbjct: 201 PSHFTSVHPNQRGIIGSSPSYGPSFRPETNFGYNGRIFCQICHKQGHGALDCYN 246
BLAST of Bhi11G001034 vs. ExPASy TrEMBL
Match:
A0A5B7C9B1 (Retrotran_gag_3 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_046931 PE=4 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 6.9e-10
Identity = 64/179 (35.75%), Postives = 87/179 (48.60%), Query Frame = 0
Query: 54 LSPILVTIDDEETPPHS-KWLTFDYNSFRTSLRTRNTPITLEELDVLLTTEEKPIARLNS 113
L+ + V I+DE+ H+ L DYN+F+TS+ TR+ PITLEEL LL EE+ LNS
Sbjct: 167 LAAVSVIIEDEDILIHTLNGLPVDYNAFKTSIHTRSQPITLEELHTLLKAEEQ---TLNS 226
Query: 114 VSKP----TPTAMVTVKSSENR--------QGPRGNQQAPHSSIFNPNFLASQQPNFDNY 173
S P P T+ +S+ R +G RG NF S Q NY
Sbjct: 227 TSVPKSNSLPVFPTTMAASQTRAPTYYNRGRGGRGRSYTRGRGRNYQNFGRSYQ---QNY 286
Query: 174 RWRGRGSNRLNGFGPSQGSFSLPSFSNGHNSSLKPDSNTGRIQCQICLKNGHSAIDYYN 220
+ G+ SN F +Q + S S++ SN +I CQIC K GH A+D Y+
Sbjct: 287 GYAGQSSN--THFSGNQSHYKQGS---SQGSTMSFPSNQSQISCQICNKPGHQALDCYH 334
BLAST of Bhi11G001034 vs. ExPASy TrEMBL
Match:
A0A2N9EP97 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8548 PE=4 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 4.5e-09
Identity = 60/178 (33.71%), Postives = 83/178 (46.63%), Query Frame = 0
Query: 54 LSPILVTIDDEET-PPHSKWLTFDYNSFRTSLRTRNTPITLEELDVLLTTEEKPIARLNS 113
LS + V IDDEE K L +Y+SF S+RT++ ++ EEL LL+TEE + +
Sbjct: 27 LSSVGVQIDDEEVLHIVLKGLPAEYHSFSASMRTKSESVSFEELHALLSTEEDLLRNIQE 86
Query: 114 VSKPTPTAMVTVKSSENRQGPRGNQQAPHSSIFNPNFLASQQPNFDNYRWRGRGSNRLNG 173
+SK T + N +F P Q +N+ GRG N+ N
Sbjct: 87 LSKDTSLMAMAATKPNN--------------VFPPTTTPQQYNGQNNH---GRGRNQFNR 146
Query: 174 FGPSQGSFSLPSFSNGH-----------NSSLKPDSNTG-RIQCQICLKNGHSAIDYY 219
G +GSFS S +G+ NS P+ NT R CQIC K GH+A+D Y
Sbjct: 147 -GKGRGSFSNSSTRDGYNSGNTFGQAAPNSQYSPNLNTNTRPTCQICYKQGHTALDCY 186
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_016902697.1 | 5.8e-11 | 36.13 | PREDICTED: uncharacterized protein LOC107991825 [Cucumis melo] | [more] |
TYK06402.1 | 1.1e-09 | 31.62 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
KAA0050146.1 | 1.1e-09 | 31.62 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
XP_008448007.1 | 1.6e-08 | 34.48 | PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo] | [more] |
XP_008448008.1 | 1.6e-08 | 34.48 | PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
A0A1S4E394 | 2.8e-11 | 36.13 | uncharacterized protein LOC107991825 OS=Cucumis melo OX=3656 GN=LOC107991825 PE=... | [more] |
A0A5A7U7J4 | 5.3e-10 | 31.62 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
A0A5D3C579 | 5.3e-10 | 31.62 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A5B7C9B1 | 6.9e-10 | 35.75 | Retrotran_gag_3 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din... | [more] |
A0A2N9EP97 | 4.5e-09 | 33.71 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8548 PE=4 SV=1 | [more] |