Bhi11G001024 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G001024
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Location	chr11: 35834447 .. 35834647 (+)
RNA-Seq Expression	Bhi11G001024
Synteny	Bhi11G001024

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGACCAGCTACAAGAAAAGACCTCATGATAGTCAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAATTGCAGAAACCCGAACAATTATACAATATCTACCTTATGTAA

mRNA sequence

ATGAATGGACCAGCTACAAGAAAAGACCTCATGATAGTCAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAATTGCAGAAACCCGAACAATTATACAATATCTACCTTATGTAA

Coding sequence (CDS)

ATGAATGGACCAGCTACAAGAAAAGACCTCATGATAGTCAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAATTGCAGAAACCCGAACAATTATACAATATCTACCTTATGTAA

Protein sequence

MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKLQKPEQLYNIYLM

Homology

[Close]

BLAST of Bhi11G001024 vs. TAIR 10
Match: ATCG01110.1 (NAD(P)H dehydrogenase subunit H )

HSP 1 Score: 106.7 bits (265), Expect = 7.3e-24
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          M  P T KDLMIVNMGPHHPSMHGVLRLI+TLDGEDV+DCEPILGYLHRGMEK+
Sbjct: 1  MKRPVTGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 )

HSP 1 Score: 54.7 bits (130), Expect = 3.3e-08
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 0


Query: 14 NMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          N GP HP+ HGV RL+L ++GE V   EP +G LHRG EKL
Sbjct: 14 NFGPQHPAAHGVSRLVLEMNGEVVERAEPHIGSLHRGTEKL 54

[Close]

BLAST of Bhi11G001024 vs. ExPASy Swiss-Prot
Match: Q4VZL2 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhH PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.5e-26
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. ExPASy Swiss-Prot
Match: Q332S1 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Lactuca sativa OX=4236 GN=ndhH PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.9e-25
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          M GPATRKDLMIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MTGPATRKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. ExPASy Swiss-Prot
Match: A7Y3K5 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Ipomoea purpurea OX=4121 GN=ndhH PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-24
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          M  PATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MTAPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. ExPASy Swiss-Prot
Match: Q9BBN8 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Lotus japonicus OX=34305 GN=ndhH PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-24
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MN PATRKDLMIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNVPATRKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. ExPASy Swiss-Prot
Match: B1NWK5 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Manihot esculenta OX=3983 GN=ndhH PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-24
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MN PATRKDLMIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNVPATRKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. NCBI nr
Match: ALO22118.1 (NdhH [Cucurbita ficifolia] >ALO22210.1 NdhH [Cucurbita foetidissima] >ALO22865.1 NdhH [Cucurbita pedatifolia] >QWV60897.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucurbita ficifolia] >QZL38826.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucurbita ficifolia])

HSP 1 Score: 117.9 bits (294), Expect = 3.4e-23
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. NCBI nr
Match: ALO21902.1 (NdhH [Cucurbita cordata] >ALO21965.1 NdhH [Cucurbita digitata])

HSP 1 Score: 117.9 bits (294), Expect = 3.4e-23
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. NCBI nr
Match: YP_009420851.1 (NADH dehydrogenase subunit 7 [Citrullus colocynthis] >YP_009431699.1 NADH dehydrogenase subunit 7 [Citrullus rehmii] >YP_009456203.1 NADH dehydrogenase subunit 7 [Lagenaria siceraria] >QNM38588.1 NADH-plastoquinone oxidoreductase subunit 7 [Lagenaria siceraria var. microcarpa] >QZL38651.1 NADH dehydrogenase subunit H [Citrullus naudinianus] >ASP44514.1 NADH dehydrogenase subunit 7 [Citrullus colocynthis] >ASY96295.1 NADH dehydrogenase subunit 7 [Citrullus rehmii] >AUJ21968.1 NADH dehydrogenase subunit 7 [Lagenaria siceraria])

HSP 1 Score: 117.9 bits (294), Expect = 3.4e-23
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. NCBI nr
Match: YP_004841841.1 (NADH-plastoquinone oxidoreductase subunit 7 [Cucumis melo subsp. melo] >YP_009004097.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucumis hystrix] >YP_009346532.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucumis x hytivus] >YP_009860131.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucumis melo subsp. agrestis] >YP_247656.1 NADH dehydrogenase subunit 7 [Cucumis sativus] >Q4VZL2.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit H, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit H; AltName: Full=NADH-plastoquinone oxidoreductase 49 kDa subunit; AltName: Full=NADH-plastoquinone oxidoreductase subunit H [Cucumis sativus] >ALF03357.1 NADH dehydrogenase subunit 7 [Cucumis sativus var. hardwickii] >ASY96641.1 NADH dehydrogenase subunit 7 [Cucumis melo var. conomon] >ASY96729.1 NADH dehydrogenase subunit 7 [Cucumis melo var. makuwa] >ASY96816.1 NADH dehydrogenase subunit 7 [Cucumis melo var. momordica] >ASY96903.1 NADH dehydrogenase subunit 7 [Cucumis melo var. dudaim] >ASY96990.1 NADH dehydrogenase subunit 7 [Cucumis melo var. cantalupo] >ASY97164.1 NADH dehydrogenase subunit 7 [Cucumis melo var. inodorus] >ASY97338.1 NADH dehydrogenase subunit 7 [Cucumis melo var. flexuosus] >AVE15388.1 NdhH [Cucumis sativus var. sativus] >MBC9855763.1 hypothetical protein [Adiantum capillus-veneris] >QJF46442.1 NADH dehydrogenase subunit 7 [Cucumis melo])

HSP 1 Score: 117.9 bits (294), Expect = 3.4e-23
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. NCBI nr
Match: YP_009753052.1 (NADH dehydrogenase subunit H [Gerrardanthus macrorhizus] >QIT06124.1 NADH dehydrogenase subunit H [Gerrardanthus macrorhizus])

HSP 1 Score: 117.9 bits (294), Expect = 3.4e-23
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. ExPASy TrEMBL
Match: A0A218KGA7 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhH PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. ExPASy TrEMBL
Match: G3ETV5 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=ndhH PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. ExPASy TrEMBL
Match: A0A1X9Q1R4 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhH PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. ExPASy TrEMBL
Match: A0A1S4EU61 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo OX=3656 GN=ndhH PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

[Close]

BLAST of Bhi11G001024 vs. ExPASy TrEMBL
Match: A0A249RZD9 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=ndhH PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKL 55
          MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEK+
Sbjct: 1  MNGPATRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKI 54

The following BLAST results are available for this feature:

BLAST of Bhi11G001024 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01110.1	7.3e-24	87.04	NAD(P)H dehydrogenase subunit H	[more]
ATMG00510.1	3.3e-08	58.54	NADH dehydrogenase subunit 7	[more]

BLAST of Bhi11G001024 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZL2	4.5e-26	98.15	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q332S1	4.9e-25	94.44	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Lactuca sativa OX=423...	[more]
A7Y3K5	1.1e-24	94.44	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Ipomoea purpurea OX=4...	[more]
Q9BBN8	1.1e-24	94.44	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Lotus japonicus OX=34...	[more]
B1NWK5	1.1e-24	94.44	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Manihot esculenta OX=...	[more]

BLAST of Bhi11G001024 vs. NCBI nr


Match Name	E-value	Identity	Description
ALO22118.1	3.4e-23	98.15	NdhH [Cucurbita ficifolia] >ALO22210.1 NdhH [Cucurbita foetidissima] >ALO22865.1...	[more]
ALO21902.1	3.4e-23	98.15	NdhH [Cucurbita cordata] >ALO21965.1 NdhH [Cucurbita digitata]	[more]
YP_009420851.1	3.4e-23	98.15	NADH dehydrogenase subunit 7 [Citrullus colocynthis] >YP_009431699.1 NADH dehydr...	[more]
YP_004841841.1	3.4e-23	98.15	NADH-plastoquinone oxidoreductase subunit 7 [Cucumis melo subsp. melo] >YP_00900...	[more]
YP_009753052.1	3.4e-23	98.15	NADH dehydrogenase subunit H [Gerrardanthus macrorhizus] >QIT06124.1 NADH dehydr...	[more]

BLAST of Bhi11G001024 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KGA7	1.7e-23	98.15	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus var. ...	[more]
G3ETV5	1.7e-23	98.15	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo subsp. m...	[more]
A0A1X9Q1R4	1.7e-23	98.15	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=36...	[more]
A0A1S4EU61	1.7e-23	98.15	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A249RZD9	1.7e-23	98.15	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo var. can...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029014	[NiFe]-hydrogenase, large subunit	GENE3D	1.10.645.10		coord: 10..63 e-value: 5.0E-15 score: 57.1
IPR029014	[NiFe]-hydrogenase, large subunit	SUPERFAMILY	56762	HydB/Nqo4-like	coord: 11..56
None	No IPR available	PANTHER	PTHR11993:SF10	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 2, MITOCHONDRIAL	coord: 6..65
IPR022885	NAD(P)H-quinone oxidoreductase subunit D/H	PANTHER	PTHR11993	NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT	coord: 6..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M001024	Bhi11M001024	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0050136	NADH dehydrogenase (quinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H