Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GATAAGGAGTCGGGAGTACCAATCCTGAAAGGCCAGCTCAAAGATGGGCTATACCAGTTGGAGGATGTCAACCAGTCTATAAATAATGCATCACTTTCTTCAAGATTGTCAAATGCTCGCTTGACTGCTCCATCCAAAGAGTTCTCACGTCAGCCTGCTTTTCAAACCAGCAAGACA GTAACCACAATGCTTCTCCACAGGCGACTTGGCCATCCATCCCCTAA mRNA sequence
GATAAGGAGTCGGGAGTACCAATCCTGAAAGGCCAGCTCAAAGATGGGCTATACCAGTTGGAGGATGTCAACCAGTCTATAAATAATGCATCACTTTCTTCAAGATTGTCAAATGCTCGCTTGACTGCTCCATCCAAAGAGTTCTCACGTCAGCCTGCTTTTCAAACCAGCAAGACAGCGACTTGGCCATCCATCCCCTAA Coding sequence (CDS)
GATAAGGAGTCGGGAGTACCAATCCTGAAAGGCCAGCTCAAAGATGGGCTATACCAGTTGGAGGATGTCAACCAGTCTATAAATAATGCATCACTTTCTTCAAGATTGTCAAATGCTCGCTTGACTGCTCCATCCAAAGAGTTCTCACGTCAGCCTGCTTTTCAAACCAGCAAGACAGCGACTTGGCCATCCATCCCCTAA Protein sequence
DKESGVPILKGQLKDGLYQLEDVNQSINNASLSSRLSNARLTAPSKEFSRQPAFQTSKTATWPSIP
Homology
BLAST of Bhi11G000987 vs. NCBI nr
Match:
XP_038895842.1 (uncharacterized protein LOC120084010 [Benincasa hispida])
HSP 1 Score: 59.7 bits (143), Expect = 1.1e-05
Identity = 34/59 (57.63%), Postives = 39/59 (66.10%), Query Frame = 0
Query: 1 DKESGVPILKGQLKDGLYQLEDVNQSINNASLSSRLSNARLTAPSKEFSRQPAFQTSKT 60 DKESGV +LKG+LKDGLYQL+ V+ INNA SRL A LT S S P F T+ T Sbjct: 175 DKESGVALLKGKLKDGLYQLDIVSSLINNALTRSRLPGASLTTQSSLSSSLPVFTTNIT 233
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
XP_038895842.1 1.1e-05 57.63 uncharacterized protein LOC120084010 [Benincasa hispida] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
G A T A A G G A G T C G G G A G T A C C A A T C C T G A A A G G C C A G C T C A A A G A T G G G C T A T A C C A G T T G G A G G A T G T C A A C C A G T C T A T A A A T A A T G C A T C A C T T T C T T C A A G A T T G T C A A A T G C T C G C T T G A C T G C T C C A T C C A A A G A G T T C T C A C G T C A G C C T G C T T T T C A A A C C A G C A A G A C A G C G A C T T G G C C A T C C A T C C C C T A A 20 40 60 80 100 120 140 160 180 200 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 43..66
Relationships
The following mRNA feature(s) are a part of this gene: