|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCGTTGCGCGGAGATGCGATTCGCCAAGCTGAGGCAAACAAAGTCGTCCAGCCCCCCACCGGATTAGGAATGCGAAGGCCTTTCTCCTTCGAAAGAAGACCCGGGAAAGAAAGAGCTATGCTATTGACCGACCCTTTCATTCTTATCGCTCCAGGTTTTGATCTATATGACCTCCGAGCGGTACAAAGTCAACCTCTTCCGTAG mRNA sequence ATGTCGTTGCGCGGAGATGCGATTCGCCAAGCTGAGGCAAACAAAGTCGTCCAGCCCCCCACCGGATTAGGAATGCGAAGGCCTTTCTCCTTCGAAAGAAGACCCGGGAAAGAAAGAGCTATGCTATTGACCGACCCTTTCATTCTTATCGCTCCAGGTTTTGATCTATATGACCTCCGAGCGGTACAAAGTCAACCTCTTCCGTAG Coding sequence (CDS) ATGTCGTTGCGCGGAGATGCGATTCGCCAAGCTGAGGCAAACAAAGTCGTCCAGCCCCCCACCGGATTAGGAATGCGAAGGCCTTTCTCCTTCGAAAGAAGACCCGGGAAAGAAAGAGCTATGCTATTGACCGACCCTTTCATTCTTATCGCTCCAGGTTTTGATCTATATGACCTCCGAGCGGTACAAAGTCAACCTCTTCCGTAG Protein sequence MSLRGDAIRQAEANKVVQPPTGLGMRRPFSFERRPGKERAMLLTDPFILIAPGFDLYDLRAVQSQPLP
Homology
BLAST of Bhi11G000985 vs. NCBI nr
Match: WP_205680963.1 (hypothetical protein, partial [Acinetobacter baumannii]) HSP 1 Score: 79.7 bits (195), Expect = 1.1e-11 Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 0 Query: 1 MSLRGDAIRQAEANKVVQPPTGLGMRRPFSFERRPGKERAMLLTDPFILIAPGFDLYDLR 60 MSLRGDAIRQA ANK V+P L +P GKE+AMLLTDPF+LIA GFDLYDLR Sbjct: 1 MSLRGDAIRQAGANKAVRPEIRLSKEKP-----SKGKEKAMLLTDPFVLIALGFDLYDLR 58
Query: 61 AVQ 64 AV+ Sbjct: 61 AVK 58
BLAST of Bhi11G000985 vs. NCBI nr
Match: EEF27697.1 (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 63.2 bits (152), Expect = 1.0e-06 Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0 Query: 1 MSLRGDAIRQAEANKVVQP---PTGLGMRRPFSFERRPGKERAMLLTDPFIL 50 MSLRGDAIRQA ANK V+P G G+ SFE+RPGKERAMLLTDPF++ Sbjct: 1 MSLRGDAIRQAGANKDVRPYRIRNGEGL----SFEKRPGKERAMLLTDPFVV 48
BLAST of Bhi11G000985 vs. NCBI nr
Match: KAF3949772.1 (hypothetical protein CMV_024397 [Castanea mollissima]) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04 Identity = 31/56 (55.36%), Postives = 35/56 (62.50%), Query Frame = 0 Query: 1 MSLRGDAIRQAEANKVVQPPTGLGMRRPFSFERRPGKERAMLLTDPFILIAPGFDL 57 MSLRG AIRQA ANK V+PPTGLGMRRPF R+ ++R D PG L Sbjct: 1 MSLRGGAIRQAGANKAVRPPTGLGMRRPFL--RKETRDRKSYAIDRPFRSRPGLSL 54
BLAST of Bhi11G000985 vs. ExPASy TrEMBL
Match: B9T8W4 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2007230 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.0e-07 Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0 Query: 1 MSLRGDAIRQAEANKVVQP---PTGLGMRRPFSFERRPGKERAMLLTDPFIL 50 MSLRGDAIRQA ANK V+P G G+ SFE+RPGKERAMLLTDPF++ Sbjct: 1 MSLRGDAIRQAGANKDVRPYRIRNGEGL----SFEKRPGKERAMLLTDPFVV 48
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
WP_205680963.1 | 1.1e-11 | 66.67 | hypothetical protein, partial [Acinetobacter baumannii] | [more] |
EEF27697.1 | 1.0e-06 | 67.31 | conserved hypothetical protein [Ricinus communis] | [more] |
KAF3949772.1 | 1.3e-04 | 55.36 | hypothetical protein CMV_024397 [Castanea mollissima] | [more] |
Match Name | E-value | Identity | Description | |
B9T8W4 | 5.0e-07 | 67.31 | Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2007230 PE=4 SV=1 | [more] |
Relationships
The following mRNA feature(s) are a part of this gene:
|