Bhi11G000169 (gene) Wax gourd (B227) v1

Overview
NameBhi11G000169
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr11: 4367674 .. 4368105 (+)
RNA-Seq ExpressionBhi11G000169
SyntenyBhi11G000169
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAGGATAAAGGTGAGGGTGGGACTGCTGGATGATCGACACGATCTACATGCACAAGAGGACCAGAGCGACAATGATCAGGTTAGGTGGGCTAGCCCTTGAGATGGCTGGCTGGCTCTATAGTGTGATGCCACCCATTGCAAGGGTGGTATCGGTTGGGTACTTCAAGACCATAAGGGAGTGCTCATTGTTGCTGGTGTAAAAGCTATGAAAGAAACTTATGATGTGTTGTATGTTGAGACTAGTGCAATTGCTGAAGGACTCGATGTGGTGATTGTGAGGGTGTATCTAGCTTTAATGGTGGAGTCAGATTGCGTAACAATTATATGCTTGTTGATTGACGAGGAAGAGGTGCTTACTTTAGTTAAATCAGTAGCGGAGGAGATCATGTCATCGAAGACTCAATATGAGGTTCAATTTCATCACATTTGA

mRNA sequence

GGAAGGATAAAGGTGAGGGTGGGACTGCTGGATGATCGACACGATCTACATGCACAAGAGGACCAGAGCGACAATGATCAGTGTGATGCCACCCATTGCAAGGGTGGTATCGGTTGGGTACTTCAAGACCATAAGGGAGTGCTCATTGTTGCTGGTGTAAAAGCTATGAAAGAAACTTATGATGTGTTGTATGTTGAGACTAGTGCAATTGCTGAAGGACTCGATGTGGTGATTGTGAGGGTGTATCTAGCTTTAATGGTGGAGTCAGATTGCGTAACAATTATATGCTTGTTGATTGACGAGGAAGAGGTGCTTACTTTAGTTAAATCAGTAGCGGAGGAGATCATGTCATCGAAGACTCAATATGAGGTTCAATTTCATCACATTTGA

Coding sequence (CDS)

GGAAGGATAAAGGTGAGGGTGGGACTGCTGGATGATCGACACGATCTACATGCACAAGAGGACCAGAGCGACAATGATCAGTGTGATGCCACCCATTGCAAGGGTGGTATCGGTTGGGTACTTCAAGACCATAAGGGAGTGCTCATTGTTGCTGGTGTAAAAGCTATGAAAGAAACTTATGATGTGTTGTATGTTGAGACTAGTGCAATTGCTGAAGGACTCGATGTGGTGATTGTGAGGGTGTATCTAGCTTTAATGGTGGAGTCAGATTGCGTAACAATTATATGCTTGTTGATTGACGAGGAAGAGGTGCTTACTTTAGTTAAATCAGTAGCGGAGGAGATCATGTCATCGAAGACTCAATATGAGGTTCAATTTCATCACATTTGA

Protein sequence

GRIKVRVGLLDDRHDLHAQEDQSDNDQCDATHCKGGIGWVLQDHKGVLIVAGVKAMKETYDVLYVETSAIAEGLDVVIVRVYLALMVESDCVTIICLLIDEEEVLTLVKSVAEEIMSSKTQYEVQFHHI
Homology
The following BLAST results are available for this feature:
BLAST of Bhi11G000169 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G000169 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G000169 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G000169 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 33..129
e-value: 4.1E-12
score: 46.0
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 34..129
e-value: 4.33294E-9
score: 48.8496

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M000169Bhi11M000169mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity