Bhi11G000164 (gene) Wax gourd (B227) v1

Overview
NameBhi11G000164
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionsmall heat shock protein, chloroplastic-like isoform X2
Locationchr11: 4189607 .. 4189849 (+)
RNA-Seq ExpressionBhi11G000164
SyntenyBhi11G000164
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTGTTGGATTGCTCTCCGAAGGCTTGGCGCTTCCTCCGCCGGTAAGCTTTTCAATCCTGTTCGCTCCGCCTTTGCTCTCCCCACCGCTGTCGGTCGTTCATTCAACACCAATGCTCAGATGACCAACTACGCGGATGACGACCGCTCTGTCGATGTGGATCGCCGCGCCGACCGCTCTCTCGTTCTCGTGGTCGCTTCCCTGGTTTTGCCGGTAGTTGTTTTCTTCGTCCGTGTTTGA

mRNA sequence

ATGGTGTGTTGGATTGCTCTCCGAAGGCTTGGCGCTTCCTCCGCCGGTAAGCTTTTCAATCCTGTTCGCTCCGCCTTTGCTCTCCCCACCGCTGTCGGTCGTTCATTCAACACCAATGCTCAGATGACCAACTACGCGGATGACGACCGCTCTGTCGATGTGGATCGCCGCGCCGACCGCTCTCTCGTTCTCGTGGTCGCTTCCCTGGTTTTGCCGGTAGTTGTTTTCTTCGTCCGTGTTTGA

Coding sequence (CDS)

ATGGTGTGTTGGATTGCTCTCCGAAGGCTTGGCGCTTCCTCCGCCGGTAAGCTTTTCAATCCTGTTCGCTCCGCCTTTGCTCTCCCCACCGCTGTCGGTCGTTCATTCAACACCAATGCTCAGATGACCAACTACGCGGATGACGACCGCTCTGTCGATGTGGATCGCCGCGCCGACCGCTCTCTCGTTCTCGTGGTCGCTTCCCTGGTTTTGCCGGTAGTTGTTTTCTTCGTCCGTGTTTGA

Protein sequence

MVCWIALRRLGASSAGKLFNPVRSAFALPTAVGRSFNTNAQMTNYADDDRSVDVDRRADRSLVLVVASLVLPVVVFFVRV
Homology
BLAST of Bhi11G000164 vs. NCBI nr
Match: KAA0041092.1 (small heat shock protein [Cucumis melo var. makuwa] >TYK12017.1 small heat shock protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 1.7e-16
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 1  MVCWIALRRLGASSAGKLFNPVRSAFALPTAVGRSFNTNAQMTNYADDDRSVDVDRRADR 60
          M   IALRRL ASSA KLFNPVRSA  LP+++ RSFNTNAQMTNY DDDRSVDVDRR+DR
Sbjct: 1  MASSIALRRLAASSAAKLFNPVRSASVLPSSLARSFNTNAQMTNYDDDDRSVDVDRRSDR 60

Query: 61 SL 63
          SL
Sbjct: 61 SL 62

BLAST of Bhi11G000164 vs. NCBI nr
Match: XP_038903254.1 (small heat shock protein, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 95.5 bits (236), Expect = 2.2e-16
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 1  MVCWIALRRLGASSAGKLFNPVRSAFALPTAVGRSFNTNAQMTNYADDDRSVDVDRRADR 60
          M   IALRRL ASSA KLFNPVRSA  LP+++GRSFNTNA MTNYADDD SVDVDRR+DR
Sbjct: 1  MASSIALRRLAASSAAKLFNPVRSASVLPSSLGRSFNTNAHMTNYADDDCSVDVDRRSDR 60

Query: 61 SL 63
          SL
Sbjct: 61 SL 62

BLAST of Bhi11G000164 vs. NCBI nr
Match: XP_038903255.1 (small heat shock protein, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 95.5 bits (236), Expect = 2.2e-16
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 1  MVCWIALRRLGASSAGKLFNPVRSAFALPTAVGRSFNTNAQMTNYADDDRSVDVDRRADR 60
          M   IALRRL ASSA KLFNPVRSA  LP+++GRSFNTNA MTNYADDD SVDVDRR+DR
Sbjct: 1  MASSIALRRLAASSAAKLFNPVRSASVLPSSLGRSFNTNAHMTNYADDDCSVDVDRRSDR 60

Query: 61 SL 63
          SL
Sbjct: 61 SL 62

BLAST of Bhi11G000164 vs. NCBI nr
Match: XP_008448852.1 (PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 2.9e-16
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 1  MVCWIALRRLGASSAGKLFNPVRSAFALPTAVGRSFNTNAQMTNYADDDRSVDVDRRADR 60
          M   IALRRL ASSA KLFNPVRSA  LP+++ RSFNTNAQMTNY DDDRSVDVDRR+DR
Sbjct: 1  MASSIALRRLAASSATKLFNPVRSASVLPSSLARSFNTNAQMTNYDDDDRSVDVDRRSDR 60

Query: 61 SL 63
          SL
Sbjct: 61 SL 62

BLAST of Bhi11G000164 vs. NCBI nr
Match: XP_008448853.1 (PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 2.9e-16
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 1  MVCWIALRRLGASSAGKLFNPVRSAFALPTAVGRSFNTNAQMTNYADDDRSVDVDRRADR 60
          M   IALRRL ASSA KLFNPVRSA  LP+++ RSFNTNAQMTNY DDDRSVDVDRR+DR
Sbjct: 1  MASSIALRRLAASSATKLFNPVRSASVLPSSLARSFNTNAQMTNYDDDDRSVDVDRRSDR 60

Query: 61 SL 63
          SL
Sbjct: 61 SL 62

BLAST of Bhi11G000164 vs. ExPASy TrEMBL
Match: A0A5A7TCA0 (Small heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00260 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.1e-17
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 1  MVCWIALRRLGASSAGKLFNPVRSAFALPTAVGRSFNTNAQMTNYADDDRSVDVDRRADR 60
          M   IALRRL ASSA KLFNPVRSA  LP+++ RSFNTNAQMTNY DDDRSVDVDRR+DR
Sbjct: 1  MASSIALRRLAASSAAKLFNPVRSASVLPSSLARSFNTNAQMTNYDDDDRSVDVDRRSDR 60

Query: 61 SL 63
          SL
Sbjct: 61 SL 62

BLAST of Bhi11G000164 vs. ExPASy TrEMBL
Match: A0A1S3BKN7 (small heat shock protein, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490889 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.4e-16
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 1  MVCWIALRRLGASSAGKLFNPVRSAFALPTAVGRSFNTNAQMTNYADDDRSVDVDRRADR 60
          M   IALRRL ASSA KLFNPVRSA  LP+++ RSFNTNAQMTNY DDDRSVDVDRR+DR
Sbjct: 1  MASSIALRRLAASSATKLFNPVRSASVLPSSLARSFNTNAQMTNYDDDDRSVDVDRRSDR 60

Query: 61 SL 63
          SL
Sbjct: 61 SL 62

BLAST of Bhi11G000164 vs. ExPASy TrEMBL
Match: A0A1S3BKP0 (small heat shock protein, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490889 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.4e-16
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 1  MVCWIALRRLGASSAGKLFNPVRSAFALPTAVGRSFNTNAQMTNYADDDRSVDVDRRADR 60
          M   IALRRL ASSA KLFNPVRSA  LP+++ RSFNTNAQMTNY DDDRSVDVDRR+DR
Sbjct: 1  MASSIALRRLAASSATKLFNPVRSASVLPSSLARSFNTNAQMTNYDDDDRSVDVDRRSDR 60

Query: 61 SL 63
          SL
Sbjct: 61 SL 62

BLAST of Bhi11G000164 vs. ExPASy TrEMBL
Match: A0A0A0L494 (Mitochondrial small heat shock protein OS=Cucumis sativus OX=3659 GN=Csa_3G020080 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.0e-16
Identity = 49/62 (79.03%), Postives = 52/62 (83.87%), Query Frame = 0

Query: 1  MVCWIALRRLGASSAGKLFNPVRSAFALPTAVGRSFNTNAQMTNYADDDRSVDVDRRADR 60
          M   IALRRL ASSA KLFNPVRSA  LP++V RSFNTNAQMTNY DDDRSVDVD R+DR
Sbjct: 1  MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60

Query: 61 SL 63
          SL
Sbjct: 61 SL 62

BLAST of Bhi11G000164 vs. ExPASy TrEMBL
Match: H6TB40 (HSP23.5 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-15
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 1  MVCWIALRRLGASSAGKLFNPVRSAFALPTAVGRSFNTNAQMTNYADDDRSVDVDRRADR 60
          M   IALRRL ASSA KLF+PVRSA  LP +VGRSFNTNAQMTNYADDDRSVDVDR +DR
Sbjct: 1  MASSIALRRLAASSAAKLFSPVRSASVLP-SVGRSFNTNAQMTNYADDDRSVDVDRGSDR 60

Query: 61 SL 63
          S+
Sbjct: 61 SI 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0041092.11.7e-1679.03small heat shock protein [Cucumis melo var. makuwa] >TYK12017.1 small heat shock... [more]
XP_038903254.12.2e-1679.03small heat shock protein, chloroplastic-like isoform X1 [Benincasa hispida][more]
XP_038903255.12.2e-1679.03small heat shock protein, chloroplastic-like isoform X2 [Benincasa hispida][more]
XP_008448852.12.9e-1679.03PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis melo... [more]
XP_008448853.12.9e-1679.03PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo... [more]
Match NameE-valueIdentityDescription
A0A5A7TCA08.1e-1779.03Small heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3BKN71.4e-1679.03small heat shock protein, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 ... [more]
A0A1S3BKP01.4e-1679.03small heat shock protein, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 ... [more]
A0A0A0L4949.0e-1679.03Mitochondrial small heat shock protein OS=Cucumis sativus OX=3659 GN=Csa_3G02008... [more]
H6TB402.0e-1579.03HSP23.5 OS=Citrullus lanatus OX=3654 PE=2 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M000164Bhi11M000164mRNA