Bhi11G000140 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G000140
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Ubiquitin carboxyl-terminal hydrolase
Location	chr11: 3674715 .. 3675361 (+)
RNA-Seq Expression	Bhi11G000140
Synteny	Bhi11G000140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAGGCTGGAAATGAAGCCATGGGAGACGATACGCCGACACCAACCCCGACTCCGACGCCGACTTTGAGCTCATCATCAGAGGCTGCGAGTAGACACGTAGTCGTCGTCATGGATGGAATGGAAGAGTTCACCACGGAGCCACTCAAGTGGGCGTTGGATAATGTTATTAAGCCTGGTTGCGTCGTTACTCTCATCGGTGCAATGCCGTGGCTCAATATTCCTCGTTAGTTCTTTCATTTTTTTTTTGTCAAGTGTAAGATTCTTCTAGTGGTTTGTGAAGATCATTACAAAAATTAATTTGGTTTGATGTAAACTATGTAGTTTCATCCAAAACATGGTTGGATATTTGGCCAATAAATTTGGAGGAGATGTCCTTTGAGAGAGGGGAAAGGGAGTACCTTAGTGAAGCCAAGTATGCTAAACTTGAAGCTGTGATATCACTCTGTAGAAAATATGGGGTATTTATTTTATTTTATTTTTGGTTATTATTTTCAAAGCATATTTTATCATTGAATTTGTATTATTACTTTTCTTTTCAGGTTGTGCCACAAAAAAAAGTTATAATGGGTCATCCACTTAGATTGCTTATTGTTGAGCAAATCTCCAGCCTTCATGCAACATGGGTTGTATTTGATAAGTAA

mRNA sequence

ATGGCAGAGGCTGGAAATGAAGCCATGGGAGACGATACGCCGACACCAACCCCGACTCCGACGCCGACTTTGAGCTCATCATCAGAGGCTGCGAGTAGACACGTAGTCGTCGTCATGGATGGAATGGAAGAGTTCACCACGGAGCCACTCAAGTGGGCGTTGGATAATGTTATTAAGCCTGGTTGCGTCGTTACTCTCATCGGTGCAATGCCGTGGCTCAATATTCCTCTTTCATCCAAAACATGGTTGGATATTTGGCCAATAAATTTGGAGGAGATGTCCTTTGAGAGAGGGGAAAGGGAGTACCTTAGTGAAGCCAAGTATGCTAAACTTGAAGCTGTGATATCACTCTGTAGAAAATATGGGGTTGTGCCACAAAAAAAAGTTATAATGGGTCATCCACTTAGATTGCTTATTGTTGAGCAAATCTCCAGCCTTCATGCAACATGGGTTGTATTTGATAAGTAA

Coding sequence (CDS)

ATGGCAGAGGCTGGAAATGAAGCCATGGGAGACGATACGCCGACACCAACCCCGACTCCGACGCCGACTTTGAGCTCATCATCAGAGGCTGCGAGTAGACACGTAGTCGTCGTCATGGATGGAATGGAAGAGTTCACCACGGAGCCACTCAAGTGGGCGTTGGATAATGTTATTAAGCCTGGTTGCGTCGTTACTCTCATCGGTGCAATGCCGTGGCTCAATATTCCTCTTTCATCCAAAACATGGTTGGATATTTGGCCAATAAATTTGGAGGAGATGTCCTTTGAGAGAGGGGAAAGGGAGTACCTTAGTGAAGCCAAGTATGCTAAACTTGAAGCTGTGATATCACTCTGTAGAAAATATGGGGTTGTGCCACAAAAAAAAGTTATAATGGGTCATCCACTTAGATTGCTTATTGTTGAGCAAATCTCCAGCCTTCATGCAACATGGGTTGTATTTGATAAGTAA

Protein sequence

MAEAGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKPGCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRKYGVVPQKKVIMGHPLRLLIVEQISSLHATWVVFDK

Homology

[Close]

BLAST of Bhi11G000140 vs. NCBI nr
Match: XP_038903690.1 (uncharacterized protein LOC120090215 isoform X2 [Benincasa hispida])

HSP 1 Score: 314.7 bits (805), Expect = 4.5e-82
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MAEAGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKP 60
           MAEAGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKP
Sbjct: 1   MAEAGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKP 60

Query: 61  GCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRK 120
           GCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRK
Sbjct: 61  GCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRK 120

Query: 121 YGVVPQKKVIMGHPLRLLIVEQISSLHATWVVFDK 156
           YGVVPQKKVIMGHPLRLLIVEQISSLHATWVVFDK
Sbjct: 121 YGVVPQKKVIMGHPLRLLIVEQISSLHATWVVFDK 155

[Close]

BLAST of Bhi11G000140 vs. NCBI nr
Match: XP_038903689.1 (uncharacterized protein LOC120090215 isoform X1 [Benincasa hispida])

HSP 1 Score: 300.1 bits (767), Expect = 1.1e-77
Identity = 155/182 (85.16%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MAEAGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKP 60
           MAEAGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKP
Sbjct: 1   MAEAGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKP 60

Query: 61  GCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRK 120
           GCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRK
Sbjct: 61  GCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRK 120

Query: 121 YG---------------------------VVPQKKVIMGHPLRLLIVEQISSLHATWVVF 156
           YG                           VVPQKKVIMGHPLRLLIVEQISSLHATWVVF
Sbjct: 121 YGVFILFYFWLLFSKHILSLNLYYYFSFQVVPQKKVIMGHPLRLLIVEQISSLHATWVVF 180

[Close]

BLAST of Bhi11G000140 vs. NCBI nr
Match: XP_011652714.1 (uncharacterized protein DDB_G0290685 isoform X1 [Cucumis sativus] >KAE8650025.1 hypothetical protein Csa_010541 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 3.4e-74
Identity = 143/163 (87.73%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 1   MAEAGNEAMGDD--------TPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKW 60
           MA AGNE M DD        TPTPTPTPTPTLSS+SEAASRHVVVVMDGMEEFTT+PLKW
Sbjct: 1   MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW 60

Query: 61  ALDNVIKPGCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLE 120
           ALDNVIKPGC+VTL+GAMPWLNIPLSSKTWLDIWPINLEEMSFE  EREY+SEAKYAKLE
Sbjct: 61  ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120

Query: 121 AVISLCRKYGVVPQKKVIMGHPLRLLIVEQISSLHATWVVFDK 156
           AV+SLCRKYGVVPQKKV+MGHPLRLLIVEQISSLHATWVVFDK
Sbjct: 121 AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 163

[Close]

BLAST of Bhi11G000140 vs. NCBI nr
Match: XP_008448679.1 (PREDICTED: uncharacterized protein LOC103490778 isoform X1 [Cucumis melo])

HSP 1 Score: 285.4 bits (729), Expect = 2.9e-73
Identity = 138/155 (89.03%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MAEAGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKP 60
           MA AGNE M DDT TPTPTPTPTLSS+SEAA+RHVVVVMDGMEEFTT PL+WALDNVIKP
Sbjct: 1   MAGAGNEDMEDDTRTPTPTPTPTLSSTSEAANRHVVVVMDGMEEFTTHPLEWALDNVIKP 60

Query: 61  GCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRK 120
           GC+VTL+GAMPWLNIPLSSKTWLDIWPINLEEMSFE  EREY+SEAKYAKLEAV+SLC+K
Sbjct: 61  GCLVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCKK 120

Query: 121 YGVVPQKKVIMGHPLRLLIVEQISSLHATWVVFDK 156
           YGVVPQKKV+MGHPLRLLIVE+ISSLHATWVVFDK
Sbjct: 121 YGVVPQKKVVMGHPLRLLIVEKISSLHATWVVFDK 155

[Close]

BLAST of Bhi11G000140 vs. NCBI nr
Match: KAA0053040.1 (ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis melo var. makuwa] >TYK11495.1 ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 282.3 bits (721), Expect = 2.5e-72
Identity = 136/152 (89.47%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 4   AGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKPGCV 63
           AGNE M DDT TPTPTPTPTLSS+SEAA+RHVVVVMDGMEEFTT PL+WALDNVIKPGC+
Sbjct: 653 AGNEDMEDDTRTPTPTPTPTLSSTSEAANRHVVVVMDGMEEFTTHPLEWALDNVIKPGCL 712

Query: 64  VTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRKYGV 123
           VTL+GAMPWLNIPLSSKTWLDIWPINLEEMSFE  EREY+SEAKYAKLEAV+SLC+KYGV
Sbjct: 713 VTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCKKYGV 772

Query: 124 VPQKKVIMGHPLRLLIVEQISSLHATWVVFDK 156
           VPQKKV+MGHPLRLLIVE+ISSLHATWVVFDK
Sbjct: 773 VPQKKVVMGHPLRLLIVEKISSLHATWVVFDK 804

[Close]

BLAST of Bhi11G000140 vs. ExPASy TrEMBL
Match: A0A0A0L195 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011090 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.7e-74
Identity = 143/163 (87.73%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 1   MAEAGNEAMGDD--------TPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKW 60
           MA AGNE M DD        TPTPTPTPTPTLSS+SEAASRHVVVVMDGMEEFTT+PLKW
Sbjct: 1   MAGAGNEDMEDDTPTPTPTQTPTPTPTPTPTLSSTSEAASRHVVVVMDGMEEFTTDPLKW 60

Query: 61  ALDNVIKPGCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLE 120
           ALDNVIKPGC+VTL+GAMPWLNIPLSSKTWLDIWPINLEEMSFE  EREY+SEAKYAKLE
Sbjct: 61  ALDNVIKPGCIVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLE 120

Query: 121 AVISLCRKYGVVPQKKVIMGHPLRLLIVEQISSLHATWVVFDK 156
           AV+SLCRKYGVVPQKKV+MGHPLRLLIVEQISSLHATWVVFDK
Sbjct: 121 AVVSLCRKYGVVPQKKVVMGHPLRLLIVEQISSLHATWVVFDK 163

[Close]

BLAST of Bhi11G000140 vs. ExPASy TrEMBL
Match: A0A1S3BJN1 (uncharacterized protein LOC103490778 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490778 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.4e-73
Identity = 138/155 (89.03%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MAEAGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKP 60
           MA AGNE M DDT TPTPTPTPTLSS+SEAA+RHVVVVMDGMEEFTT PL+WALDNVIKP
Sbjct: 1   MAGAGNEDMEDDTRTPTPTPTPTLSSTSEAANRHVVVVMDGMEEFTTHPLEWALDNVIKP 60

Query: 61  GCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRK 120
           GC+VTL+GAMPWLNIPLSSKTWLDIWPINLEEMSFE  EREY+SEAKYAKLEAV+SLC+K
Sbjct: 61  GCLVTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCKK 120

Query: 121 YGVVPQKKVIMGHPLRLLIVEQISSLHATWVVFDK 156
           YGVVPQKKV+MGHPLRLLIVE+ISSLHATWVVFDK
Sbjct: 121 YGVVPQKKVVMGHPLRLLIVEKISSLHATWVVFDK 155

[Close]

BLAST of Bhi11G000140 vs. ExPASy TrEMBL
Match: A0A5D3CIU8 (Ubiquitin carboxyl-terminal hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001590 PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-72
Identity = 136/152 (89.47%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 4   AGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKPGCV 63
           AGNE M DDT TPTPTPTPTLSS+SEAA+RHVVVVMDGMEEFTT PL+WALDNVIKPGC+
Sbjct: 653 AGNEDMEDDTRTPTPTPTPTLSSTSEAANRHVVVVMDGMEEFTTHPLEWALDNVIKPGCL 712

Query: 64  VTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRKYGV 123
           VTL+GAMPWLNIPLSSKTWLDIWPINLEEMSFE  EREY+SEAKYAKLEAV+SLC+KYGV
Sbjct: 713 VTLVGAMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCKKYGV 772

Query: 124 VPQKKVIMGHPLRLLIVEQISSLHATWVVFDK 156
           VPQKKV+MGHPLRLLIVE+ISSLHATWVVFDK
Sbjct: 773 VPQKKVVMGHPLRLLIVEKISSLHATWVVFDK 804

[Close]

BLAST of Bhi11G000140 vs. ExPASy TrEMBL
Match: A0A1S3BKA1 (uncharacterized protein LOC103490778 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490778 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70
Identity = 132/147 (89.80%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 9   MGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKPGCVVTLIG 68
           M DDT TPTPTPTPTLSS+SEAA+RHVVVVMDGMEEFTT PL+WALDNVIKPGC+VTL+G
Sbjct: 1   MEDDTRTPTPTPTPTLSSTSEAANRHVVVVMDGMEEFTTHPLEWALDNVIKPGCLVTLVG 60

Query: 69  AMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRKYGVVPQKK 128
           AMPWLNIPLSSKTWLDIWPINLEEMSFE  EREY+SEAKYAKLEAV+SLC+KYGVVPQKK
Sbjct: 61  AMPWLNIPLSSKTWLDIWPINLEEMSFEGVEREYISEAKYAKLEAVVSLCKKYGVVPQKK 120

Query: 129 VIMGHPLRLLIVEQISSLHATWVVFDK 156
           V+MGHPLRLLIVE+ISSLHATWVVFDK
Sbjct: 121 VVMGHPLRLLIVEKISSLHATWVVFDK 147

[Close]

BLAST of Bhi11G000140 vs. ExPASy TrEMBL
Match: A0A6J1L5D0 (uncharacterized protein LOC111500162 OS=Cucurbita maxima OX=3661 GN=LOC111500162 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.7e-69
Identity = 132/155 (85.16%), Postives = 143/155 (92.26%), Query Frame = 0


Query: 1   MAEAGNEAMGDDTPTPTPTPTPTLSSSSEAASRHVVVVMDGMEEFTTEPLKWALDNVIKP 60
           MAEAG+EAMGDD    TPTPTP+ SSSSEAA+RH+VVVMDGMEEFTT+PL+WALDN+IKP
Sbjct: 1   MAEAGDEAMGDD-DMATPTPTPSFSSSSEAANRHIVVVMDGMEEFTTKPLEWALDNIIKP 60

Query: 61  GCVVTLIGAMPWLNIPLSSKTWLDIWPINLEEMSFERGEREYLSEAKYAKLEAVISLCRK 120
           GCVVTLIGAMPWLNIPLSSKTWLDIWP NLEEM F RGERE ++E KYAKLEAV+SLC +
Sbjct: 61  GCVVTLIGAMPWLNIPLSSKTWLDIWPFNLEEMPFVRGERECITEPKYAKLEAVLSLCTQ 120

Query: 121 YGVVPQKKVIMGHPLRLLIVEQISSLHATWVVFDK 156
           YGVVPQKKVIMGHPLRLLIVEQIS LHATWVVFDK
Sbjct: 121 YGVVPQKKVIMGHPLRLLIVEQISGLHATWVVFDK 154

The following BLAST results are available for this feature:

BLAST of Bhi11G000140 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G000140 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G000140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903690.1	4.5e-82	100.00	uncharacterized protein LOC120090215 isoform X2 [Benincasa hispida]	[more]
XP_038903689.1	1.1e-77	85.16	uncharacterized protein LOC120090215 isoform X1 [Benincasa hispida]	[more]
XP_011652714.1	3.4e-74	87.73	uncharacterized protein DDB_G0290685 isoform X1 [Cucumis sativus] >KAE8650025.1 ...	[more]
XP_008448679.1	2.9e-73	89.03	PREDICTED: uncharacterized protein LOC103490778 isoform X1 [Cucumis melo]	[more]
KAA0053040.1	2.5e-72	89.47	ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis melo var. makuwa] >TYK114...	[more]

BLAST of Bhi11G000140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L195	1.7e-74	87.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011090 PE=4 SV=1	[more]
A0A1S3BJN1	1.4e-73	89.03	uncharacterized protein LOC103490778 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3CIU8	1.2e-72	89.47	Ubiquitin carboxyl-terminal hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BKA1	1.5e-70	89.80	uncharacterized protein LOC103490778 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1L5D0	4.7e-69	85.16	uncharacterized protein LOC111500162 OS=Cucurbita maxima OX=3661 GN=LOC111500162...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 23..154 e-value: 6.2E-5 score: 25.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR33563:SF9	SUBFAMILY NOT NAMED	coord: 25..155
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 33..152
IPR002812	3-dehydroquinate synthase	PANTHER	PTHR33563	FAMILY NOT NAMED	coord: 25..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000140	Bhi11M000140	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0008652	cellular amino acid biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0003856	3-dehydroquinate synthase activity
molecular_function	GO:0042973	glucan endo-1,3-beta-D-glucosidase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0004843	thiol-dependent deubiquitinase