Bhi10G001803 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G001803
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	CCHC-type domain-containing protein
Location	chr10: 56721013 .. 56721288 (-)
RNA-Seq Expression	Bhi10G001803
Synteny	Bhi10G001803

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATTTTCTTCGATCCGAGGAATATTGGGAGTTGGTAGAACCTGGATATATTGAACCAGTTAGCGGATCGTTGCAAGAGGAAGTCCAACGAAAGAAAAATGATGAAATGAAGCTGAAAGAATTGAAAGTGAACATTTATCTCATGCAAACAATTGATCACATAATTCTGGGCACCATTCTCAAGAAAATACTGCCAAAGAAGTATTGGATGCTACGAAGAAAAGGTAGGAAGGAAATGCAAGAGTCAAGCGGTTTTATCTTCAAGTACTTA

mRNA sequence

ATGGAAAATTTTCTTCGATCCGAGGAATATTGGGAGTTGGTAGAACCTGGATATATTGAACCAGTTAGCGGATCGTTGCAAGAGGAAGTCCAACGAAAGAAAAATGATGAAATGAAGCTGAAAGAATTGAAAGTGAACATTTATCTCATGCAAACAATTGATCACATAATTCTGGGCACCATTCTCAAGAAAATACTGCCAAAGAAGTATTGGATGCTACGAAGAAAAGGTAGGAAGGAAATGCAAGAGTCAAGCGGTTTTATCTTCAAGTACTTA

Coding sequence (CDS)

ATGGAAAATTTTCTTCGATCCGAGGAATATTGGGAGTTGGTAGAACCTGGATATATTGAACCAGTTAGCGGATCGTTGCAAGAGGAAGTCCAACGAAAGAAAAATGATGAAATGAAGCTGAAAGAATTGAAAGTGAACATTTATCTCATGCAAACAATTGATCACATAATTCTGGGCACCATTCTCAAGAAAATACTGCCAAAGAAGTATTGGATGCTACGAAGAAAAGGTAGGAAGGAAATGCAAGAGTCAAGCGGTTTTATCTTCAAGTACTTA

Protein sequence

MENFLRSEEYWELVEPGYIEPVSGSLQEEVQRKKNDEMKLKELKVNIYLMQTIDHIILGTILKKILPKKYWMLRRKGRKEMQESSGFIFKYL

Homology

[Close]

BLAST of Bhi10G001803 vs. NCBI nr
Match: RVW85339.1 (hypothetical protein CK203_045529 [Vitis vinifera])

HSP 1 Score: 102.4 bits (254), Expect = 2.1e-18
Identity = 53/84 (63.10%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 1   MENFLRSEEYWELVEPGYIEPVSGSLQEEVQRKKNDEMKLKELKVNIYLMQTIDHIILGT 60
           MENFLRS+E+W LVEPGYIEP   S+Q + QRKKNDEMKLK+LKV  YL Q ID  +L T
Sbjct: 26  MENFLRSKEFWGLVEPGYIEPTIESVQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTVLDT 85

Query: 61  ILKKILPKKYWMLRRKGRKEMQES 85
           ILKK   K  W   +K  KEMQ S
Sbjct: 86  ILKKDTAKDIWDAMKKNSKEMQGS 109

[Close]

BLAST of Bhi10G001803 vs. NCBI nr
Match: KDO37587.1 (hypothetical protein CISIN_1g042894mg [Citrus sinensis])

HSP 1 Score: 102.4 bits (254), Expect = 2.1e-18
Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 1  MENFLRSEEYWELVEPGYIEPVSGSLQEEVQRKKNDEMKLKELKVNIYLMQTIDHIILGT 60
          MENFL+S+E+WELVEPGY+E  SGS+Q + QRKKNDEMK+K+LKV  YL Q ID  +L T
Sbjct: 3  MENFLQSKEFWELVEPGYVESASGSMQTDAQRKKNDEMKMKDLKVKNYLFQAIDCTVLDT 62

Query: 61 ILKKILPKKY 71
          ILK ILPKKY
Sbjct: 63 ILKMILPKKY 72

[Close]

BLAST of Bhi10G001803 vs. NCBI nr
Match: PNX96091.1 (retrotransposon-related protein [Trifolium pratense])

HSP 1 Score: 100.9 bits (250), Expect = 6.0e-18
Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 1   MENFLRSEEYWELVEPGYIEPVSGSLQEEVQRKKNDEMKLKELKVNIYLMQTIDHIILGT 60
           MENFLRS+EYWEL++PG++EP SG+ Q EVQRKKNDEMKLK+LK   YL Q ID  +L T
Sbjct: 26  MENFLRSKEYWELIDPGFVEPASGTTQTEVQRKKNDEMKLKDLKAKNYLFQAIDRTVLNT 85

Query: 61  ILKKILPKKYWMLRRK 77
           ILKK   K+ W   +K
Sbjct: 86  ILKKDTSKEIWDAMKK 101

[Close]

BLAST of Bhi10G001803 vs. NCBI nr
Match: XP_038874244.1 (uncharacterized protein LOC120066979 [Benincasa hispida])

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-17
Identity = 50/76 (65.79%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 1  MENFLRSEEYWELVEPGYIEPVSGSLQEEVQRKKNDEMKLKELKVNIYLMQTIDHIILGT 60
          MENF RS+EYWELVEPGY+EP S  LQ E QRKKNDEMKLK+LKV  YL Q ID  +L T
Sbjct: 3  MENFFRSKEYWELVEPGYVEPASELLQTEAQRKKNDEMKLKDLKVKNYLFQAIDRTVLET 62

Query: 61 ILKKILPKKYWMLRRK 77
          ILKK   K+ W   +K
Sbjct: 63 ILKKNTSKEIWNAMKK 78

[Close]

BLAST of Bhi10G001803 vs. NCBI nr
Match: XP_015877784.1 ((R)-mandelonitrile lyase 1-like [Ziziphus jujuba])

HSP 1 Score: 98.6 bits (244), Expect = 3.0e-17
Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = 0


Query: 1   MENFLRSEEYWELVEPGYIEPVSGSLQEEVQRKKNDEMKLKELKVNIYLMQTIDHIILGT 60
           MENFLRS+EYWELVEPGY+EP++G LQ   Q+KKNDEMKLK+LKV  YL Q ID  +L T
Sbjct: 638 MENFLRSKEYWELVEPGYVEPITGLLQTGAQQKKNDEMKLKDLKVKNYLFQAIDRTVLDT 697

Query: 61  ILKKILPKKYW 72
           IL+K   K+ W
Sbjct: 698 ILEKDTTKEIW 708

[Close]

BLAST of Bhi10G001803 vs. ExPASy TrEMBL
Match: A0A438HLQ7 (CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_045529 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-18
Identity = 53/84 (63.10%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 1   MENFLRSEEYWELVEPGYIEPVSGSLQEEVQRKKNDEMKLKELKVNIYLMQTIDHIILGT 60
           MENFLRS+E+W LVEPGYIEP   S+Q + QRKKNDEMKLK+LKV  YL Q ID  +L T
Sbjct: 26  MENFLRSKEFWGLVEPGYIEPTIESVQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTVLDT 85

Query: 61  ILKKILPKKYWMLRRKGRKEMQES 85
           ILKK   K  W   +K  KEMQ S
Sbjct: 86  ILKKDTAKDIWDAMKKNSKEMQGS 109

[Close]

BLAST of Bhi10G001803 vs. ExPASy TrEMBL
Match: A0A067DEX8 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g042894mg PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-18
Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 1  MENFLRSEEYWELVEPGYIEPVSGSLQEEVQRKKNDEMKLKELKVNIYLMQTIDHIILGT 60
          MENFL+S+E+WELVEPGY+E  SGS+Q + QRKKNDEMK+K+LKV  YL Q ID  +L T
Sbjct: 3  MENFLQSKEFWELVEPGYVESASGSMQTDAQRKKNDEMKMKDLKVKNYLFQAIDCTVLDT 62

Query: 61 ILKKILPKKY 71
          ILK ILPKKY
Sbjct: 63 ILKMILPKKY 72

[Close]

BLAST of Bhi10G001803 vs. ExPASy TrEMBL
Match: A0A2K3MZ63 (Retrotransposon-related protein OS=Trifolium pratense OX=57577 GN=L195_g019292 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.9e-18
Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 1   MENFLRSEEYWELVEPGYIEPVSGSLQEEVQRKKNDEMKLKELKVNIYLMQTIDHIILGT 60
           MENFLRS+EYWEL++PG++EP SG+ Q EVQRKKNDEMKLK+LK   YL Q ID  +L T
Sbjct: 26  MENFLRSKEYWELIDPGFVEPASGTTQTEVQRKKNDEMKLKDLKAKNYLFQAIDRTVLNT 85

Query: 61  ILKKILPKKYWMLRRK 77
           ILKK   K+ W   +K
Sbjct: 86  ILKKDTSKEIWDAMKK 101

[Close]

BLAST of Bhi10G001803 vs. ExPASy TrEMBL
Match: A0A6P3ZHT6 ((R)-mandelonitrile lyase OS=Ziziphus jujuba OX=326968 GN=LOC107414194 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = 0


Query: 1   MENFLRSEEYWELVEPGYIEPVSGSLQEEVQRKKNDEMKLKELKVNIYLMQTIDHIILGT 60
           MENFLRS+EYWELVEPGY+EP++G LQ   Q+KKNDEMKLK+LKV  YL Q ID  +L T
Sbjct: 638 MENFLRSKEYWELVEPGYVEPITGLLQTGAQQKKNDEMKLKDLKVKNYLFQAIDRTVLDT 697

Query: 61  ILKKILPKKYW 72
           IL+K   K+ W
Sbjct: 698 ILEKDTTKEIW 708

[Close]

BLAST of Bhi10G001803 vs. ExPASy TrEMBL
Match: A0A5C7IYY5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002245 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.2e-17
Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 1   MENFLRSEEYWELVEPGYIEPVSGSLQEEVQRKKNDEMKLKELKVNIYLMQTIDHIILGT 60
           MENFLRS+E+W LVEPGYIEP S S+Q + QRKKNDEMKLK+LKV  YL Q ID  +L T
Sbjct: 26  MENFLRSKEFWGLVEPGYIEPASASVQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTVLDT 85

Query: 61  ILKKILPKKYWMLRRK 77
           ILKK   K  W   +K
Sbjct: 86  ILKKDTAKDIWDAMKK 101

The following BLAST results are available for this feature:

BLAST of Bhi10G001803 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi10G001803 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi10G001803 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW85339.1	2.1e-18	63.10	hypothetical protein CK203_045529 [Vitis vinifera]	[more]
KDO37587.1	2.1e-18	70.00	hypothetical protein CISIN_1g042894mg [Citrus sinensis]	[more]
PNX96091.1	6.0e-18	63.16	retrotransposon-related protein [Trifolium pratense]	[more]
XP_038874244.1	1.3e-17	65.79	uncharacterized protein LOC120066979 [Benincasa hispida]	[more]
XP_015877784.1	3.0e-17	66.20	(R)-mandelonitrile lyase 1-like [Ziziphus jujuba]	[more]

BLAST of Bhi10G001803 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438HLQ7	1.0e-18	63.10	CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_045529 P...	[more]
A0A067DEX8	1.0e-18	70.00	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g042894mg PE=4 SV=1	[more]
A0A2K3MZ63	2.9e-18	63.16	Retrotransposon-related protein OS=Trifolium pratense OX=57577 GN=L195_g019292 P...	[more]
A0A6P3ZHT6	1.4e-17	66.20	(R)-mandelonitrile lyase OS=Ziziphus jujuba OX=326968 GN=LOC107414194 PE=3 SV=1	[more]
A0A5C7IYY5	3.2e-17	64.47	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00224...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 26..46
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 1..77
None	No IPR available	PANTHER	PTHR34222:SF47	SUBFAMILY NOT NAMED	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001803	Bhi10M001803	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0046593	mandelonitrile lyase activity
molecular_function	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors