Bhi10G001800 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G001800
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Synechocystis YCF37
Location	chr10: 56682542 .. 56683048 (-)
RNA-Seq Expression	Bhi10G001800
Synteny	Bhi10G001800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTACAGCAATCTCACCTGTCCTTCAAATCCTCCCATCACGATGCCGATTAAACATCACCGTCCGCGCCGCCGCAGTGAAATCGCTGCCAGAATCTCTCTCCGCTAGAAGAACGCGGCGACAGACACTGTTGTTCCTGACGGCAACGGCGGCGGCGGCGGCGGTTGTGGGTAGAGAGAATCCGTCAGTGGCGGAGGACATTCCTCTGTTCGGTCTGAGGAAGAAGCTCAAGAAGGTGGAGGAGGAGGCGGAGGAGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGACTGGAGACGGCGGAGCGAGGGATTGTGACGGCGGAGCAGGGGATTGTAGCGGCAGAGAGAGGAATTGAAACGGCGGAGAAAGAAATTGAAACGGCAGTGAATTTCGGAGCGTTATCGCAGGCTGGGGCGGTCGCCGGAGCTGAGGTCGTTGGAGTTCTCGTTGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAA

mRNA sequence

ATGGCTTCTACAGCAATCTCACCTGTCCTTCAAATCCTCCCATCACGATGCCGATTAAACATCACCGTCCGCGCCGCCGCAGTGAAATCGCTGCCAGAATCTCTCTCCGCTAGAAGAACGCGGCGACAGACACTGTTGTTCCTGACGGCAACGGCGGCGGCGGCGGCGGTTGTGGGTAGAGAGAATCCGTCAGTGGCGGAGGACATTCCTCTGTTCGGTCTGAGGAAGAAGCTCAAGAAGGTGGAGGAGGAGGCGGAGGAGATCGCTGGGGCGGTCGCCGGAGCTGAGGTCGTTGGAGTTCTCGTTGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAA

Coding sequence (CDS)

ATGGCTTCTACAGCAATCTCACCTGTCCTTCAAATCCTCCCATCACGATGCCGATTAAACATCACCGTCCGCGCCGCCGCAGTGAAATCGCTGCCAGAATCTCTCTCCGCTAGAAGAACGCGGCGACAGACACTGTTGTTCCTGACGGCAACGGCGGCGGCGGCGGCGGTTGTGGGTAGAGAGAATCCGTCAGTGGCGGAGGACATTCCTCTGTTCGGTCTGAGGAAGAAGCTCAAGAAGGTGGAGGAGGAGGCGGAGGAGATCGCTGGGGCGGTCGCCGGAGCTGAGGTCGTTGGAGTTCTCGTTGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAA

Protein sequence

MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGRENPSVAEDIPLFGLRKKLKKVEEEAEEIAGAVAGAEVVGVLVATSIVNGILGPEGQS

Homology

[Close]

BLAST of Bhi10G001800 vs. TAIR 10
Match: AT2G23670.1 (homolog of Synechocystis YCF37 )

HSP 1 Score: 68.2 bits (165), Expect = 5.1e-12
Identity = 65/167 (38.92%), Postives = 78/167 (46.71%), Query Frame = 0


Query: 1   MASTAISPVLQ----ILPSRC--RLNITVRAA-AVKSLPESLSARRTRRQTLLFLTATAA 60
           MAST    +L      L +RC    +++ RAA + K    S S     R+ LLF  +  A
Sbjct: 1   MASTVSLSLLSGGSGALQARCARTAHVSPRAAHSNKPALSSFSLTGASRRNLLF--SLTA 60

Query: 61  AAAVVGRENPSVAEDIPLFGLRKKLKKVEEEAEEI------------------------- 117
           A  V G +  S+AE+IPLFG+RKKLKK EEEA EI                         
Sbjct: 61  ATVVTGLQPASMAENIPLFGIRKKLKKAEEEAVEIVKEGFETAEKGVDAAEKGLEAAERG 120

[Close]

BLAST of Bhi10G001800 vs. NCBI nr
Match: XP_038900735.1 (uncharacterized protein LOC120087852 [Benincasa hispida])

HSP 1 Score: 185.3 bits (469), Expect = 3.1e-43
Identity = 117/168 (69.64%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 1   MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
           MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR
Sbjct: 1   MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60

Query: 61  ENPSVAEDIPLFGLRKKLKKVEEEAEEI-------------------------------- 118
           ENPSVAEDIPLFGLRKKLKKVEEEAEEI                                
Sbjct: 61  ENPSVAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERG 120

[Close]

BLAST of Bhi10G001800 vs. NCBI nr
Match: XP_004148045.1 (uncharacterized protein LOC101208092 [Cucumis sativus] >KGN62038.1 hypothetical protein Csa_006379 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-34
Identity = 105/168 (62.50%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 1   MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
           MASTAISP LQIL  RCRL+ TVRAAAVKS  ESLSA RTRRQTLLFLTAT A AAVVGR
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESLSASRTRRQTLLFLTAT-ATAAVVGR 60

Query: 61  ENPSVAEDIPLFGLRKKLKKVEEEAEEI-------------------------------- 118
           ENPS+AEDIPLFGLRKKLKKVEEEAEEI                                
Sbjct: 61  ENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAERE 120

[Close]

BLAST of Bhi10G001800 vs. NCBI nr
Match: XP_022971729.1 (uncharacterized protein LOC111470397 [Cucurbita maxima])

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33
Identity = 104/168 (61.90%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 1   MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
           MAST ISP+LQIL  RCRLNITVRAA+VK  PESLSA RTRRQTLL LTAT A AAVVGR
Sbjct: 1   MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTAT-ATAAVVGR 60

Query: 61  ENPSVAEDIPLFGLRKKLKKVEEEAEEI-------------------------------- 118
           ENPS+AE+IPLFGLRKKLKKVEEEAEEI                                
Sbjct: 61  ENPSMAENIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERG 120

[Close]

BLAST of Bhi10G001800 vs. NCBI nr
Match: XP_008457854.1 (PREDICTED: uncharacterized protein LOC103497439 [Cucumis melo] >KAA0045850.1 Synechocystis YCF37 [Cucumis melo var. makuwa] >TYK13738.1 Synechocystis YCF37 [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33
Identity = 103/168 (61.31%), Postives = 106/168 (63.10%), Query Frame = 0


Query: 1   MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
           MASTAISP LQIL  RCRL+ TVRAAAVK   ESLSA RTRRQTLLFLTAT   AAVVGR
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKPPSESLSASRTRRQTLLFLTAT---AAVVGR 60

Query: 61  ENPSVAEDIPLFGLRKKLKKVEEEAEEI-------------------------------- 118
           ENPS+AEDIPLFGLRKKLKKVEEEAEEI                                
Sbjct: 61  ENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAERE 120

[Close]

BLAST of Bhi10G001800 vs. NCBI nr
Match: XP_022928047.1 (uncharacterized protein LOC111434949 [Cucurbita moschata] >XP_023512058.1 uncharacterized protein LOC111776892 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.0 bits (380), Expect = 6.4e-33
Identity = 103/167 (61.68%), Postives = 106/167 (63.47%), Query Frame = 0


Query: 1   MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
           MAST ISP+LQIL  RCRLNITVRAA+VK  PESLSA RTRRQTLL LTAT A AAVVGR
Sbjct: 1   MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTAT-ATAAVVGR 60

Query: 61  ENPSVAEDIPLFGLRKKLKKVEEEAEEI-------------------------------- 117
           ENPS+AEDIPLFGLRKKLKKVEEEAEEI                                
Sbjct: 61  ENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERG 120

[Close]

BLAST of Bhi10G001800 vs. ExPASy TrEMBL
Match: A0A0A0LJU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292190 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.7e-35
Identity = 105/168 (62.50%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 1   MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
           MASTAISP LQIL  RCRL+ TVRAAAVKS  ESLSA RTRRQTLLFLTAT A AAVVGR
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESLSASRTRRQTLLFLTAT-ATAAVVGR 60

Query: 61  ENPSVAEDIPLFGLRKKLKKVEEEAEEI-------------------------------- 118
           ENPS+AEDIPLFGLRKKLKKVEEEAEEI                                
Sbjct: 61  ENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAERE 120

[Close]

BLAST of Bhi10G001800 vs. ExPASy TrEMBL
Match: A0A5D3CRC5 (Synechocystis YCF37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002670 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.2e-34
Identity = 103/168 (61.31%), Postives = 106/168 (63.10%), Query Frame = 0


Query: 1   MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
           MASTAISP LQIL  RCRL+ TVRAAAVK   ESLSA RTRRQTLLFLTAT   AAVVGR
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKPPSESLSASRTRRQTLLFLTAT---AAVVGR 60

Query: 61  ENPSVAEDIPLFGLRKKLKKVEEEAEEI-------------------------------- 118
           ENPS+AEDIPLFGLRKKLKKVEEEAEEI                                
Sbjct: 61  ENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAERE 120

[Close]

BLAST of Bhi10G001800 vs. ExPASy TrEMBL
Match: A0A6J1I9D9 (uncharacterized protein LOC111470397 OS=Cucurbita maxima OX=3661 GN=LOC111470397 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.2e-34
Identity = 104/168 (61.90%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 1   MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
           MAST ISP+LQIL  RCRLNITVRAA+VK  PESLSA RTRRQTLL LTAT A AAVVGR
Sbjct: 1   MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTAT-ATAAVVGR 60

Query: 61  ENPSVAEDIPLFGLRKKLKKVEEEAEEI-------------------------------- 118
           ENPS+AE+IPLFGLRKKLKKVEEEAEEI                                
Sbjct: 61  ENPSMAENIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERG 120

[Close]

BLAST of Bhi10G001800 vs. ExPASy TrEMBL
Match: A0A1S3C6G5 (uncharacterized protein LOC103497439 OS=Cucumis melo OX=3656 GN=LOC103497439 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.2e-34
Identity = 103/168 (61.31%), Postives = 106/168 (63.10%), Query Frame = 0


Query: 1   MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
           MASTAISP LQIL  RCRL+ TVRAAAVK   ESLSA RTRRQTLLFLTAT   AAVVGR
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKPPSESLSASRTRRQTLLFLTAT---AAVVGR 60

Query: 61  ENPSVAEDIPLFGLRKKLKKVEEEAEEI-------------------------------- 118
           ENPS+AEDIPLFGLRKKLKKVEEEAEEI                                
Sbjct: 61  ENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAERE 120

[Close]

BLAST of Bhi10G001800 vs. ExPASy TrEMBL
Match: A0A6J1EIT8 (uncharacterized protein LOC111434949 OS=Cucurbita moschata OX=3662 GN=LOC111434949 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.1e-33
Identity = 103/167 (61.68%), Postives = 106/167 (63.47%), Query Frame = 0


Query: 1   MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
           MAST ISP+LQIL  RCRLNITVRAA+VK  PESLSA RTRRQTLL LTAT A AAVVGR
Sbjct: 1   MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTAT-ATAAVVGR 60

Query: 61  ENPSVAEDIPLFGLRKKLKKVEEEAEEI-------------------------------- 117
           ENPS+AEDIPLFGLRKKLKKVEEEAEEI                                
Sbjct: 61  ENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERG 120

The following BLAST results are available for this feature:

BLAST of Bhi10G001800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23670.1	5.1e-12	38.92	homolog of Synechocystis YCF37	[more]

BLAST of Bhi10G001800 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi10G001800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900735.1	3.1e-43	69.64	uncharacterized protein LOC120087852 [Benincasa hispida]	[more]
XP_004148045.1	1.2e-34	62.50	uncharacterized protein LOC101208092 [Cucumis sativus] >KGN62038.1 hypothetical ...	[more]
XP_022971729.1	1.7e-33	61.90	uncharacterized protein LOC111470397 [Cucurbita maxima]	[more]
XP_008457854.1	1.7e-33	61.31	PREDICTED: uncharacterized protein LOC103497439 [Cucumis melo] >KAA0045850.1 Syn...	[more]
XP_022928047.1	6.4e-33	61.68	uncharacterized protein LOC111434949 [Cucurbita moschata] >XP_023512058.1 unchar...	[more]

BLAST of Bhi10G001800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJU7	5.7e-35	62.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292190 PE=4 SV=1	[more]
A0A5D3CRC5	8.2e-34	61.31	Synechocystis YCF37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G...	[more]
A0A6J1I9D9	8.2e-34	61.90	uncharacterized protein LOC111470397 OS=Cucurbita maxima OX=3661 GN=LOC111470397...	[more]
A0A1S3C6G5	8.2e-34	61.31	uncharacterized protein LOC103497439 OS=Cucumis melo OX=3656 GN=LOC103497439 PE=...	[more]
A0A6J1EIT8	3.1e-33	61.68	uncharacterized protein LOC111434949 OS=Cucurbita moschata OX=3662 GN=LOC1114349...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36734	YCF37-LIKE PROTEIN	coord: 1..88 coord: 89..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001800	Bhi10M001800	mRNA