Bhi10G001784 (gene) Wax gourd (B227) v1

Overview
NameBhi10G001784
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr10: 56193751 .. 56194391 (-)
RNA-Seq ExpressionBhi10G001784
SyntenyBhi10G001784
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGAAGCGGGCAAGGAGGGCGAAGGGAGCCGAGGGAGAGGGAGGGGGAGAAGGAAGGTGGGGAGAGGGACTGGGGAGGGACAAAAACAGGAAAGTGGGGCAAGGAAGCAAGAGGGGAGCTGAAGCGAAAAGAACGAAGGGGGGCGTCAGCCAGGCCAGGAAAGACGGGGAGGGAGTGCGCCGGCCCAGCCCAAAGAAGGAAGGCGTTGGGGTAGCACGAACAAGGGTGGGAAGACGCGGGCCGCGCGGAAGAGGGGGAGAAGCGGGCGGGGGGGGCGCAAAGGGAACCAAAAAGGGGGAAGAGGTCCGAAAAGCAGGAACGGGTGGGAGGGTAGGAGGGCGAAGAAGAAAGGAAAGCCAGGGGAAAGGAAGAAAGGGGGAGGGAGGCCCCGAGGCCCGGGGCGGCGAGAAGGGAACGAAATGGGGCTGGGAGAAAGAAAAGAGAGGAAAGGGAAAGAGCAGGGGAGAAAGAACGAGACGGGGAGCGCAAGGCGGAGGGGGCCAAGAGGAAGGAAGAGAGGAGGATAGAAACGGGGGCATCCGGGGCGAGAAGGAGAAGCGGGGAGAAGGGGGCGGGCGGGTGCGGCGGAGAAGAAGGGCAGGGGAGCAAGGAAGGGGAAAAGGGCAGGGGAAATGA

mRNA sequence

ATGGGAGGAAGCGGGCAAGGAGGGCGAAGGGAGCCGAGGGAGAGGGAGGGGGAGAAGGAAGGTGGGGAGAGGGACTGGGGAGGGACAAAAACAGGAAAGTGGGGCAAGGAAGCAAGAGGGGAGCTGAAGCGAAAAGAACGAAGGGGGGCGTCAGCCAGGCCAGGAAAGACGGGGAGGGAGTGCGCCGGCCCAGCCCAAAGAAGGAAGGCGTTGGGAGGGGGAGAAGCGGGCGGGGGGGGCGCAAAGGGAACCAAAAAGGGGGAAGAGGTCCGAAAAGCAGGAACGGGTGGGAGGGTAGGAGGGCGAAGAAGAAAGGAAAGCCAGGGGAAAGGAAGAAAGGGGGAGGGAGGCCCCGAGGCCCGGGGCGGCGAGAAGGGAACGAAATGGGGCTGGGAGAAAGAAAAGAGAGGAAAGGGAAAGAGCAGGGGAGAAAGAACGAGACGGGGAGCGCAAGGCGGAGGGGGCCAAGAGGAAGGAAGAGAGGAGGATAGAAACGGGGGCATCCGGGGCGAGAAGGAGAAGCGGGGAGAAGGGGGCGGGCGGGTGCGGCGGAGAAGAAGGGCAGGGGAGCAAGGAAGGGGAAAAGGGCAGGGGAAATGA

Coding sequence (CDS)

ATGGGAGGAAGCGGGCAAGGAGGGCGAAGGGAGCCGAGGGAGAGGGAGGGGGAGAAGGAAGGTGGGGAGAGGGACTGGGGAGGGACAAAAACAGGAAAGTGGGGCAAGGAAGCAAGAGGGGAGCTGAAGCGAAAAGAACGAAGGGGGGCGTCAGCCAGGCCAGGAAAGACGGGGAGGGAGTGCGCCGGCCCAGCCCAAAGAAGGAAGGCGTTGGGAGGGGGAGAAGCGGGCGGGGGGGGCGCAAAGGGAACCAAAAAGGGGGAAGAGGTCCGAAAAGCAGGAACGGGTGGGAGGGTAGGAGGGCGAAGAAGAAAGGAAAGCCAGGGGAAAGGAAGAAAGGGGGAGGGAGGCCCCGAGGCCCGGGGCGGCGAGAAGGGAACGAAATGGGGCTGGGAGAAAGAAAAGAGAGGAAAGGGAAAGAGCAGGGGAGAAAGAACGAGACGGGGAGCGCAAGGCGGAGGGGGCCAAGAGGAAGGAAGAGAGGAGGATAGAAACGGGGGCATCCGGGGCGAGAAGGAGAAGCGGGGAGAAGGGGGCGGGCGGGTGCGGCGGAGAAGAAGGGCAGGGGAGCAAGGAAGGGGAAAAGGGCAGGGGAAATGA

Protein sequence

MGGSGQGGRREPREREGEKEGGERDWGGTKTGKWGKEARGELKRKERRGASARPGKTGRECAGPAQRRKALGGGEAGGGGAKGTKKGEEVRKAGTGGRVGGRRRKESQGKGRKGEGGPEARGGEKGTKWGWEKEKRGKGKSRGERTRRGAQGGGGQEEGREEDRNGGIRGEKEKRGEGGGRVRRRRRAGEQGRGKGQGK
Homology
[Close]
BLAST of Bhi10G001784 vs. NCBI nr
Match: CAD7679951.1 (unnamed protein product [Nyctereutes procyonoides])

HSP 1 Score: 55.5 bits (132), Expect = 6.3e-04
Identity = 81/196 (41.33%), Postives = 103/196 (52.55%), Query Frame = 0 

Query: 2   GGSGQGGRREPREREGEKEGGE-RDWGGTKTGKWGKEARGELKRKERRGASARPGKTGRE 61
           GG G+GG  E R R GE  GGE +  GG   G+ GKE RGE +R+ +RG   R GK    
Sbjct: 94  GGEGRGGEGEGRGRGGEGRGGEGKGRGGEGKGRGGKERRGEERREGKRGEERREGK---- 153

Query: 62  CAGPAQRRKALGGGEAGGGGAKGTKKGEEVRKAGTGGRVGGRRRKESQGKGRKGEGGPEA 121
                      GGGE  GG  +   +GEE R+   GG   GR  K  +GKGR+G+G    
Sbjct: 154 -----------GGGERRGGKGREEGRGEEGREGRRGGEGKGREGKGREGKGREGKG---- 213

Query: 122 RGGEKGTKWGWEKEKRGKGKSRGERTRRGAQGGGGQEEGREEDRNGGIRGEKEKRGEGGG 181
           R G +G +   E E+RG+GK R  + R G   GGG  EGRE  R G     +E +G GG 
Sbjct: 214 REGREGREGRGEGERRGEGKGREGKGREGKGRGGG--EGRE--RKGREGKGREGKGRGGE 266

Query: 182 RVRRRRRAGEQGRGKG 197
             R   R GE+G+G+G
Sbjct: 274 ERRGEERRGEEGKGRG 266

The following BLAST results are available for this feature:
BLAST of Bhi10G001784 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi10G001784 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi10G001784 vs. NCBI nr
Match NameE-valueIdentityDescription
CAD7679951.16.3e-0441.33unnamed protein product [Nyctereutes procyonoides][more]
BLAST of Bhi10G001784 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M001784Bhi10M001784mRNA