Bhi10G001674 (gene) Wax gourd (B227) v1

Overview
NameBhi10G001674
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr10: 51598092 .. 51598331 (-)
RNA-Seq ExpressionBhi10G001674
SyntenyBhi10G001674
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGGGCACGTAGACCTCTGGACTTCCGAGCAGGACAAACTCCTCCGCGAAGGTGGCTCCTCCCCCACCGCTGCCACCGCCGTTGACGGCCCGGTTCGAGCTGCTGTGGCTGAAGAAAGAAGATGGAACTTCACTGAGTTAACTCGGGCTTGGGACCAAGTCAAGCGACTCCGTCCCTATGGGAAGATGTGTTCTGAAGCTTCTGTTTCTATGTTGGTTGAATATATGAGCCCATAG

mRNA sequence

ATGTCGGGGCACGTAGACCTCTGGACTTCCGAGCAGGACAAACTCCTCCGCGAAGGTGGCTCCTCCCCCACCGCTGCCACCGCCGTTGACGGCCCGGTTCGAGCTGCTGTGGCTGAAGAAAGAAGATGGAACTTCACTGAGTTAACTCGGGCTTGGGACCAAGTCAAGCGACTCCGTCCCTATGGGAAGATGTGTTCTGAAGCTTCTGTTTCTATGTTGGTTGAATATATGAGCCCATAG

Coding sequence (CDS)

ATGTCGGGGCACGTAGACCTCTGGACTTCCGAGCAGGACAAACTCCTCCGCGAAGGTGGCTCCTCCCCCACCGCTGCCACCGCCGTTGACGGCCCGGTTCGAGCTGCTGTGGCTGAAGAAAGAAGATGGAACTTCACTGAGTTAACTCGGGCTTGGGACCAAGTCAAGCGACTCCGTCCCTATGGGAAGATGTGTTCTGAAGCTTCTGTTTCTATGTTGGTTGAATATATGAGCCCATAG

Protein sequence

MSGHVDLWTSEQDKLLREGGSSPTAATAVDGPVRAAVAEERRWNFTELTRAWDQVKRLRPYGKMCSEASVSMLVEYMSP
Homology
BLAST of Bhi10G001674 vs. NCBI nr
Match: KAA0045984.1 (hypothetical protein E6C27_scaffold243G005370 [Cucumis melo var. makuwa] >TYK13600.1 hypothetical protein E5676_scaffold299G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 117.9 bits (294), Expect = 4.1e-23
Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0

Query: 1  MSGHVDLWTSEQDKLLREGGSSPTAATAVDGPVRAAVAEERRWNFTELTRAWDQVKRLRP 60
          MSG +DLWTSEQ KL  EGGSSP A T VDGPVR  VAEE RWNFTELTR WD+V++L  
Sbjct: 1  MSGLIDLWTSEQAKLRGEGGSSPAAPT-VDGPVRVDVAEEGRWNFTELTRVWDRVRQLGM 60

Query: 61 YGKMCSEASVSMLVEYMSP 80
           GKMCSEASVS+LVEYMSP
Sbjct: 61 NGKMCSEASVSILVEYMSP 78

BLAST of Bhi10G001674 vs. NCBI nr
Match: KAE8651862.1 (hypothetical protein Csa_006004, partial [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 6.7e-18
Identity = 55/79 (69.62%), Postives = 59/79 (74.68%), Query Frame = 0

Query: 1  MSGHVDLWTSEQDKLLREGGSSPTAATAVDGPVRAAVAEERRWNFTELTRAWDQVKRLRP 60
          MSG VDLWTSEQ KL  EGGSSP A T VD      VAE+ RWN TELTR WD+V+RL  
Sbjct: 7  MSGLVDLWTSEQAKLRHEGGSSPAAPT-VD------VAEQGRWNSTELTRVWDRVRRLGM 66

Query: 61 YGKMCSEASVSMLVEYMSP 80
           GKMCSEASV MLVE+MSP
Sbjct: 67 NGKMCSEASVCMLVEFMSP 78

BLAST of Bhi10G001674 vs. ExPASy TrEMBL
Match: A0A5D3CQ79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00970 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.0e-23
Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0

Query: 1  MSGHVDLWTSEQDKLLREGGSSPTAATAVDGPVRAAVAEERRWNFTELTRAWDQVKRLRP 60
          MSG +DLWTSEQ KL  EGGSSP A T VDGPVR  VAEE RWNFTELTR WD+V++L  
Sbjct: 1  MSGLIDLWTSEQAKLRGEGGSSPAAPT-VDGPVRVDVAEEGRWNFTELTRVWDRVRQLGM 60

Query: 61 YGKMCSEASVSMLVEYMSP 80
           GKMCSEASVS+LVEYMSP
Sbjct: 61 NGKMCSEASVSILVEYMSP 78

BLAST of Bhi10G001674 vs. ExPASy TrEMBL
Match: A0A0A0LIK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237730 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.3e-18
Identity = 55/79 (69.62%), Postives = 59/79 (74.68%), Query Frame = 0

Query: 1  MSGHVDLWTSEQDKLLREGGSSPTAATAVDGPVRAAVAEERRWNFTELTRAWDQVKRLRP 60
          MSG VDLWTSEQ KL  EGGSSP A T VD      VAE+ RWN TELTR WD+V+RL  
Sbjct: 1  MSGLVDLWTSEQAKLRHEGGSSPAAPT-VD------VAEQGRWNSTELTRVWDRVRRLGM 60

Query: 61 YGKMCSEASVSMLVEYMSP 80
           GKMCSEASV MLVE+MSP
Sbjct: 61 NGKMCSEASVCMLVEFMSP 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0045984.14.1e-2375.95hypothetical protein E6C27_scaffold243G005370 [Cucumis melo var. makuwa] >TYK136... [more]
KAE8651862.16.7e-1869.62hypothetical protein Csa_006004, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A5D3CQ792.0e-2375.95Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LIK63.3e-1869.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237730 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M001674Bhi10M001674mRNA