Bhi10G001402 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G001402
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Ribosome hibernation promotion factor
Location	chr10: 44623854 .. 44626627 (+)
RNA-Seq Expression	Bhi10G001402
Synteny	Bhi10G001402

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAAAAAGACTATTTAGACATTGGGTTGGCGCATAAAGGCTGGCTTACTTTATCCACTTGTTTCCCTTTTCCTTTATCCATCCGCTATTTCCTCTATCAATTCCAAGTTTTCAACTCAACAATGGCCGCTCTCACCTCTTCCATGCACACCAGTCTCCTTCCCGATCACTCATTATCTTCTTCTTCTTCTTCTTCTTCTTCTACGATCTCTTTCTTTCCCGCTTCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTGTTCTTCCACTGCTTCTGCGTTCTTCAACTCCTGCAAGAGCTTCCGAACCTTTGAGACTGCATCCCGCAACCGTCATGCCTCAAACTCTTTCAATGTTCGGATGTCCTGGGACGGCCCCCTCTCCTCTGTCAAATTAATTGTCCAAGCCAAAAATTTGGAGGTATTTCATTTAGCTTCAACTTTGCTCGCAATGCAAATTCTTATTTCTTTTGTGTGTTCCACAAAACCCATATCCCCTTCTCTCAAACCCTACCCTTGTATTTGTCAACTTCACCATTTCCACTAAATTTAGTTTACAAACCCTAATTTTATTTTCTGCCTCATTTCTTCGAATATCTTCCATATCAACATTCGTGTCCCCTAGAATTTACCTACTAAAACTCATAAACAAGCTTCCTTAGTGGTAGAAACTCTGTTGCTGCTAAATGACAAGACCACCTACTAACTAGCAAAATCTAACATCTGTTTCTAGAAATTACCAGTATCGTATCTCCATGTTTGAATTGTCAAACCTTACGTGGATTTATTTTTTAATTGTGCAAAAAACTAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCCAAGGATTAGAAGATGCGAGGTATTCTATTTGCTTCTTTGTTTAAAATTTATCCATATGAATTGAACCCTCATTCTTTTCCGTGAACACTGTGTTTATATAGGTTACATTATTCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTATGCAAGCATTGATTTGGTTTCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCGTGGCCGACACATGAAAGGATTTGACAGATCGAAAGTAAGAGAACCTGCACCAATAGTAGTTGAGGATGAGGACGAGGAAGTTTTTGAAGAAGATGGTGAAGTTATTGATGAGGTTATTCCTTCACCCTTTGGGTTTTTTGCTTTGACTTCATTTCACTGGTATATGTTAATCATTTACGATGATATTAGCTTATAAAGACTCATGTATGCCATGCCTATTAATTATTTTTTACATGTCAAGCTTATTATGAGTGTCAGAATTACTAAACCACAACTTTTCTCACTTAGTTCTTGAAATCGTTGTTCTCTATAAAGGAAAAAAAAACATCAATTTCGTAGTTAATTTTCATGCTCGTTTCCATTGATTGGTATTGGGAAAATTCTAGATGCAGTACTCAGATCAATTTCGGCCCAAACTCGTTGTATTTCTATTTACATTATAGGATTAGTCAGTCAGTTCTTTTATTTCACAACATGATATTTTAGGTGAAGATGAACATGAAAACATCGGAAGTTGGACCTGGCTGTAAGATGGAGGGCTAACATTGTGTTCGACTGTTATTTTATTGATCCTTTGCTCTTAATGAGTGTTTTGTGGTCCATTCCAATACATGTACTTGATATTGATCCTTGTTCATATAGCTTTTGATTCCCTCGCTTATTTTGTTGACATTCAATTTTGATTGTTGTTGAAATTCAATGTTGGTATCTAATTACTCACTTTTATCTTGATTTCAGATTGTTCGGAGAAAATACTTCGATATGCCACCTTTGACAATTGAAGAAGCAATCGAACAACTTAAAAATATTGACCATGATTTCTACGGTTTCCGGAATGAAGAAACTGGTGCGTTGATTTGAGTATAATGATAATCTTGTTTTGTTGGGATTCTGTGTTGTTTATATAGTAGTTTATTGTCTTCATTCTTGGCCCAGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCAGAGCTGAGAAATTAGAATCTGTGACGATAGATGCAGCCAGAGAACCATCCTTGGCCGAATGATTGGACTTCAGGGGGAAGTTTCATGTTCAAGATATCTTACCACTCTTACATTCGTGTAAAACTGCAAAACTTCGACTGTAACATGCATCTGAAGACCTCTCTTGCAGAGAGTATATAGATTTAGATTCGAGGTTCTTTGGTGATGAAGACAATTTTGGAATAAGAAATGAGTAAAAAGTAAAATGAGATGCAGAATATTCTAATGAATGAATGATCAGCTTGCAGGGGTGTTACCATGCAAATATACTATTTTCTTTTGTAATCACGATTTGTTTTCCCTCACCATGGCCAGTTAATTGTTGGTTCTTGAATCGTGGTTCATTTTTCTTCCTTAAAGAACGCCCTCGATTGCCACATTCGTACTCTAATCATATGCGACATGATATTGATCATATAAACAGCCCCACTGGAATGACTATTGATCATCAAGTGAACGTCAAATGTTAGTTCTTTCAGATATTGGGACTCTAATTGAATGAACTCTATCAAGCCAAGTCGAGCTGCCAAAACAGTATCCGGTTGCCAC

mRNA sequence

CTGAAAAAGACTATTTAGACATTGGGTTGGCGCATAAAGGCTGGCTTACTTTATCCACTTGTTTCCCTTTTCCTTTATCCATCCGCTATTTCCTCTATCAATTCCAAGTTTTCAACTCAACAATGGCCGCTCTCACCTCTTCCATGCACACCAGTCTCCTTCCCGATCACTCATTATCTTCTTCTTCTTCTTCTTCTTCTTCTACGATCTCTTTCTTTCCCGCTTCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTGTTCTTCCACTGCTTCTGCGTTCTTCAACTCCTGCAAGAGCTTCCGAACCTTTGAGACTGCATCCCGCAACCGTCATGCCTCAAACTCTTTCAATGTTCGGATGTCCTGGGACGGCCCCCTCTCCTCTGTCAAATTAATTGTCCAAGCCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCCAAGGATTAGAAGATGCGAGGTTACATTATTCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTATGCAAGCATTGATTTGGTTTCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCGTGGCCGACACATGAAAGGATTTGACAGATCGAAAGTAAGAGAACCTGCACCAATAGTAGTTGAGGATGAGGACGAGGAAGTTTTTGAAGAAGATGGTGAAGTTATTGATGAGATTGTTCGGAGAAAATACTTCGATATGCCACCTTTGACAATTGAAGAAGCAATCGAACAACTTAAAAATATTGACCATGATTTCTACGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCAGAGCTGAGAAATTAGAATCTGTGACGATAGATGCAGCCAGAGAACCATCCTTGGCCGAATGATTGGACTTCAGGGGGAAGTTTCATGTTCAAGATATCTTACCACTCTTACATTCGTGTAAAACTGCAAAACTTCGACTGTAACATGCATCTGAAGACCTCTCTTGCAGAGAGTATATAGATTTAGATTCGAGGTTCTTTGGTGATGAAGACAATTTTGGAATAAGAAATGAGTAAAAAGTAAAATGAGATGCAGAATATTCTAATGAATGAATGATCAGCTTGCAGGGGTGTTACCATGCAAATATACTATTTTCTTTTGTAATCACGATTTGTTTTCCCTCACCATGGCCAGTTAATTGTTGGTTCTTGAATCGTGGTTCATTTTTCTTCCTTAAAGAACGCCCTCGATTGCCACATTCGTACTCTAATCATATGCGACATGATATTGATCATATAAACAGCCCCACTGGAATGACTATTGATCATCAAGTGAACGTCAAATGTTAGTTCTTTCAGATATTGGGACTCTAATTGAATGAACTCTATCAAGCCAAGTCGAGCTGCCAAAACAGTATCCGGTTGCCAC

Coding sequence (CDS)

ATGGCCGCTCTCACCTCTTCCATGCACACCAGTCTCCTTCCCGATCACTCATTATCTTCTTCTTCTTCTTCTTCTTCTTCTACGATCTCTTTCTTTCCCGCTTCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTGTTCTTCCACTGCTTCTGCGTTCTTCAACTCCTGCAAGAGCTTCCGAACCTTTGAGACTGCATCCCGCAACCGTCATGCCTCAAACTCTTTCAATGTTCGGATGTCCTGGGACGGCCCCCTCTCCTCTGTCAAATTAATTGTCCAAGCCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCCAAGGATTAGAAGATGCGAGGTTACATTATTCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTATGCAAGCATTGATTTGGTTTCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCGTGGCCGACACATGAAAGGATTTGACAGATCGAAAGTAAGAGAACCTGCACCAATAGTAGTTGAGGATGAGGACGAGGAAGTTTTTGAAGAAGATGGTGAAGTTATTGATGAGATTGTTCGGAGAAAATACTTCGATATGCCACCTTTGACAATTGAAGAAGCAATCGAACAACTTAAAAATATTGACCATGATTTCTACGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCAGAGCTGAGAAATTAGAATCTGTGACGATAGATGCAGCCAGAGAACCATCCTTGGCCGAATGA

Protein sequence

MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSLHFSALKVHALSCSSTASAFFNSCKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEEDGEVIDEIVRRKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLESVTIDAAREPSLAE

Homology

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BLAST of Bhi10G001402 vs. TAIR 10
Match: AT5G24490.1 (30S ribosomal protein, putative )

HSP 1 Score: 345.9 bits (886), Expect = 3.4e-95
Identity = 180/250 (72.00%), Postives = 211/250 (84.40%), Query Frame = 0


Query: 72  RNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKVGKAVQKHSHLVREVD 131
           R+ +  +S  V+MSWDGPL+SVKLI+Q KNLEL+E +K+HVEEKVGK+VQKHSHLVREVD
Sbjct: 61  RHSYCRSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVD 120

Query: 132 VRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKE 191
           VRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYA IDLVS+IIQRKLRKIKE
Sbjct: 121 VRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKE 180

Query: 192 KDSDRGRHMKGFDRSKVREPA--PIVVEDED-------EEVFEEDGEVIDEIVRRKYFDM 251
           KDSD GRHMKGF+R KVREP   P+V + ED       EE  EE+ ++I EIVR K F+M
Sbjct: 181 KDSDHGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEE--EEEDDLIKEIVRTKTFEM 240

Query: 252 PPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLESVTI 311
           PPLT+ EA+EQL+ + HDFYGF+NEETGEINI+YKRK+GGYGLIIPK++G+AEK+E +  
Sbjct: 241 PPLTVAEAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPT 300

Query: 312 DAAREPSLAE 313
           +   E S AE
Sbjct: 301 EQLNEHSFAE 308

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BLAST of Bhi10G001402 vs. ExPASy Swiss-Prot
Match: P19954 (Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP1 PE=1 SV=2)

HSP 1 Score: 332.0 bits (850), Expect = 7.1e-90
Identity = 175/271 (64.58%), Postives = 212/271 (78.23%), Query Frame = 0


Query: 51  SSTASAFFNSCKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKK 110
           SS  S F NSC         S     +    V MSWDGPLSSVKLI+Q +NLE+++ V+ 
Sbjct: 33  SSLRSTFTNSCSLGLNVAVKSVQISRNKPNVVCMSWDGPLSSVKLILQGRNLEVSDNVRS 92

Query: 111 HVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAET 170
           HVE+KVGK+V KHSHLVREVDVRLS RGG+  KGP++RRCEVTLFTK+HGV+RAEEDAE+
Sbjct: 93  HVEDKVGKSVAKHSHLVREVDVRLSARGGDLSKGPKLRRCEVTLFTKRHGVIRAEEDAES 152

Query: 171 VYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDED--EEVFE--- 230
           +Y+SIDLVSSIIQRKLRKIK+K SD GRHMKGF+RSKVR+P P+ +  E+  EEV     
Sbjct: 153 LYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVRDPEPVRITREEVLEEVESAPA 212

Query: 231 ----EDGEVIDEIVRRKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDG 290
               ED + I+E+VR KYFDMPPLTI EA+EQL+N+DHDFY FRNEETG+INILYKRK+G
Sbjct: 213 PVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDINILYKRKEG 272

Query: 291 GYGLIIPKENGRAEKLESVTIDAAREPSLAE 313
           GYGLIIPK+ G+ EKLES+ +   ++PS AE
Sbjct: 273 GYGLIIPKD-GKTEKLESLPVQTDKQPSFAE 302

[Close]

BLAST of Bhi10G001402 vs. ExPASy Swiss-Prot
Match: P74518 (Ribosome hibernation promotion factor OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=hpf PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.6e-33
Identity = 85/201 (42.29%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 93  VKLIVQAKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RR 152
           +KL++Q  N+ +TEA+  +VEEKV +AV+   +L  +VDV LSV      +  RI    +
Sbjct: 1   MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSV-----ARNARITNKHK 60

Query: 153 CEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRSKVR 212
            EVT++     V+RA+E +E +YASIDLV+  I R+LRK KE+  D  +       S++ 
Sbjct: 61  AEVTVYA-NGTVIRAQEGSENLYASIDLVADKIARQLRKYKERIQD--KQHGNVKTSEIV 120

Query: 213 EPAPIVVEDEDEEVFEEDGEVIDEIVRRKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEET 272
           E  P+    E+  + +   E+  E++R KYF MPP+ IE+A+EQL+ +DHDFY FRN++T
Sbjct: 121 EDKPV----EENLIGDRAPELPSEVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFRNKDT 180

Query: 273 GEINILYKRKDGGYGLIIPKE 291
            EIN++Y R  GGYG+I P +
Sbjct: 181 DEINVIYIRNHGGYGVIQPHQ 189

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BLAST of Bhi10G001402 vs. ExPASy Swiss-Prot
Match: P47908 (Ribosome hibernation promotion factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=hpf PE=2 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 7.5e-31
Identity = 80/199 (40.20%), Postives = 123/199 (61.81%), Query Frame = 0


Query: 93  VKLIVQAKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEV 152
           +KL++Q  N+ +TE++  +VE K+ KA +       +VDV LSV      +     + EV
Sbjct: 1   MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANN--ARITDKHKAEV 60

Query: 153 TLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRSKVREPA 212
           T++     V+RA+E +E +YASIDLVS  I R+LRK KEK+  +  H++        + +
Sbjct: 61  TVYA-NGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQ-------EKTS 120

Query: 213 PIVVED--EDEEVFEEDGEVIDEIVRRKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETG 272
            ++ ED   D  + +   E+  E+VR KYF MPP+TI+EA+EQL+ +DHDFY F N++T 
Sbjct: 121 EVLPEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTN 180

Query: 273 EINILYKRKDGGYGLIIPK 290
            IN++Y R  GGYG+I P+
Sbjct: 181 AINVIYIRNHGGYGVIQPR 189

[Close]

BLAST of Bhi10G001402 vs. ExPASy Swiss-Prot
Match: Q49VV1 (Ribosome hibernation promotion factor OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=hpf PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.6e-19
Identity = 64/196 (32.65%), Postives = 114/196 (58.16%), Query Frame = 0


Query: 93  VKLIVQAKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEV 152
           ++  +  +NL +T+A++ ++EEK+GK ++++ + V      + V+  +        + EV
Sbjct: 2   IRFEIHGENLTITDAIRNYIEEKIGK-LERYFNDVPNATAHVKVKTYQ----NSATKIEV 61

Query: 153 TLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRSKVREPA 212
           T+  KK   +RAEE  + +YA IDL+++ ++R++RK K + + R R     +R +    A
Sbjct: 62  TIPLKK-VTLRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNR-----NRGEQEAFA 121

Query: 213 PIVVEDEDEEVFEEDGEVID--EIVRRKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETG 272
            +  E E  E+  ++ E  +  EI+R K F + P+  EEA+ Q+  + HDF+ F + ET 
Sbjct: 122 SLPEEKEAVEIQNDENEADNEIEIIRAKNFSLKPMDSEEAVLQMDLLGHDFFIFTDRETD 181

Query: 273 EINILYKRKDGGYGLI 287
             +I+YKRKDG YGLI
Sbjct: 182 GTSIVYKRKDGKYGLI 186

[Close]

BLAST of Bhi10G001402 vs. ExPASy Swiss-Prot
Match: Q9RVE7 (Ribosome hibernation promotion factor OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=hpf PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.9e-18
Identity = 65/195 (33.33%), Postives = 113/195 (57.95%), Query Frame = 0


Query: 97  VQAKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFT 156
           +  +N+E+TE ++++VEEK+ + + +++  + +  V L+VR  +     R  R EV L  
Sbjct: 6   LSGRNVEVTEPMREYVEEKLSR-LDRYTDQITDARVTLTVR--DVRNNERRNRVEVQL-N 65

Query: 157 KKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVV 216
              G++RAEE    +YA+ID  S +++R+LRK K       R+MK     +  EP P   
Sbjct: 66  VPGGIIRAEEHHADMYAAIDKASDVLERQLRKFKT------RYMKQRQEGR-PEPLPGPA 125

Query: 217 EDE-----DEEVFEEDGEVIDEIVRRKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGE 276
           E E          ++  E   EIVR+K F++ P++ E+A+ Q++ + HDFY F++ + G+
Sbjct: 126 EAEVNAQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVFQDLQ-GQ 185

Query: 277 INILYKRKDGGYGLI 287
             ++Y+R+DG YGLI
Sbjct: 186 TGVVYRRRDGHYGLI 188

[Close]

BLAST of Bhi10G001402 vs. NCBI nr
Match: XP_038900446.1 (ribosome-binding factor PSRP1, chloroplastic [Benincasa hispida])

HSP 1 Score: 589.0 bits (1517), Expect = 2.5e-164
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSLHFSALKVHALSCSSTASAFFNS 60
           MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSLHFSALKVHALSCSSTASAFFNS
Sbjct: 1   MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSLHFSALKVHALSCSSTASAFFNS 60

Query: 61  CKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKVGKAV 120
           CKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKVGKAV
Sbjct: 61  CKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKVGKAV 120

Query: 121 QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSS 180
           QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSS
Sbjct: 121 QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSS 180

Query: 181 IIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEEDGEVIDEIVRRKYF 240
           IIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEEDGEVIDEIVRRKYF
Sbjct: 181 IIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEEDGEVIDEIVRRKYF 240

Query: 241 DMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLESV 300
           DMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLESV
Sbjct: 241 DMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLESV 300

Query: 301 TIDAAREPSLAE 313
           TIDAAREPSLAE
Sbjct: 301 TIDAAREPSLAE 312

[Close]

BLAST of Bhi10G001402 vs. NCBI nr
Match: XP_004147328.1 (ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus] >KAE8651998.1 hypothetical protein Csa_016934 [Cucumis sativus])

HSP 1 Score: 519.6 bits (1337), Expect = 1.8e-143
Identity = 280/313 (89.46%), Postives = 293/313 (93.61%), Query Frame = 0


Query: 1   MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSLHFSALKVHALSCSSTASAFFNS 60
           MA LTSSM  +LL DHSL S    SSST+S+FPASFSLHFSALKVHAL  SS ASAFFNS
Sbjct: 1   MATLTSSMQANLLSDHSL-SPPFHSSSTVSYFPASFSLHFSALKVHAL--SSNASAFFNS 60

Query: 61  CKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKVGKAV 120
           CK+F T ETASRNRHASNSF++RM+WDGPLSSVKLIVQ KNLELTEAVKKHVEEKVGKAV
Sbjct: 61  CKNFGTIETASRNRHASNSFSIRMTWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAV 120

Query: 121 QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSS 180
           QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSS
Sbjct: 121 QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSS 180

Query: 181 IIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEED-GEVIDEIVRRKY 240
           IIQRKLRKIKEKDSDRGRH+KGFDRSKVREPAPIVVEDE+EEVF+ED GEVIDEIVR KY
Sbjct: 181 IIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKY 240

Query: 241 FDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLES 300
           FDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLE 
Sbjct: 241 FDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEP 300

Query: 301 VTIDAAREPSLAE 313
           VTI+A REPSLAE
Sbjct: 301 VTIEATREPSLAE 310

[Close]

BLAST of Bhi10G001402 vs. NCBI nr
Match: XP_008460813.1 (PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo] >TYK02023.1 ribosome-binding factor PSRP1 [Cucumis melo var. makuwa])

HSP 1 Score: 510.8 bits (1314), Expect = 8.5e-141
Identity = 276/313 (88.18%), Postives = 290/313 (92.65%), Query Frame = 0


Query: 1   MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSLHFSALKVHALSCSSTASAFFNS 60
           MA LTSSM  +LL DHSL      SSST+S+FPA FSLHFSALKVHAL  SS ASAFFNS
Sbjct: 1   MATLTSSMQANLLSDHSL-PPPHPSSSTVSYFPAPFSLHFSALKVHAL--SSNASAFFNS 60

Query: 61  CKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKVGKAV 120
           CK+F T ETASRNRHASNSF++RM+WDG LSSVKLIVQ KNLELTEAVKKHVEEKVGKAV
Sbjct: 61  CKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAV 120

Query: 121 QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSS 180
           QKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSS
Sbjct: 121 QKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSS 180

Query: 181 IIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEED-GEVIDEIVRRKY 240
           IIQRKLRKIKEKDSDRGRH+KGFDRSKVREPAPIVVEDE+EEVF+ED GEVIDEIVR KY
Sbjct: 181 IIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKY 240

Query: 241 FDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLES 300
           FDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLE 
Sbjct: 241 FDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEP 300

Query: 301 VTIDAAREPSLAE 313
           VT++AAREPSLAE
Sbjct: 301 VTVEAAREPSLAE 310

[Close]

BLAST of Bhi10G001402 vs. NCBI nr
Match: XP_022141073.1 (ribosome-binding factor PSRP1, chloroplastic [Momordica charantia])

HSP 1 Score: 482.6 bits (1241), Expect = 2.5e-132
Identity = 266/319 (83.39%), Postives = 278/319 (87.15%), Query Frame = 0


Query: 1   MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSL----HFSALKVHALSCSSTASA 60
           MA LTSSMHT+LL       S+ SSSST S FPASFSL    + SALK+H L  SS  S 
Sbjct: 1   MATLTSSMHTNLL-------SAPSSSSTFSTFPASFSLLTSTNSSALKIHPL--SSHTSP 60

Query: 61  FFNSCKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKV 120
           FFNSC  F T + A RNRHA+NSF +RMSWDGPLSSVKLIVQ KNLELTEAVKKHVEEKV
Sbjct: 61  FFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV 120

Query: 121 GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASID 180
           GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASID
Sbjct: 121 GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASID 180

Query: 181 LVSSIIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEE---VFEEDGEVIDE 240
           LVSSIIQRKLRKIKEKDSDRGRHMKGFDR KVREPAPIVVEDE+EE     E+ GEVIDE
Sbjct: 181 LVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDE 240

Query: 241 IVRRKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR 300
           IVR KYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR
Sbjct: 241 IVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR 300

Query: 301 AEKLESVTIDAAREPSLAE 313
           AEKLE VT++ AREPSLAE
Sbjct: 301 AEKLEPVTVEPAREPSLAE 310

[Close]

BLAST of Bhi10G001402 vs. NCBI nr
Match: XP_022922607.1 (ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 482.3 bits (1240), Expect = 3.3e-132
Identity = 267/319 (83.70%), Postives = 285/319 (89.34%), Query Frame = 0


Query: 1   MAALTSSMHTSLLPDHSLS-SSSSSSSSTISFFPASFSL----HFSALKVHALSCSSTAS 60
           MAALTSSM T+LL  HSL+ SSSSSSSST+S FP SFSL    + + LK HAL  SS AS
Sbjct: 1   MAALTSSMQTNLLSAHSLTPSSSSSSSSTVSTFPTSFSLPTSTNSAVLKTHAL--SSHAS 60

Query: 61  AFFNSCK-SFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEE 120
           AFFNSC   FRT   A R RHA+ SF++RMSWDGPLSSVKLIVQ KNLELTEAVKKHVEE
Sbjct: 61  AFFNSCNHCFRTIVVAPRKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEE 120

Query: 121 KVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYAS 180
           KVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYAS
Sbjct: 121 KVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYAS 180

Query: 181 IDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEED-GEVIDE 240
           IDLVSSI+QRKLRKIKEKDSD GRHMKGFDRSK+REPAPIVVEDE+EEV +ED GE IDE
Sbjct: 181 IDLVSSIMQRKLRKIKEKDSDHGRHMKGFDRSKIREPAPIVVEDEEEEVSQEDGGEAIDE 240

Query: 241 IVRRKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR 300
           IVR KYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G 
Sbjct: 241 IVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKEDGN 300

Query: 301 AEKLESVTIDAAREPSLAE 313
           AEK+E+VT++ ARE SLAE
Sbjct: 301 AEKIETVTVEVAREASLAE 317

[Close]

BLAST of Bhi10G001402 vs. ExPASy TrEMBL
Match: A0A5D3BQR1 (Ribosome-binding factor PSRP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00050 PE=3 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 4.1e-141
Identity = 276/313 (88.18%), Postives = 290/313 (92.65%), Query Frame = 0


Query: 1   MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSLHFSALKVHALSCSSTASAFFNS 60
           MA LTSSM  +LL DHSL      SSST+S+FPA FSLHFSALKVHAL  SS ASAFFNS
Sbjct: 1   MATLTSSMQANLLSDHSL-PPPHPSSSTVSYFPAPFSLHFSALKVHAL--SSNASAFFNS 60

Query: 61  CKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKVGKAV 120
           CK+F T ETASRNRHASNSF++RM+WDG LSSVKLIVQ KNLELTEAVKKHVEEKVGKAV
Sbjct: 61  CKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAV 120

Query: 121 QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSS 180
           QKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSS
Sbjct: 121 QKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSS 180

Query: 181 IIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEED-GEVIDEIVRRKY 240
           IIQRKLRKIKEKDSDRGRH+KGFDRSKVREPAPIVVEDE+EEVF+ED GEVIDEIVR KY
Sbjct: 181 IIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKY 240

Query: 241 FDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLES 300
           FDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLE 
Sbjct: 241 FDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEP 300

Query: 301 VTIDAAREPSLAE 313
           VT++AAREPSLAE
Sbjct: 301 VTVEAAREPSLAE 310

[Close]

BLAST of Bhi10G001402 vs. ExPASy TrEMBL
Match: A0A1S3CCT7 (ribosome-binding factor PSRP1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499579 PE=3 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 4.1e-141
Identity = 276/313 (88.18%), Postives = 290/313 (92.65%), Query Frame = 0


Query: 1   MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSLHFSALKVHALSCSSTASAFFNS 60
           MA LTSSM  +LL DHSL      SSST+S+FPA FSLHFSALKVHAL  SS ASAFFNS
Sbjct: 1   MATLTSSMQANLLSDHSL-PPPHPSSSTVSYFPAPFSLHFSALKVHAL--SSNASAFFNS 60

Query: 61  CKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKVGKAV 120
           CK+F T ETASRNRHASNSF++RM+WDG LSSVKLIVQ KNLELTEAVKKHVEEKVGKAV
Sbjct: 61  CKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAV 120

Query: 121 QKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSS 180
           QKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSS
Sbjct: 121 QKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSS 180

Query: 181 IIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEED-GEVIDEIVRRKY 240
           IIQRKLRKIKEKDSDRGRH+KGFDRSKVREPAPIVVEDE+EEVF+ED GEVIDEIVR KY
Sbjct: 181 IIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKY 240

Query: 241 FDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLES 300
           FDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLE 
Sbjct: 241 FDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEP 300

Query: 301 VTIDAAREPSLAE 313
           VT++AAREPSLAE
Sbjct: 301 VTVEAAREPSLAE 310

[Close]

BLAST of Bhi10G001402 vs. ExPASy TrEMBL
Match: A0A6J1CJG5 (ribosome-binding factor PSRP1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011561 PE=3 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.2e-132
Identity = 266/319 (83.39%), Postives = 278/319 (87.15%), Query Frame = 0


Query: 1   MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSL----HFSALKVHALSCSSTASA 60
           MA LTSSMHT+LL       S+ SSSST S FPASFSL    + SALK+H L  SS  S 
Sbjct: 1   MATLTSSMHTNLL-------SAPSSSSTFSTFPASFSLLTSTNSSALKIHPL--SSHTSP 60

Query: 61  FFNSCKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKV 120
           FFNSC  F T + A RNRHA+NSF +RMSWDGPLSSVKLIVQ KNLELTEAVKKHVEEKV
Sbjct: 61  FFNSCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV 120

Query: 121 GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASID 180
           GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASID
Sbjct: 121 GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRGEEDAETVYASID 180

Query: 181 LVSSIIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEE---VFEEDGEVIDE 240
           LVSSIIQRKLRKIKEKDSDRGRHMKGFDR KVREPAPIVVEDE+EE     E+ GEVIDE
Sbjct: 181 LVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVREPAPIVVEDEEEEEEVSLEDSGEVIDE 240

Query: 241 IVRRKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR 300
           IVR KYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR
Sbjct: 241 IVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR 300

Query: 301 AEKLESVTIDAAREPSLAE 313
           AEKLE VT++ AREPSLAE
Sbjct: 301 AEKLEPVTVEPAREPSLAE 310

[Close]

BLAST of Bhi10G001402 vs. ExPASy TrEMBL
Match: A0A6J1E3S3 (ribosome-binding factor PSRP1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430564 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.6e-132
Identity = 267/319 (83.70%), Postives = 285/319 (89.34%), Query Frame = 0


Query: 1   MAALTSSMHTSLLPDHSLS-SSSSSSSSTISFFPASFSL----HFSALKVHALSCSSTAS 60
           MAALTSSM T+LL  HSL+ SSSSSSSST+S FP SFSL    + + LK HAL  SS AS
Sbjct: 1   MAALTSSMQTNLLSAHSLTPSSSSSSSSTVSTFPTSFSLPTSTNSAVLKTHAL--SSHAS 60

Query: 61  AFFNSCK-SFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEE 120
           AFFNSC   FRT   A R RHA+ SF++RMSWDGPLSSVKLIVQ KNLELTEAVKKHVEE
Sbjct: 61  AFFNSCNHCFRTIVVAPRKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEE 120

Query: 121 KVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYAS 180
           KVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYAS
Sbjct: 121 KVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYAS 180

Query: 181 IDLVSSIIQRKLRKIKEKDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEED-GEVIDE 240
           IDLVSSI+QRKLRKIKEKDSD GRHMKGFDRSK+REPAPIVVEDE+EEV +ED GE IDE
Sbjct: 181 IDLVSSIMQRKLRKIKEKDSDHGRHMKGFDRSKIREPAPIVVEDEEEEVSQEDGGEAIDE 240

Query: 241 IVRRKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGR 300
           IVR KYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G 
Sbjct: 241 IVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKEDGN 300

Query: 301 AEKLESVTIDAAREPSLAE 313
           AEK+E+VT++ ARE SLAE
Sbjct: 301 AEKIETVTVEVAREASLAE 317

[Close]

BLAST of Bhi10G001402 vs. ExPASy TrEMBL
Match: A0A6J1J523 (ribosome-binding factor PSRP1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482691 PE=3 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 4.7e-129
Identity = 256/302 (84.77%), Postives = 272/302 (90.07%), Query Frame = 0


Query: 17  SLSSSSSSSSSTISFFPASFSL----HFSALKVHALSCSSTASAFFNSCK-SFRTFETAS 76
           S SSSSSSSSST+S FP SFSL    + + LK+HAL  SS ASAFFNSC   FRT   A 
Sbjct: 24  SSSSSSSSSSSTVSTFPTSFSLPTSTNSAVLKIHAL--SSHASAFFNSCNHCFRTIVIAP 83

Query: 77  RNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELTEAVKKHVEEKVGKAVQKHSHLVREVD 136
           R RHA+ SF++RMSWDGPLSSVKLIVQ KNLELTEAVKKHVEEKVGKAVQKHSHLVREVD
Sbjct: 84  RKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVD 143

Query: 137 VRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKE 196
           VRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKE
Sbjct: 144 VRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIMQRKLRKIKE 203

Query: 197 KDSDRGRHMKGFDRSKVREPAPIVVEDEDEEVFEED-GEVIDEIVRRKYFDMPPLTIEEA 256
           KDSD GRHMKGFDRSK+REPAPIVVEDE+EEV +ED GE IDEIVR KYFDMPPLT+EEA
Sbjct: 204 KDSDHGRHMKGFDRSKIREPAPIVVEDEEEEVSQEDGGEAIDEIVRTKYFDMPPLTVEEA 263

Query: 257 IEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGRAEKLESVTIDAAREPSL 313
           IEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK+E+VT++ ARE SL
Sbjct: 264 IEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGNAEKIETVTVEVAREASL 323

The following BLAST results are available for this feature:

BLAST of Bhi10G001402 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24490.1	3.4e-95	72.00	30S ribosomal protein, putative	[more]

BLAST of Bhi10G001402 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19954	7.1e-90	64.58	Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSR...	[more]
P74518	3.6e-33	42.29	Ribosome hibernation promotion factor OS=Synechocystis sp. (strain PCC 6803 / Ka...	[more]
P47908	7.5e-31	40.20	Ribosome hibernation promotion factor OS=Synechococcus sp. (strain ATCC 27264 / ...	[more]
Q49VV1	6.6e-19	32.65	Ribosome hibernation promotion factor OS=Staphylococcus saprophyticus subsp. sap...	[more]
Q9RVE7	1.9e-18	33.33	Ribosome hibernation promotion factor OS=Deinococcus radiodurans (strain ATCC 13...	[more]

BLAST of Bhi10G001402 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900446.1	2.5e-164	100.00	ribosome-binding factor PSRP1, chloroplastic [Benincasa hispida]	[more]
XP_004147328.1	1.8e-143	89.46	ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus] >KAE8651998.1 hyp...	[more]
XP_008460813.1	8.5e-141	88.18	PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo] >TYK02023...	[more]
XP_022141073.1	2.5e-132	83.39	ribosome-binding factor PSRP1, chloroplastic [Momordica charantia]	[more]
XP_022922607.1	3.3e-132	83.70	ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]	[more]

BLAST of Bhi10G001402 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQR1	4.1e-141	88.18	Ribosome-binding factor PSRP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CCT7	4.1e-141	88.18	ribosome-binding factor PSRP1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1CJG5	1.2e-132	83.39	ribosome-binding factor PSRP1, chloroplastic OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1E3S3	1.6e-132	83.70	ribosome-binding factor PSRP1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J523	4.7e-129	84.77	ribosome-binding factor PSRP1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036567	Ribosome hibernation promotion factor-like	GENE3D	3.30.160.100		coord: 94..204 e-value: 3.8E-21 score: 77.3
IPR036567	Ribosome hibernation promotion factor-like	SUPERFAMILY	69754	Ribosome binding protein Y (YfiA homologue)	coord: 94..199
IPR038416	Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily	GENE3D	3.30.505.50		coord: 244..296 e-value: 5.7E-21 score: 75.8
IPR003489	Ribosome hibernation promoting factor/RaiA	TIGRFAM	TIGR00741	TIGR00741	coord: 94..196 e-value: 9.2E-18 score: 62.6
IPR003489	Ribosome hibernation promoting factor/RaiA	PFAM	PF02482	Ribosomal_S30AE	coord: 96..192 e-value: 1.2E-21 score: 77.3
IPR003489	Ribosome hibernation promoting factor/RaiA	CDD	cd00552	RaiA	coord: 94..192 e-value: 8.4232E-24 score: 91.0373
IPR032528	Sigma 54 modulation/S30EA ribosomal protein, C-terminal	PFAM	PF16321	Ribosom_S30AE_C	coord: 232..285 e-value: 2.4E-25 score: 88.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR33231:SF1	30S RIBOSOMAL PROTEIN	coord: 79..292
None	No IPR available	PANTHER	PTHR33231	30S RIBOSOMAL PROTEIN	coord: 79..292
IPR034694	Ribosome hibernation promoting factor, long/plastid	HAMAP	MF_00839	HPF	coord: 93..289 score: 20.098417

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001402	Bhi10M001402	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045900	negative regulation of translational elongation
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0043024	ribosomal small subunit binding
molecular_function	GO:0043022	ribosome binding