Bhi10G000602 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G000602
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Mitochondrial 28S Ribosomal protein
Location	chr10: 15862812 .. 15865206 (-)
RNA-Seq Expression	Bhi10G000602
Synteny	Bhi10G000602

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAATTTGTTTTGTTTAACCAATTTGTAAAAACAAAAGGATCGAGCAGAAGAAATGCACGAAAATTACCAATTTTCACTTGCCTAAACCCCGAAGAGTGCAGCGAAATAGCGATACCGAAGAGAAGGCCAACCAAACCTAGAGAGACACGCCAATGGCTGTCGTCGCCAACAGAACTGCGATCAGTCGTGCCCTAGATTTCTCCAGGTTATCTTCTACCTTTATCAGAACCTTCAGCACCTCTTCGCCGTCAACTTCCTCTTCGAACCCCAATGCCTCCACTGCTTCGACTAAAAACAAACGGAGGAAGAAGAAGAAGAACCTGTTCGAAGTAGTTCAGTTTTTGCCCAATTGGGGAGTAGGATACCATGTCGCCAAAGCTCACTGGGATGAAATATCGTACCAGATCACCAAAATCAATCTGTACAAGGTTAGTTTCCATCTCGTTTTTTTTCTTTGATGTATGTTGCGGTTCATTTGAGATCAATCTCCCTCTATAATCTGCGGAAATTTTGAAACAAATGGTATTCAGTCTCTGCCAGTGATTTCTATTTCTTGTGTGCATTCAAGTAAATTGAACGGTTGAGGGGTTTTAAAGGATTTGTTTCGGGTAAAATATCAGTGGGATTGCCTAATTTCTGTAATCGTTTACTAAGATTTGTAGACTTTTCCTCTGACTATTGATAATCAAACAGGAAGTGTAACAATCTTTTTTCTTTTGGGGCAATCTGATTGAGGGTTTAAGTTTTTCTTTTGCCTTTTTTTCTCACAGAATGGCACGCACGGCAAGGCATGGGGCATTGCTCATAAAGATGGTTAGTATATCACGAAATTAGTTCCACAATCGTTATTGGAATTTCATTTTTGTTTTTATTTCACCATGTTGCTGAAATTTTGTTCTAATATTTGTTCAGAAGAATGAGCAACAATTGAATGTCTTATACGTTCTTTTTACCCAGGCTAAATTCTATAATTTGGTACCATGACATCATGAGCTAATGCTTTATAGTTGATTTAGCTGCGTGATTGGAAAAGATGAAAGTCCTAACATTATTCAATATTCACTGTTTACTGATCTTCGCTCTTGATGTATAGGATTATGCTTCATGACAATATAGGCCTCGTTTGATGACGATTCTGTTTATAGTTTTTCTTGTTTCCTCTCCATTTTTGTACTATTATTTTTAAGAAATTTTTGAATTCTTAGTCAAATTCTGAAAACGAAATAAGTTTTTGAAAACTAATTTTTTTAGTTTTCAAATATTAGCTTGGTTTTTGAAATATTGGTAGAAAGTGGATAATAAAACAAAGAAACTTATAGATGGAAGTATTGTTTGTAAATTTAATTTTTAAAAATCAAATAGTTATAAAAAAGGATCGATCCTAATGGTTTGCAAGTAAAGTATTCAAGTTTGGACTTTTGAGGCATGAGGTCCTGAAAGCTTAAACTGGAGATAGGTCAAGTAAGTTAGCCTCCTTTATATAATTATATTGGTCCATTTTGAAATCACTACTGAAGCAAGTCCGGACTTGGTAATTGATATACCAACCATTATTGAATTGCTTTAAATGAATGTTAAAATTCCCTTTTGAAGTCTCTATTGAGGCAACTCCGGACTTGGTAATTGATATAGTATAGTCAACCATTATTGTATTGCTTAAAACTTGAGTTTCTATCAACTCAAATTTCTGTATGTTTTTGTTGCTATTGGGATACTTTCATCAATGACCGAGGTTGAACAATGTTACAAAAAATTTCCAGGCACGCCCATTGCCGAAGCTCCAAAGAAAATCAGCGGAGTTCACAAGCGCTGTTGGAAGTATATCGCTAGCTTGCCGAGATCGGGAGAAAGCAACCCATCAGCTGAAGTTCAAACTTCATGATTGCAGAGAAGTTTCAGTTGCTGATTCTTTTTGGCCAACCTTATTTCCTGGTGCAAAGAGTTATAGGTTCTCAAGAGTAGTAGTTCTTAAACATAGTCAGGTTTTCTTCTGTGCTTTACTTGTTTCTGAGATAAAGAAAGATCAATCATCCGAACTAAGTATTAAACTTCTCATCTATTCTCAGTTACTGGTGGATTTTCATGTTTAATTGAGGTTGAAGAATCTTGTATTGTGTGCTTTGTCCTGCTGTGAGATGAATACAACCACTTTTCCTTCTTGAAACATGGATGGTAAGGTTGTTTGTAGGGTCTTCAAATAACTCGACAACTCGAACAATCTGGACTACCTATCCCAAAATATAAGGGTTGGGTTGGGTTAGTTTTGTTTTTAGGTTGGGTTGGATTGGGTTGTGGGTTGACTAAAAAAAAATTGGATTGACCCAACCGAACCCATGAACAAAACTAAACCAACCCAACTCGAATTATATATATATATTCCTCTTTGTTTAAA

mRNA sequence

ATTTAATTTGTTTTGTTTAACCAATTTGTAAAAACAAAAGGATCGAGCAGAAGAAATGCACGAAAATTACCAATTTTCACTTGCCTAAACCCCGAAGAGTGCAGCGAAATAGCGATACCGAAGAGAAGGCCAACCAAACCTAGAGAGACACGCCAATGGCTGTCGTCGCCAACAGAACTGCGATCAGTCGTGCCCTAGATTTCTCCAGGTTATCTTCTACCTTTATCAGAACCTTCAGCACCTCTTCGCCGTCAACTTCCTCTTCGAACCCCAATGCCTCCACTGCTTCGACTAAAAACAAACGGAGGAAGAAGAAGAAGAACCTGTTCGAAGTAGTTCAGTTTTTGCCCAATTGGGGAGTAGGATACCATGTCGCCAAAGCTCACTGGGATGAAATATCGTACCAGATCACCAAAATCAATCTGTACAAGAATGGCACGCACGGCAAGGCATGGGGCATTGCTCATAAAGATGGCACGCCCATTGCCGAAGCTCCAAAGAAAATCAGCGGAGTTCACAAGCGCTGTTGGAAGTATATCGCTAGCTTGCCGAGATCGGGAGAAAGCAACCCATCAGCTGAAGTTCAAACTTCATGATTGCAGAGAAGTTTCAGTTGCTGATTCTTTTTGGCCAACCTTATTTCCTGGTGCAAAGAGTTATAGGTTCTCAAGAGTAGTAGTTCTTAAACATAGTCAGGTTTTCTTCTGTGCTTTACTTGTTTCTGAGATAAAGAAAGATCAATCATCCGAACTAAGTATTAAACTTCTCATCTATTCTCAGTTACTGGTGGATTTTCATGTTTAATTGAGGTTGAAGAATCTTGTATTGTGTGCTTTGTCCTGCTGTGAGATGAATACAACCACTTTTCCTTCTTGAAACATGGATGGTAAGGTTGTTTGTAGGGTCTTCAAATAACTCGACAACTCGAACAATCTGGACTACCTATCCCAAAATATAAGGGTTGGGTTGGGTTAGTTTTGTTTTTAGGTTGGGTTGGATTGGGTTGTGGGTTGACTAAAAAAAAATTGGATTGACCCAACCGAACCCATGAACAAAACTAAACCAACCCAACTCGAATTATATATATATATTCCTCTTTGTTTAAA

Coding sequence (CDS)

ATGGCTGTCGTCGCCAACAGAACTGCGATCAGTCGTGCCCTAGATTTCTCCAGGTTATCTTCTACCTTTATCAGAACCTTCAGCACCTCTTCGCCGTCAACTTCCTCTTCGAACCCCAATGCCTCCACTGCTTCGACTAAAAACAAACGGAGGAAGAAGAAGAAGAACCTGTTCGAAGTAGTTCAGTTTTTGCCCAATTGGGGAGTAGGATACCATGTCGCCAAAGCTCACTGGGATGAAATATCGTACCAGATCACCAAAATCAATCTGTACAAGAATGGCACGCACGGCAAGGCATGGGGCATTGCTCATAAAGATGGCACGCCCATTGCCGAAGCTCCAAAGAAAATCAGCGGAGTTCACAAGCGCTGTTGGAAGTATATCGCTAGCTTGCCGAGATCGGGAGAAAGCAACCCATCAGCTGAAGTTCAAACTTCATGA

Protein sequence

MAVVANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQFLPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKRCWKYIASLPRSGESNPSAEVQTS

Homology

[Close]

BLAST of Bhi10G000602 vs. TAIR 10
Match: AT5G58990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-40
Identity = 85/149 (57.05%), Postives = 110/149 (73.83%), Query Frame = 0


Query: 1   MAVVANRTAISR--ALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNK-RRKKKKNL 60
           MA+     AISR   +    LS + +R FS ++PS +S+  + + +S  NK +R+KKKNL
Sbjct: 1   MAMTLMNRAISRTETVGAFSLSLSLLRNFS-AAPSAASTPASENPSSDSNKPKRRKKKNL 60

Query: 61  FEVVQFLPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKI 120
            EV QFLPNWG+GYH+AKAHW+ ISY+ITKINLYK+G HGKAWGI HKDG   AEAPKKI
Sbjct: 61  IEVAQFLPNWGIGYHMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKI 120

Query: 121 SGVHKRCWKYIASLPRSGESNPSAEVQTS 147
           SGVHKRCWKYI +L ++  +  +A+VQ +
Sbjct: 121 SGVHKRCWKYIPNLSKTTPATTTADVQAA 148

[Close]

BLAST of Bhi10G000602 vs. TAIR 10
Match: AT5G52370.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 162.5 bits (410), Expect = 2.5e-40
Identity = 85/148 (57.43%), Postives = 105/148 (70.95%), Query Frame = 0


Query: 1   MAVVANRTAISR--ALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLF 60
           MA+     AISR   +   RLS   +R FS    + +S NP++ ++  K   R+KKKNL 
Sbjct: 1   MAMTLINRAISRTETVGAFRLSLNLLRNFSA---APASENPSSDSSKPK---RRKKKNLI 60

Query: 61  EVVQFLPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKIS 120
           EV QFLPNWG+GYH+AKAHW+ ISY+ITKINLYK+G HGKAWGI HKDG   AEAPKKIS
Sbjct: 61  EVAQFLPNWGIGYHMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKIS 120

Query: 121 GVHKRCWKYIASLPRSGESNPSAEVQTS 147
           GVHKRCWKYI +L ++  +  SA VQ +
Sbjct: 121 GVHKRCWKYIPNLSKTAPATTSAHVQAA 142

[Close]

BLAST of Bhi10G000602 vs. NCBI nr
Match: XP_038900676.1 (uncharacterized protein LOC120087826 [Benincasa hispida])

HSP 1 Score: 290.8 bits (743), Expect = 6.5e-75
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MAVVANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEV 60
           MAVVANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEV
Sbjct: 1   MAVVANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEV 60

Query: 61  VQFLPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGV 120
           VQFLPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGV
Sbjct: 61  VQFLPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGV 120

Query: 121 HKRCWKYIASLPRSGESNPSAEVQTS 147
           HKRCWKYIASLPRSGESNPSAEVQTS
Sbjct: 121 HKRCWKYIASLPRSGESNPSAEVQTS 146

[Close]

BLAST of Bhi10G000602 vs. NCBI nr
Match: XP_004143137.1 (uncharacterized protein LOC101207989 [Cucumis sativus] >KGN47116.1 hypothetical protein Csa_020646 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65
Identity = 128/143 (89.51%), Postives = 136/143 (95.10%), Query Frame = 0


Query: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63
           VANRTAISRALDFSRLSS+F+RTFS+SSPSTSSSNPNAS  S++ KRRKKKKNLFEVVQF
Sbjct: 3   VANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQF 62

Query: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123
           LPNWGVGYHVAK+HWDEISYQITKINLYK+GTHGKAWGIAHK+GTPI EAPKKISGVHKR
Sbjct: 63  LPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGTPIVEAPKKISGVHKR 122

Query: 124 CWKYIASLPRSGESNPSAEVQTS 147
           CWKYIASLP SGES  SAEVQTS
Sbjct: 123 CWKYIASLPHSGESKTSAEVQTS 145

[Close]

BLAST of Bhi10G000602 vs. NCBI nr
Match: XP_008464074.1 (PREDICTED: uncharacterized protein LOC103502049 [Cucumis melo] >KAA0061862.1 uncharacterized protein E6C27_scaffold89G001010 [Cucumis melo var. makuwa] >TYK15394.1 uncharacterized protein E5676_scaffold571G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64
Identity = 126/143 (88.11%), Postives = 136/143 (95.10%), Query Frame = 0


Query: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63
           VANRTAISRALDFSRLSS+FIRTF++SSPSTSSSNPNAS +S++ KRRKKKKNLFEV+QF
Sbjct: 3   VANRTAISRALDFSRLSSSFIRTFTSSSPSTSSSNPNASPSSSQTKRRKKKKNLFEVIQF 62

Query: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123
           LPNWGVGYHVAK+HWDEISYQITKINLYK+GTHGKAWGIAHK+G PI EAPKKISGVHKR
Sbjct: 63  LPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGMPIVEAPKKISGVHKR 122

Query: 124 CWKYIASLPRSGESNPSAEVQTS 147
           CWKYIASLPR GES  SAEVQTS
Sbjct: 123 CWKYIASLPRLGESKTSAEVQTS 145

[Close]

BLAST of Bhi10G000602 vs. NCBI nr
Match: XP_022944512.1 (uncharacterized protein LOC111448948 [Cucurbita moschata])

HSP 1 Score: 253.8 bits (647), Expect = 8.8e-64
Identity = 125/143 (87.41%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63
           VANR+AIS AL FSRLSS+F R+F+TSSPS S+ NPNA TASTK KRRKKKKNLFEVVQF
Sbjct: 3   VANRSAISGALHFSRLSSSFTRSFTTSSPSPSTPNPNAPTASTKTKRRKKKKNLFEVVQF 62

Query: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123
           LPNWGVGYHVAKAHWDEISYQITK+NLYK+GTHGKAWG+AHKDGT IAEAPKKISGVHKR
Sbjct: 63  LPNWGVGYHVAKAHWDEISYQITKLNLYKSGTHGKAWGVAHKDGTRIAEAPKKISGVHKR 122

Query: 124 CWKYIASLPRSGESNPSAEVQTS 147
           CWKYIASLPRSG+S+PSAEVQTS
Sbjct: 123 CWKYIASLPRSGDSDPSAEVQTS 145

[Close]

BLAST of Bhi10G000602 vs. NCBI nr
Match: XP_023532313.1 (uncharacterized protein LOC111794505 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.8 bits (634), Expect = 2.8e-62
Identity = 126/154 (81.82%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63
           VANRT ISRALDFSRL+S+FIR FSTS+ STSSS+P+AS A++KNKRRKKKKNLFEV+QF
Sbjct: 3   VANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVIQF 62

Query: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123
           LPNWGVGYHVAK HWDEISYQITKINLYKNGTHGKAWGIAHK+G PIAEAPKKISGVHKR
Sbjct: 63  LPNWGVGYHVAKGHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVHKR 122

Query: 124 CWKYIASLPRS-----------GESNPSAEVQTS 147
           CWKYI SLPRS           GESNPSAE QTS
Sbjct: 123 CWKYIPSLPRSSENEPTTMTNLGESNPSAEAQTS 156

[Close]

BLAST of Bhi10G000602 vs. ExPASy TrEMBL
Match: A0A0A0KH76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188090 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.8e-66
Identity = 128/143 (89.51%), Postives = 136/143 (95.10%), Query Frame = 0


Query: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63
           VANRTAISRALDFSRLSS+F+RTFS+SSPSTSSSNPNAS  S++ KRRKKKKNLFEVVQF
Sbjct: 3   VANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQF 62

Query: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123
           LPNWGVGYHVAK+HWDEISYQITKINLYK+GTHGKAWGIAHK+GTPI EAPKKISGVHKR
Sbjct: 63  LPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGTPIVEAPKKISGVHKR 122

Query: 124 CWKYIASLPRSGESNPSAEVQTS 147
           CWKYIASLP SGES  SAEVQTS
Sbjct: 123 CWKYIASLPHSGESKTSAEVQTS 145

[Close]

BLAST of Bhi10G000602 vs. ExPASy TrEMBL
Match: A0A5A7V0Y6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00360 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.6e-65
Identity = 126/143 (88.11%), Postives = 136/143 (95.10%), Query Frame = 0


Query: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63
           VANRTAISRALDFSRLSS+FIRTF++SSPSTSSSNPNAS +S++ KRRKKKKNLFEV+QF
Sbjct: 3   VANRTAISRALDFSRLSSSFIRTFTSSSPSTSSSNPNASPSSSQTKRRKKKKNLFEVIQF 62

Query: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123
           LPNWGVGYHVAK+HWDEISYQITKINLYK+GTHGKAWGIAHK+G PI EAPKKISGVHKR
Sbjct: 63  LPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGMPIVEAPKKISGVHKR 122

Query: 124 CWKYIASLPRSGESNPSAEVQTS 147
           CWKYIASLPR GES  SAEVQTS
Sbjct: 123 CWKYIASLPRLGESKTSAEVQTS 145

[Close]

BLAST of Bhi10G000602 vs. ExPASy TrEMBL
Match: A0A1S3CKN2 (uncharacterized protein LOC103502049 OS=Cucumis melo OX=3656 GN=LOC103502049 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.6e-65
Identity = 126/143 (88.11%), Postives = 136/143 (95.10%), Query Frame = 0


Query: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63
           VANRTAISRALDFSRLSS+FIRTF++SSPSTSSSNPNAS +S++ KRRKKKKNLFEV+QF
Sbjct: 3   VANRTAISRALDFSRLSSSFIRTFTSSSPSTSSSNPNASPSSSQTKRRKKKKNLFEVIQF 62

Query: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123
           LPNWGVGYHVAK+HWDEISYQITKINLYK+GTHGKAWGIAHK+G PI EAPKKISGVHKR
Sbjct: 63  LPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGMPIVEAPKKISGVHKR 122

Query: 124 CWKYIASLPRSGESNPSAEVQTS 147
           CWKYIASLPR GES  SAEVQTS
Sbjct: 123 CWKYIASLPRLGESKTSAEVQTS 145

[Close]

BLAST of Bhi10G000602 vs. ExPASy TrEMBL
Match: A0A6J1FVV3 (uncharacterized protein LOC111448948 OS=Cucurbita moschata OX=3662 GN=LOC111448948 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.3e-64
Identity = 125/143 (87.41%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63
           VANR+AIS AL FSRLSS+F R+F+TSSPS S+ NPNA TASTK KRRKKKKNLFEVVQF
Sbjct: 3   VANRSAISGALHFSRLSSSFTRSFTTSSPSPSTPNPNAPTASTKTKRRKKKKNLFEVVQF 62

Query: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123
           LPNWGVGYHVAKAHWDEISYQITK+NLYK+GTHGKAWG+AHKDGT IAEAPKKISGVHKR
Sbjct: 63  LPNWGVGYHVAKAHWDEISYQITKLNLYKSGTHGKAWGVAHKDGTRIAEAPKKISGVHKR 122

Query: 124 CWKYIASLPRSGESNPSAEVQTS 147
           CWKYIASLPRSG+S+PSAEVQTS
Sbjct: 123 CWKYIASLPRSGDSDPSAEVQTS 145

[Close]

BLAST of Bhi10G000602 vs. ExPASy TrEMBL
Match: A0A6J1KZ28 (uncharacterized protein LOC111500023 OS=Cucurbita maxima OX=3661 GN=LOC111500023 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 127/154 (82.47%), Postives = 136/154 (88.31%), Query Frame = 0


Query: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63
           VANRT ISRALDFSRL+S+FIR FSTS+ STSSS+P+AS A++KNKRRKKKKNLFEV+QF
Sbjct: 3   VANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVIQF 62

Query: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123
           LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHK+G PIAEAPKKISGVHKR
Sbjct: 63  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVHKR 122

Query: 124 CWKYIASLPRS-----------GESNPSAEVQTS 147
           CWKYI SL RS           GESNPSAEVQTS
Sbjct: 123 CWKYIPSLSRSSENEPTTMTNLGESNPSAEVQTS 156

The following BLAST results are available for this feature:

BLAST of Bhi10G000602 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58990.1	1.9e-40	57.05	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G52370.1	2.5e-40	57.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

BLAST of Bhi10G000602 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi10G000602 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900676.1	6.5e-75	100.00	uncharacterized protein LOC120087826 [Benincasa hispida]	[more]
XP_004143137.1	1.6e-65	89.51	uncharacterized protein LOC101207989 [Cucumis sativus] >KGN47116.1 hypothetical ...	[more]
XP_008464074.1	1.8e-64	88.11	PREDICTED: uncharacterized protein LOC103502049 [Cucumis melo] >KAA0061862.1 unc...	[more]
XP_022944512.1	8.8e-64	87.41	uncharacterized protein LOC111448948 [Cucurbita moschata]	[more]
XP_023532313.1	2.8e-62	81.82	uncharacterized protein LOC111794505 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Bhi10G000602 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH76	7.8e-66	89.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188090 PE=4 SV=1	[more]
A0A5A7V0Y6	8.6e-65	88.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CKN2	8.6e-65	88.11	uncharacterized protein LOC103502049 OS=Cucumis melo OX=3656 GN=LOC103502049 PE=...	[more]
A0A6J1FVV3	4.3e-64	87.41	uncharacterized protein LOC111448948 OS=Cucurbita moschata OX=3662 GN=LOC1114489...	[more]
A0A6J1KZ28	1.4e-62	82.47	uncharacterized protein LOC111500023 OS=Cucurbita maxima OX=3661 GN=LOC111500023...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032053	Mitochondrial 28S ribosomal protein S34	PFAM	PF16053	MRP-S34	coord: 55..128 e-value: 4.4E-11 score: 42.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..53
None	No IPR available	PANTHER	PTHR35316	28S RIBOSOMAL S34 PROTEIN	coord: 2..143
None	No IPR available	PANTHER	PTHR35316:SF1	28S RIBOSOMAL S34 PROTEIN	coord: 2..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000602	Bhi10M000602	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003735	structural constituent of ribosome