Bhi10G000535 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G000535
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr10: 14545824 .. 14546444 (-)
RNA-Seq Expression	Bhi10G000535
Synteny	Bhi10G000535

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATCGAGTCCGCCGCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCGTGGTCAATCTCGACCATCGCCATCGTCTGCATAGTCTTTCTACTGTTGAGCAACTATAGACTTTTGAAACATCTGTTCCGTGTGTTTCATGGACTGATTTCCGGTCGACCTAGGGTCCAATTTGAGGAAAACCCTAATGGTCCTTCTCTGCAAGTCCATGGACATGGATTGGAGGCCTCCATGATTCGTTTGCTACCTATATCACAGTTCAAAAAGAATGAAGAATCCGAATCAACGGCAAGCTTCAATACGGAATGCGCTGTTTGTTTGGGTGAATTCGAAGAAGGGGAATTGATTAAACACTTACCGAATTGCAATCATTCGTTTCATAGTTGTTGCATCGACGCCTGGTTTCGTGATCATTCGAGTTGCCCTCTCTGCAGATTGCAAGTCTTGAGTTTCTCCACTCGCGATTCTTCTTCGGCAATGATGGAGACGCTTAGAGGAGAAAACGCCCTACGAGAAAGAGTAGCGCATTATGAAACGATTCGTGCTCAAATTCTGCAGCAGCCGGAATTGAGAAGAGATGCATCGGTTCAAGGATCAGATCAACGAAATCGATGA

mRNA sequence

ATGCCATCGAGTCCGCCGCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCGTGGTCAATCTCGACCATCGCCATCGTCTGCATAGTCTTTCTACTGTTGAGCAACTATAGACTTTTGAAACATCTGTTCCGTGTGTTTCATGGACTGATTTCCGGTCGACCTAGGGTCCAATTTGAGGAAAACCCTAATGGTCCTTCTCTGCAAGTCCATGGACATGGATTGGAGGCCTCCATGATTCGTTTGCTACCTATATCACAGTTCAAAAAGAATGAAGAATCCGAATCAACGGCAAGCTTCAATACGGAATGCGCTGTTTGTTTGGGTGAATTCGAAGAAGGGGAATTGATTAAACACTTACCGAATTGCAATCATTCGTTTCATAGTTGTTGCATCGACGCCTGGTTTCGTGATCATTCGAGTTGCCCTCTCTGCAGATTGCAAGTCTTGAGTTTCTCCACTCGCGATTCTTCTTCGGCAATGATGGAGACGCTTAGAGGAGAAAACGCCCTACGAGAAAGAGTAGCGCATTATGAAACGATTCGTGCTCAAATTCTGCAGCAGCCGGAATTGAGAAGAGATGCATCGGTTCAAGGATCAGATCAACGAAATCGATGA

Coding sequence (CDS)

ATGCCATCGAGTCCGCCGCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCGTGGTCAATCTCGACCATCGCCATCGTCTGCATAGTCTTTCTACTGTTGAGCAACTATAGACTTTTGAAACATCTGTTCCGTGTGTTTCATGGACTGATTTCCGGTCGACCTAGGGTCCAATTTGAGGAAAACCCTAATGGTCCTTCTCTGCAAGTCCATGGACATGGATTGGAGGCCTCCATGATTCGTTTGCTACCTATATCACAGTTCAAAAAGAATGAAGAATCCGAATCAACGGCAAGCTTCAATACGGAATGCGCTGTTTGTTTGGGTGAATTCGAAGAAGGGGAATTGATTAAACACTTACCGAATTGCAATCATTCGTTTCATAGTTGTTGCATCGACGCCTGGTTTCGTGATCATTCGAGTTGCCCTCTCTGCAGATTGCAAGTCTTGAGTTTCTCCACTCGCGATTCTTCTTCGGCAATGATGGAGACGCTTAGAGGAGAAAACGCCCTACGAGAAAGAGTAGCGCATTATGAAACGATTCGTGCTCAAATTCTGCAGCAGCCGGAATTGAGAAGAGATGCATCGGTTCAAGGATCAGATCAACGAAATCGATGA

Protein sequence

MPSSPPPPSPVPDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGLISGRPRVQFEENPNGPSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEEGELIKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQVLSFSTRDSSSAMMETLRGENALRERVAHYETIRAQILQQPELRRDASVQGSDQRNR

Homology

[Close]

BLAST of Bhi10G000535 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 5.8e-19
Identity = 59/167 (35.33%), Postives = 85/167 (50.90%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIAIVCIVFLLLSNYRLL-KHLFRVFHGLISGRPR 64
           PPPPS   D       SS+SP  I+ I I+    +L+S Y L+ K+  R  H   S    
Sbjct: 36  PPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHR--HHQTSSSET 95

Query: 65  VQFEENPNG-----PSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEF 124
           +    N  G       +  +G GL  SMI+ + + ++K  +         ++C+VCL EF
Sbjct: 96  LNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD----GSDCSVCLSEF 155

Query: 125 EEGELIKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQVLSFSTRDSS 160
           EE E ++ LP CNH+FH  CID W + HS+CPLCR  V   +   +S
Sbjct: 156 EENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTAS 196

[Close]

BLAST of Bhi10G000535 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 6.4e-18
Identity = 65/195 (33.33%), Postives = 100/195 (51.28%), Query Frame = 0


Query: 5   PPPPSPV-----PDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGL-ISGRPRV 64
           PPPP P+        +S+   +++ I I+   FLL+S Y  +      +H + I GR  +
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 65  -QFEENPNGP----SLQVHGHGLEASMIRLLPISQFKK----------NEESESTASFNT 124
            +   N   P    S ++   GL+ S+IR +PI +FKK           E  E     + 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 125 ECAVCLGEFEEGELIKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQV---LSF-----ST 171
           EC+VCL EF++ E ++ +PNC+H FH  CID W +++++CPLCR +V    SF     S 
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSA 196

[Close]

BLAST of Bhi10G000535 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-17
Identity = 44/94 (46.81%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 71  VHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEEGELIKHLPNCNHSFHS 130
           V   GL+ ++I+ LP+  F     S+ T     ECAVCL EFEE E  + LPNC H+FH 
Sbjct: 90  VASRGLDPNVIKSLPVFTF-----SDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHV 149

Query: 131 CCIDAWFRDHSSCPLCRLQVLSFSTRDSSSAMME 165
            CID WF  HS+CPLCR  V S +  +S++A  E
Sbjct: 150 DCIDMWFHSHSTCPLCRSLVESLAGIESTAAARE 178

[Close]

BLAST of Bhi10G000535 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 2.4e-17
Identity = 57/168 (33.93%), Postives = 85/168 (50.60%), Query Frame = 0


Query: 6   PPPSPVPDYSSWSP--------------WSISTIAIVCIVFLLLSNYRLLKHLFRVFHGL 65
           PPP P P  +  SP               +I+ I I+   FLL+S Y  +      +H +
Sbjct: 16  PPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQI 75

Query: 66  -ISGRPRVQFEENPNGPSLQVH-----GHGLEASMIRLLPISQFKKNE---ESESTASFN 125
            I  R R   ++NP    L ++       GL+ S IR +P+ +FKK +     E  +  +
Sbjct: 76  DIFRRRRRSSDQNP----LMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNS 135

Query: 126 TECAVCLGEFEEGELIKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQV 151
            EC+VCL EF+E E ++ +PNC H FH  CID W + +++CPLCR  V
Sbjct: 136 QECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179

[Close]

BLAST of Bhi10G000535 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 5.5e-17
Identity = 58/175 (33.14%), Postives = 89/175 (50.86%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIAIVCIVFLLLSNYRLL-KHLFRVFHGLISGRP- 64
           PPPPS   D       S +SP  I+ I I+   F+L+S Y L+ K+  R  H   S    
Sbjct: 38  PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA 97

Query: 65  ---RVQFE--------------ENPNGPSLQVHGHGLEASMIRLLPISQFKKNEESESTA 124
              R+  +               NPN       G GL+ S+I+ + + +++K +      
Sbjct: 98  AINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVE-- 157

Query: 125 SFNTECAVCLGEFEEGELIKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQVLSFS 155
             +++C+VCL EF+E E ++ LP CNH+FH  CID W + HS+CPLCR  +++ S
Sbjct: 158 --SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSS 208

[Close]

BLAST of Bhi10G000535 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.2e-18
Identity = 59/167 (35.33%), Postives = 85/167 (50.90%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIAIVCIVFLLLSNYRLL-KHLFRVFHGLISGRPR 64
           PPPPS   D       SS+SP  I+ I I+    +L+S Y L+ K+  R  H   S    
Sbjct: 36  PPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHR--HHQTSSSET 95

Query: 65  VQFEENPNG-----PSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEF 124
           +    N  G       +  +G GL  SMI+ + + ++K  +         ++C+VCL EF
Sbjct: 96  LNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD----GSDCSVCLSEF 155

Query: 125 EEGELIKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQVLSFSTRDSS 160
           EE E ++ LP CNH+FH  CID W + HS+CPLCR  V   +   +S
Sbjct: 156 EENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTAS 196

[Close]

BLAST of Bhi10G000535 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.1e-17
Identity = 65/195 (33.33%), Postives = 100/195 (51.28%), Query Frame = 0


Query: 5   PPPPSPV-----PDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGL-ISGRPRV 64
           PPPP P+        +S+   +++ I I+   FLL+S Y  +      +H + I GR  +
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 65  -QFEENPNGP----SLQVHGHGLEASMIRLLPISQFKK----------NEESESTASFNT 124
            +   N   P    S ++   GL+ S+IR +PI +FKK           E  E     + 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 125 ECAVCLGEFEEGELIKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQV---LSF-----ST 171
           EC+VCL EF++ E ++ +PNC+H FH  CID W +++++CPLCR +V    SF     S 
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSA 196

[Close]

BLAST of Bhi10G000535 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-16
Identity = 44/94 (46.81%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 71  VHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEEGELIKHLPNCNHSFHS 130
           V   GL+ ++I+ LP+  F     S+ T     ECAVCL EFEE E  + LPNC H+FH 
Sbjct: 90  VASRGLDPNVIKSLPVFTF-----SDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHV 149

Query: 131 CCIDAWFRDHSSCPLCRLQVLSFSTRDSSSAMME 165
            CID WF  HS+CPLCR  V S +  +S++A  E
Sbjct: 150 DCIDMWFHSHSTCPLCRSLVESLAGIESTAAARE 178

[Close]

BLAST of Bhi10G000535 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.4e-16
Identity = 57/168 (33.93%), Postives = 85/168 (50.60%), Query Frame = 0


Query: 6   PPPSPVPDYSSWSP--------------WSISTIAIVCIVFLLLSNYRLLKHLFRVFHGL 65
           PPP P P  +  SP               +I+ I I+   FLL+S Y  +      +H +
Sbjct: 16  PPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQI 75

Query: 66  -ISGRPRVQFEENPNGPSLQVH-----GHGLEASMIRLLPISQFKKNE---ESESTASFN 125
            I  R R   ++NP    L ++       GL+ S IR +P+ +FKK +     E  +  +
Sbjct: 76  DIFRRRRRSSDQNP----LMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNS 135

Query: 126 TECAVCLGEFEEGELIKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQV 151
            EC+VCL EF+E E ++ +PNC H FH  CID W + +++CPLCR  V
Sbjct: 136 QECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179

[Close]

BLAST of Bhi10G000535 vs. ExPASy Swiss-Prot
Match: Q8LF65 (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 4.5e-16
Identity = 43/86 (50.00%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 75  GLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEEGELIKHLPNCNHSFHSCCID 134
           GL  S+I+ LPI  F     S  TA F  EC+VCL EF++ E  + +PNC H+FH  CID
Sbjct: 51  GLNPSIIKSLPIFTF-----SAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCID 110

Query: 135 AWFRDHSSCPLCRLQVLSFSTRDSSS 161
            WF  HSSCPLCR Q+  F+    SS
Sbjct: 111 MWFHSHSSCPLCRSQIEPFAGGVKSS 131

[Close]

BLAST of Bhi10G000535 vs. NCBI nr
Match: XP_031743630.1 (RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN47355.1 hypothetical protein Csa_023057 [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97
Identity = 181/207 (87.44%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGLISGRPRVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTI +VCIVFLLLSNYRLLK L RV HGL +GRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60

Query: 61  EENPNGPSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEEGELIKH 120
           EENPN PSLQ+HGHGLE SMIRLLPISQFKKNEESEST SFNTECAVCLGEFEEGELIKH
Sbjct: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120

Query: 121 LPNCNHSFHSCCIDAWFRDHSSCPLCRLQVLSFSTRD-SSSAMMETLRGENALRERVAHY 180
           LPNCNHSFHS CIDAWFR+HSSCPLCRLQVLSFST D SSSAM+ETL  EN LRERVAHY
Sbjct: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSSAMLETLGRENVLRERVAHY 180

Query: 181 ETIRAQILQQPELRRDASVQGSDQRNR 207
           +T+RAQILQ PE RRDAS+QG+DQRNR
Sbjct: 181 QTLRAQILQHPEFRRDASIQGTDQRNR 207

[Close]

BLAST of Bhi10G000535 vs. NCBI nr
Match: XP_008448367.1 (PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >KAA0061954.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa] >TYK23976.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 357.5 bits (916), Expect = 8.0e-95
Identity = 175/205 (85.37%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGLISGRPRVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTI IVC++FLLLSNYRLLK L RV H L SGRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNGPSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEEGELIKH 120
           EENPN PSLQ+H HGLE SMIRLLPISQFKK EESEST SFNTECAVCLGEFEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSCCIDAWFRDHSSCPLCRLQVLSFSTRDSSSAMMETLRGENALRERVAHYE 180
           LPNCNHSFHS CIDAWFRDHSSCPLCRLQV SFST DSSSAM+ETL  EN LRERVAHY+
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TIRAQILQQPELRRDASVQGSDQRN 206
           T+RAQILQ PE RRD S+QGSDQR+
Sbjct: 181 TLRAQILQHPEFRRDESIQGSDQRD 205

[Close]

BLAST of Bhi10G000535 vs. NCBI nr
Match: XP_023512261.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.9 bits (821), Expect = 8.3e-84
Identity = 167/213 (78.40%), Postives = 180/213 (84.51%), Query Frame = 0


Query: 1   MPSS---PPPPSPVPDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGLISGRPR 60
           MPSS   PPPPSPVPDYSSWSPWSIS IAIVCIV LLLSNYR+LK   RVFHGL  GR  
Sbjct: 1   MPSSPPPPPPPSPVPDYSSWSPWSISIIAIVCIVVLLLSNYRILKRWCRVFHGLFCGRSV 60

Query: 61  VQFEENPNGPSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEEGEL 120
           VQF+ENPN PS QVH HGLEAS IRLLPISQFKKNEE+ESTAS NTECAVCLGEFEEGEL
Sbjct: 61  VQFDENPNDPSPQVHVHGLEASTIRLLPISQFKKNEEAESTASINTECAVCLGEFEEGEL 120

Query: 121 IKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQVLSFS----TRDSSSAMMETLRGENALR 180
           IK+LPNCNHSFHS CIDAW R+HSSCPLCRL V + S    T DSSSAM+ETL  E+   
Sbjct: 121 IKNLPNCNHSFHSSCIDAWLRNHSSCPLCRLHVSNLSIDCPTPDSSSAMLETLSREDVDG 180

Query: 181 ERVAHYETIRAQILQQPELRRDASVQGSDQRNR 207
           ERV++Y+T+RAQILQ P+LRRDASVQGSDQRNR
Sbjct: 181 ERVSYYQTLRAQILQNPDLRRDASVQGSDQRNR 213

[Close]

BLAST of Bhi10G000535 vs. NCBI nr
Match: KAG6570731.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010575.1 RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.1 bits (819), Expect = 1.4e-83
Identity = 167/213 (78.40%), Postives = 180/213 (84.51%), Query Frame = 0


Query: 1   MPSS---PPPPSPVPDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGLISGRPR 60
           MPSS   PPPPSPVPDYSSWSPWSIS IAIVCIV LLLSNYR+LK   RV HGL  GR  
Sbjct: 1   MPSSPPPPPPPSPVPDYSSWSPWSISIIAIVCIVVLLLSNYRILKRWCRVLHGLFCGRFV 60

Query: 61  VQFEENPNGPSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEEGEL 120
           VQF+ENPN PS +VH HGLEAS IRLLPISQFKKNEE+ESTAS NTECAVCLGEFEEGEL
Sbjct: 61  VQFDENPNDPSPEVHVHGLEASTIRLLPISQFKKNEEAESTASINTECAVCLGEFEEGEL 120

Query: 121 IKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQVLSFS----TRDSSSAMMETLRGENALR 180
           IK+LPNCNHSFHS CIDAW R+HSSCPLCRL V + S    T DSSSAM+ETL  E+  R
Sbjct: 121 IKNLPNCNHSFHSSCIDAWLRNHSSCPLCRLHVSNLSIDCPTPDSSSAMLETLGREDVER 180

Query: 181 ERVAHYETIRAQILQQPELRRDASVQGSDQRNR 207
           ERV++Y+T+RAQILQ PELRRDASVQGSDQRNR
Sbjct: 181 ERVSYYQTLRAQILQNPELRRDASVQGSDQRNR 213

[Close]

BLAST of Bhi10G000535 vs. NCBI nr
Match: KAF3453818.1 (hypothetical protein FNV43_RR04259 [Rhamnella rubrinervis])

HSP 1 Score: 169.1 bits (427), Expect = 4.0e-38
Identity = 88/196 (44.90%), Postives = 124/196 (63.27%), Query Frame = 0


Query: 9   SPVPDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGLISGRPRVQFEENPNGPS 68
           SP+P  S W+PW+I+++A V I+ LLLS +R+L+     F         +  E N + PS
Sbjct: 305 SPLPVPSHWNPWAIASVATVSIIILLLSYFRILQSFCCNFSSRNQAGSLLLSETNLDDPS 364

Query: 69  LQVHGHGLEASMIRLLPISQFK-KNEESESTASFNTECAVCLGEFEEGELIKHLPNCNHS 128
           LQ H HGLE S+I  LPI+QFK +N  S+     +T+CAVCLGEF+EGE ++ LPNC H+
Sbjct: 365 LQFHSHGLEVSLIHSLPITQFKEENGGSKMGHQTSTDCAVCLGEFQEGEWLRFLPNCKHA 424

Query: 129 FHSCCIDAWFRDHSSCPLCRLQVLSFSTRD-----SSSAMMETLRGENALRERVAHYETI 188
           FH  CID WF  HS+CPLCR +V  F+  D     S   ++ETLR E+  +ER AHY+ +
Sbjct: 425 FHISCIDTWFLSHSTCPLCRSEVNGFAFEDHEYPVSMYTLLETLRREDFFQERAAHYQFL 484

Query: 189 RAQILQQPELRRDASV 199
           ++ IL     R ++S+
Sbjct: 485 QSTILNNSVARTESSL 500

[Close]

BLAST of Bhi10G000535 vs. ExPASy TrEMBL
Match: A0A0A0KCA5 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G303210 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.4e-98
Identity = 181/207 (87.44%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGLISGRPRVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTI +VCIVFLLLSNYRLLK L RV HGL +GRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60

Query: 61  EENPNGPSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEEGELIKH 120
           EENPN PSLQ+HGHGLE SMIRLLPISQFKKNEESEST SFNTECAVCLGEFEEGELIKH
Sbjct: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120

Query: 121 LPNCNHSFHSCCIDAWFRDHSSCPLCRLQVLSFSTRD-SSSAMMETLRGENALRERVAHY 180
           LPNCNHSFHS CIDAWFR+HSSCPLCRLQVLSFST D SSSAM+ETL  EN LRERVAHY
Sbjct: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSSAMLETLGRENVLRERVAHY 180

Query: 181 ETIRAQILQQPELRRDASVQGSDQRNR 207
           +T+RAQILQ PE RRDAS+QG+DQRNR
Sbjct: 181 QTLRAQILQHPEFRRDASIQGTDQRNR 207

[Close]

BLAST of Bhi10G000535 vs. ExPASy TrEMBL
Match: A0A5A7V3S2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00390 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.9e-95
Identity = 175/205 (85.37%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGLISGRPRVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTI IVC++FLLLSNYRLLK L RV H L SGRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNGPSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEEGELIKH 120
           EENPN PSLQ+H HGLE SMIRLLPISQFKK EESEST SFNTECAVCLGEFEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSCCIDAWFRDHSSCPLCRLQVLSFSTRDSSSAMMETLRGENALRERVAHYE 180
           LPNCNHSFHS CIDAWFRDHSSCPLCRLQV SFST DSSSAM+ETL  EN LRERVAHY+
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TIRAQILQQPELRRDASVQGSDQRN 206
           T+RAQILQ PE RRD S+QGSDQR+
Sbjct: 181 TLRAQILQHPEFRRDESIQGSDQRD 205

[Close]

BLAST of Bhi10G000535 vs. ExPASy TrEMBL
Match: A0A1S3BIX6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103490579 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.9e-95
Identity = 175/205 (85.37%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGLISGRPRVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTI IVC++FLLLSNYRLLK L RV H L SGRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNGPSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEEGELIKH 120
           EENPN PSLQ+H HGLE SMIRLLPISQFKK EESEST SFNTECAVCLGEFEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSCCIDAWFRDHSSCPLCRLQVLSFSTRDSSSAMMETLRGENALRERVAHYE 180
           LPNCNHSFHS CIDAWFRDHSSCPLCRLQV SFST DSSSAM+ETL  EN LRERVAHY+
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TIRAQILQQPELRRDASVQGSDQRN 206
           T+RAQILQ PE RRD S+QGSDQR+
Sbjct: 181 TLRAQILQHPEFRRDESIQGSDQRD 205

[Close]

BLAST of Bhi10G000535 vs. ExPASy TrEMBL
Match: A0A2C9W1B6 (RING-type E3 ubiquitin transferase OS=Manihot esculenta OX=3983 GN=MANES_04G030200 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 8.2e-37
Identity = 91/196 (46.43%), Postives = 120/196 (61.22%), Query Frame = 0


Query: 1   MPSSPPPPSP--VPDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGLISGRPRV 60
           MP SP P +P  + +YS W+ + I  +  VC   +L S YR+L+ L    +     R R 
Sbjct: 1   MPPSPTPEAPLRLENYSQWNAYVIGPVIAVCSSVVLFSYYRMLRRLCCTLNTQTLPRNRA 60

Query: 61  QF----EENPNGPSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEE 120
           Q     + N    SLQ + HGLE++++R LPISQFKK EESE++   N ECAVCLGEFEE
Sbjct: 61  QMSRINQNNLEDSSLQNYSHGLESNIMRSLPISQFKKEEESEAS---NRECAVCLGEFEE 120

Query: 121 GELIKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQV--LSFSTRDSSSAMMETLRGENAL 180
           GE +KHLPNC H FH  CID WF+ HS+CPLCR  V  L      S   ++ TLR E+  
Sbjct: 121 GEWLKHLPNCAHVFHVACIDTWFQTHSNCPLCRSHVYDLCHEYSISMDTLLHTLRREDFF 180

Query: 181 RERVAHYETIRAQILQ 189
            ER  HY+ +R++IL+
Sbjct: 181 NERAEHYQNLRSEILR 193

[Close]

BLAST of Bhi10G000535 vs. ExPASy TrEMBL
Match: A0A6A6KKG1 (RING-type E3 ubiquitin transferase OS=Hevea brasiliensis OX=3981 GN=GH714_013318 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.8e-36
Identity = 94/198 (47.47%), Postives = 120/198 (60.61%), Query Frame = 0


Query: 1   MPSSPPPPS--PVPDYSSWSPWSISTIAIVCIVFLLLSNYRLLKHLFRVFHGLISGRPRV 60
           MP SP P +   + +   W+P+ I  +  VC   ++ S YR+LK L    + L   R R 
Sbjct: 1   MPLSPTPAAQHQLENSPEWNPYVIGPVVAVCTFIVMFSYYRILKRLCCSLNTLTFSRNRF 60

Query: 61  QF----EENPNGPSLQVHGHGLEASMIRLLPISQFKKNEESESTASFNTECAVCLGEFEE 120
           Q     E +    SLQ   HGLE++++  LPISQFKK +E ES  S N+ECAVCLGEFEE
Sbjct: 61  QMRRIGENSLGDSSLQYFSHGLESAIMCSLPISQFKKEKEEESRTS-NSECAVCLGEFEE 120

Query: 121 GELIKHLPNCNHSFHSCCIDAWFRDHSSCPLCRLQV--LSFSTRDSSSAMMETLRGENAL 180
           GE +KHLP C H FH  CID WF+ HS+CPLCR QV  LS     S S ++ETLR E+ L
Sbjct: 121 GEWLKHLPICAHVFHVACIDTWFQTHSNCPLCRSQVYDLSHEYSISVSILLETLRREDFL 180

Query: 181 RERVAHYETIRAQILQQP 191
            ER  HY+ +R +IL  P
Sbjct: 181 HERAKHYQILRPEILGNP 197

The following BLAST results are available for this feature:

BLAST of Bhi10G000535 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17600.1	5.8e-19	35.33	RING/U-box superfamily protein	[more]
AT5G43420.1	6.4e-18	33.33	RING/U-box superfamily protein	[more]
AT3G16720.1	1.1e-17	46.81	TOXICOS EN LEVADURA 2	[more]
AT1G04360.1	2.4e-17	33.93	RING/U-box superfamily protein	[more]
AT3G03550.1	5.5e-17	33.14	RING/U-box superfamily protein	[more]

BLAST of Bhi10G000535 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF64	8.2e-18	35.33	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9LSW9	9.1e-17	33.33	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
Q8L9T5	1.5e-16	46.81	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
P93823	3.4e-16	33.93	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q8LF65	4.5e-16	50.00	RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2	[more]

BLAST of Bhi10G000535 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743630.1	1.3e-97	87.44	RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN47355.1 hypothetical pro...	[more]
XP_008448367.1	8.0e-95	85.37	PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >KAA0061954.1 RING-H...	[more]
XP_023512261.1	8.3e-84	78.40	RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]	[more]
KAG6570731.1	1.4e-83	78.40	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
KAF3453818.1	4.0e-38	44.90	hypothetical protein FNV43_RR04259 [Rhamnella rubrinervis]	[more]

BLAST of Bhi10G000535 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCA5	6.4e-98	87.44	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G303210 PE...	[more]
A0A5A7V3S2	3.9e-95	85.37	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BIX6	3.9e-95	85.37	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103490579 PE=3 ...	[more]
A0A2C9W1B6	8.2e-37	46.43	RING-type E3 ubiquitin transferase OS=Manihot esculenta OX=3983 GN=MANES_04G0302...	[more]
A0A6A6KKG1	1.8e-36	47.47	RING-type E3 ubiquitin transferase OS=Hevea brasiliensis OX=3981 GN=GH714_013318...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 105..146 e-value: 3.6E-5 score: 33.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 104..147 e-value: 2.3E-11 score: 43.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 105..147 score: 12.149959
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 67..151 e-value: 3.9E-20 score: 73.3
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 14..159
None	No IPR available	PANTHER	PTHR45676:SF107	RING/U-BOX SUPERFAMILY PROTEIN	coord: 14..159
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 104..147 e-value: 3.59208E-16 score: 67.3269
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 104..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000535	Bhi10M000535	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane