Bhi10G000400 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G000400
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr10: 10730973 .. 10731209 (-)
RNA-Seq Expression	Bhi10G000400
Synteny	Bhi10G000400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTATCAGTCGCTCATCTATCGGCGGATGCTTCGCAATGCATTGCTTGCTTTCCAGTTCGCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGGTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGGACCTTCATCTGTGTTCCTTCTCCCGGTTCCTTCTACTATTACTCCTCCTCTTCCTCGGACTCCGATAGTTCTTACTACTATGCTTCCGACTGA

mRNA sequence

ATGGTGTTATCAGTCGCTCATCTATCGGCGGATGCTTCGCAATGCATTGCTTGCTTTCCAGTTCGCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGGTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGGACCTTCATCTGTGTTCCTTCTCCCGGTTCCTTCTACTATTACTCCTCCTCTTCCTCGGACTCCGATAGTTCTTACTACTATGCTTCCGACTGA

Coding sequence (CDS)

ATGGTGTTATCAGTCGCTCATCTATCGGCGGATGCTTCGCAATGCATTGCTTGCTTTCCAGTTCGCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGGTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGGACCTTCATCTGTGTTCCTTCTCCCGGTTCCTTCTACTATTACTCCTCCTCTTCCTCGGACTCCGATAGTTCTTACTACTATGCTTCCGACTGA

Protein sequence

MVLSVAHLSADASQCIACFPVRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSFYYYSSSSSDSDSSYYYASD

Homology

[Close]

BLAST of Bhi10G000400 vs. TAIR 10
Match: AT1G55365.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13500.1); Has 29 Blast hits to 29 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 3.3e-07
Identity = 37/86 (43.02%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 1  MVLSVAHLSADASQCIACFP--VRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGS 60
          MV++VA +S D  Q I   P   R+ + QL  +   FP+ QLSR  L LWTF+C+PS  S
Sbjct: 7  MVMAVAEVSTDTWQLIWRVPSSQRIDTEQLFDIAVCFPIHQLSRFVLCLWTFMCLPSSDS 66

Query: 61 FYYY------SSSSSDSDSSYYYASD 79
          FY Y      +SSSS++D     A D
Sbjct: 67 FYSYTYETLSASSSSEADDDDRLAFD 92

[Close]

BLAST of Bhi10G000400 vs. TAIR 10
Match: AT5G56520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 4.3e-07
Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 2  VLSVAHLSADASQCIACFPV--RLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSF 61
          V+SVAH+SA+  Q +   P   R++S ++L L+  FPLQQL R  L  W +ICVP P   
Sbjct: 8  VVSVAHISAEIFQRLRWIPPSDRISSGEMLQLVCCFPLQQLGRFVLWFWNYICVPPPEIL 67

Query: 62 YY----------YSSSSSDSDSSYYY 76
          Y+          Y SSSS S+ ++++
Sbjct: 68 YFDGRRDDDDDGYGSSSSSSNVTHHH 93

[Close]

BLAST of Bhi10G000400 vs. NCBI nr
Match: XP_022153861.1 (uncharacterized protein LOC111021275 [Momordica charantia] >XP_022153863.1 uncharacterized protein LOC111021275 [Momordica charantia] >XP_022153864.1 uncharacterized protein LOC111021275 [Momordica charantia])

HSP 1 Score: 118.2 bits (295), Expect = 3.1e-23
Identity = 64/77 (83.12%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 1  MVLSVAHLSADASQCIACFPVRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSFY 60
          +VLSVAHLSADASQCIACFP RLTSHQLLYLLFGFPLQQLSRLALS WTF CVP PGSFY
Sbjct: 7  IVLSVAHLSADASQCIACFPDRLTSHQLLYLLFGFPLQQLSRLALSFWTFFCVPPPGSFY 66

Query: 61 YYSSSSSDSDSSYYYAS 78
          YY   SSDSD+S +  S
Sbjct: 67 YY-YYSSDSDASSFSLS 82

[Close]

BLAST of Bhi10G000400 vs. NCBI nr
Match: KAA0040112.1 (hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa] >TYK21737.1 hypothetical protein E5676_scaffold859G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 2.9e-21
Identity = 62/78 (79.49%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 1   MVLSVAHLSADASQCIACFPVRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSFY 60
           +VLSVAHLSAD SQ IA FP  LTSHQLLYLLF FPLQQLSRLALSLWTF CVP PGSFY
Sbjct: 45  IVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPGSFY 104

Query: 61  YYSSSSSDSDSSYYYASD 79
           YY  SS    SSY YASD
Sbjct: 105 YYYYSSDSDLSSYAYASD 122

[Close]

BLAST of Bhi10G000400 vs. NCBI nr
Match: XP_022958637.1 (uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_022958638.1 uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_022958640.1 uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_023533512.1 uncharacterized protein LOC111795367 [Cucurbita pepo subsp. pepo] >KAG7035790.1 hypothetical protein SDJN02_02588, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.5 bits (267), Expect = 5.4e-20
Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MVLSVAHLSADASQCIACFPVRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSFY 60
          +VLSVAHLSADASQCIA  P RLTSHQLLY+LF +PLQQLSRLALS+WTF+CVP PGSFY
Sbjct: 7  IVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFY 66

Query: 61 YYSSSSSDSDSS 73
          YY   SSD DSS
Sbjct: 67 YY-YYSSDYDSS 77

[Close]

BLAST of Bhi10G000400 vs. NCBI nr
Match: PON98040.1 (hypothetical protein TorRG33x02_061140 [Trema orientale])

HSP 1 Score: 99.8 bits (247), Expect = 1.1e-17
Identity = 53/73 (72.60%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 1  MVLSVAHLSADASQCIACFPVRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSFY 60
          +VLSVAH+SADA QC+ACFP RL+SHQLL L+F FPLQQL RLAL LWTF+C+P P SFY
Sbjct: 7  LVLSVAHVSADAWQCLACFPERLSSHQLLDLVFCFPLQQLGRLALCLWTFLCLPPPDSFY 66

Query: 61 YYS-SSSSDSDSS 73
           Y+ SS SD DSS
Sbjct: 67 SYAYSSDSDDDSS 79

[Close]

BLAST of Bhi10G000400 vs. NCBI nr
Match: KAF3966134.1 (hypothetical protein CMV_009733 [Castanea mollissima])

HSP 1 Score: 97.4 bits (241), Expect = 5.6e-17
Identity = 54/73 (73.97%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1  MVLSVAHLSADASQCIACFPVRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSFY 60
          MVLSVAHLSADA QCIAC P RL+SHQLL L+  FPLQQL RLAL LWTF+C+P P SFY
Sbjct: 7  MVLSVAHLSADAWQCIACNPERLSSHQLLDLICCFPLQQLGRLALCLWTFLCLPPPDSFY 66

Query: 61 ---YYSSSSSDSD 71
             YYSSSSS  D
Sbjct: 67 SYAYYSSSSSSDD 79

[Close]

BLAST of Bhi10G000400 vs. ExPASy TrEMBL
Match: A0A6J1DKC2 (uncharacterized protein LOC111021275 OS=Momordica charantia OX=3673 GN=LOC111021275 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23
Identity = 64/77 (83.12%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 1  MVLSVAHLSADASQCIACFPVRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSFY 60
          +VLSVAHLSADASQCIACFP RLTSHQLLYLLFGFPLQQLSRLALS WTF CVP PGSFY
Sbjct: 7  IVLSVAHLSADASQCIACFPDRLTSHQLLYLLFGFPLQQLSRLALSFWTFFCVPPPGSFY 66

Query: 61 YYSSSSSDSDSSYYYAS 78
          YY   SSDSD+S +  S
Sbjct: 67 YY-YYSSDSDASSFSLS 82

[Close]

BLAST of Bhi10G000400 vs. ExPASy TrEMBL
Match: A0A5A7T9K4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001090 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21
Identity = 62/78 (79.49%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 1   MVLSVAHLSADASQCIACFPVRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSFY 60
           +VLSVAHLSAD SQ IA FP  LTSHQLLYLLF FPLQQLSRLALSLWTF CVP PGSFY
Sbjct: 45  IVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPGSFY 104

Query: 61  YYSSSSSDSDSSYYYASD 79
           YY  SS    SSY YASD
Sbjct: 105 YYYYSSDSDLSSYAYASD 122

[Close]

BLAST of Bhi10G000400 vs. ExPASy TrEMBL
Match: A0A0A0L0B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268060 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.1e-21
Identity = 62/78 (79.49%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 1   MVLSVAHLSADASQCIACFPVRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSFY 60
           +VLSVAHLSADASQ IA FP  LTSHQLLYLLF FPLQQLSRLALSLWT  CVP PGSFY
Sbjct: 63  IVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFY 122

Query: 61  YYSSSSSDSDSSYYYASD 79
           YY  SS    SSY YASD
Sbjct: 123 YYYYSSDSDLSSYDYASD 140

[Close]

BLAST of Bhi10G000400 vs. ExPASy TrEMBL
Match: A0A6J1H2D5 (uncharacterized protein LOC111459803 OS=Cucurbita moschata OX=3662 GN=LOC111459803 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-20
Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MVLSVAHLSADASQCIACFPVRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSFY 60
          +VLSVAHLSADASQCIA  P RLTSHQLLY+LF +PLQQLSRLALS+WTF+CVP PGSFY
Sbjct: 7  IVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFY 66

Query: 61 YYSSSSSDSDSS 73
          YY   SSD DSS
Sbjct: 67 YY-YYSSDYDSS 77

[Close]

BLAST of Bhi10G000400 vs. ExPASy TrEMBL
Match: A0A2P5FJR7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_061140 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.5e-18
Identity = 53/73 (72.60%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 1  MVLSVAHLSADASQCIACFPVRLTSHQLLYLLFGFPLQQLSRLALSLWTFICVPSPGSFY 60
          +VLSVAH+SADA QC+ACFP RL+SHQLL L+F FPLQQL RLAL LWTF+C+P P SFY
Sbjct: 7  LVLSVAHVSADAWQCLACFPERLSSHQLLDLVFCFPLQQLGRLALCLWTFLCLPPPDSFY 66

Query: 61 YYS-SSSSDSDSS 73
           Y+ SS SD DSS
Sbjct: 67 SYAYSSDSDDDSS 79

The following BLAST results are available for this feature:

BLAST of Bhi10G000400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55365.1	3.3e-07	43.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G56520.1	4.3e-07	39.53	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

BLAST of Bhi10G000400 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi10G000400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153861.1	3.1e-23	83.12	uncharacterized protein LOC111021275 [Momordica charantia] >XP_022153863.1 uncha...	[more]
KAA0040112.1	2.9e-21	79.49	hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa] >TYK2173...	[more]
XP_022958637.1	5.4e-20	80.56	uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_022958638.1 unchar...	[more]
PON98040.1	1.1e-17	72.60	hypothetical protein TorRG33x02_061140 [Trema orientale]	[more]
KAF3966134.1	5.6e-17	73.97	hypothetical protein CMV_009733 [Castanea mollissima]	[more]

BLAST of Bhi10G000400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKC2	1.5e-23	83.12	uncharacterized protein LOC111021275 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A5A7T9K4	1.4e-21	79.49	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L0B8	3.1e-21	79.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268060 PE=4 SV=1	[more]
A0A6J1H2D5	2.6e-20	80.56	uncharacterized protein LOC111459803 OS=Cucurbita moschata OX=3662 GN=LOC1114598...	[more]
A0A2P5FJR7	5.5e-18	72.60	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_061140 PE=4 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35104:SF6	OS03G0807000 PROTEIN	coord: 1..71
None	No IPR available	PANTHER	PTHR35104	OS03G0807000 PROTEIN	coord: 1..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000400	Bhi10M000400	mRNA