Bhi10G000232 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G000232
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	chaperonin-like RbcX protein 2, chloroplastic
Location	chr10: 6666813 .. 6669401 (+)
RNA-Seq Expression	Bhi10G000232
Synteny	Bhi10G000232

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAGTTGACATGCATATTTTGGGGAAAAAGAAAAAAGAAAGAAAAATGAAATTAACAACGACAAACTTAAAAAATATGAAACCTTCTTTCATCTGTTTCTTGTACAATTCCAAATTGAATTCTCAAAGTTTAAGTTTGTCACGGTAGCTGAATCTTTGACCCAATCTCCCCTATTCTCCAAAACCCATTTCCACTTCTTCTTTATATTCACTTTATTCTCATTCCTTTATTGCCACTCCTTAAATCCTGCTTCTCTTCACGGTTGTGATCCTTTCAATCTTTTTCCAAAATGGTGGGAGCTTTGTTTGTTGTTGGTGCGCCGGTCGTCGACTCGCCGCCGTGTCCGTCTTTGTGTTCGGACTCATCGCCGGTTACCATTACGAGTCTTAGAAGTGGTGGGGATTTGGTTTTGCAAAGGAAATCGAGTCATTTGGCCGTGTCTAAGTCGGTGGATTTGAGAAGTTCGTTTGTCAATTCCGCCGGTGAGTGGCGGCTCTCGGCCAGTGGTGGTAACCGGAGTCGGAGGAACCAACGGAGGAACCGGAGGCTTGTTGTTGTCAATGAATTTGCTGGGCAGTATGAGGACAGTTTTGATGATGTGAAAATGGTATGGATATGATGACTCTCTTCTTCAATGCAAAAATGCAAAATGATCCGTCCCGTTTGGTAACAATTTCGTTTTTTATTTTTTGTTTTTGAAAATTAAGCCTATTTAAATAGGCTAAACGGGACAATTTCGTTTTTTATTTTTTGTTTTTGAAAATTAAGCCTATTTAAATAGGCTTAATTTTTAGAAGCCGAAAACAAAAAATGAAATGGTTCTTCGTCTTTTGATTTCCGGTTTTTGATCATTGTTATCAAATGCTTGCCTCTTCTCCTGCTTCCTGAATGATGAATGTTCTTGGCACTTGAATTCTGCATTTAAAAAGGGAAAAAAGAATTATTTTAAGCTCACCAGAAGCTTTCTATTTGCAGCAAATACAGAATTATTTCACATACAAAGCTGTGAAGACAGTTCTGAATCAGCTTTATGAGATGAACCCTACTCAATACAGATGGTTTTATAAGTAAGTGAAGCCTTTCACTTTAGTTTTTAAGAAGTTAATTCATTATGACTGCCAATGTAAATTCTTACTCTCTGGAAATCAAAACAGTGTTTCCAGTACATATCCATTTCCCCACCTAATCTTGAATTTCAATTTTTCTACATCAACAGCTTTGTTGTAAATCACAAGCCTGGGGAAGGGAAGCGTTTCATCCGAACTCTTGTAAAGGTAGTATGGCAATCTCTAGAAATTGTAAGCCTAAATATAACCCACTTGATTAAGACATTATATCGTCAACCAAATTCCCACATAATATGTTAATCTCAAAACGTGAAAAAAAGAGTCTATTTGAATTACATTAAGGATGAGTATATAATTTGAGTACTGAACAATAAGATATTGGATTGTGTATTTGTATGATTAACAGGAGAAGCAAGATTTGGCTGAGAGAGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGGTAAGAACAAACTTGGTATTTAGAGGACAAATTCTTTGTTGGAACCATTATAAGAACACATATTGAATTGTGATTTGGTGTTGTTTCATAGAAATGTGATCACGCTGAAATGTACAAAGAGATATCTGATGAGAACTTGGAGTTGATGCGAGAGCGACTAATGGAGACTGTGATATGGCCTTCCGATGACTAAAGCTTTTAGGAGATTGGCAGACTAGGAGCTAGCAGATTTTTTTTCTTAATTATTTTCCTTTAGTGTCGACCAATCAGGCCATGTTCTTAATTAGTTGTCATTCACATTCATATTATTTTCCACCAACTAATAAGAATTCTTACATCCAATAATATAAAAGTTTTCAATGTAAATACTTTCAACATCTTATACATGTTAAAAGTATCAATCTTATTGGATATGTTGCTATATACAAAAGACATTCTGAAGTTTAGTCCAACCGTATCATATATGTTGTACTTGTACTAATCAAACCTCAAAGATTTCTCATTTCGTACTAATTTAGGTATAACTCAATTAGTTTAAGCATATACCTCTAACTAAAAGTTCATAGTTTCAGGAACCCTTTAATATATTCATATATTGTTGAACTCAATAATAATAATAATAAATTATATTTCACATTCTGTGTCAACACCCTTCCACTTGAAAGACAATCATAATATCTCAATTTCTAAAGCAAAATTATGCAGGTGATATTTACTATCTTCAAGAGAAATTTATGTAGATCCACCATCATAGTCAAGGTGATAAAGGTGGTAATATTTAGTAAAAGGTGTTGGTTCATGGTTGTTGATTTAGAACTCTTTCAGTGATAACTCGAGGAATACATATTTAAAATGGACGTCATATATCTAAATCATAATTTGTACCATCAAGTAGAATGGTTTGTTTATACATGATAAACCAACACACTTGTGAAGGATAATGAGAATTTTTAGTACAAAGTATTCGTACCGGTTCGGTTCTTGGAGCAATCTTGATCTGTTGTTGGAACCAGGCAATTGGCCAATCACACCGTTGGAGATTGCAACGA

mRNA sequence

GGCAGTTGACATGCATATTTTGGGGAAAAAGAAAAAAGAAAGAAAAATGAAATTAACAACGACAAACTTAAAAAATATGAAACCTTCTTTCATCTGTTTCTTGTACAATTCCAAATTGAATTCTCAAAGTTTAAGTTTGTCACGGTAGCTGAATCTTTGACCCAATCTCCCCTATTCTCCAAAACCCATTTCCACTTCTTCTTTATATTCACTTTATTCTCATTCCTTTATTGCCACTCCTTAAATCCTGCTTCTCTTCACGGTTGTGATCCTTTCAATCTTTTTCCAAAATGGTGGGAGCTTTGTTTGTTGTTGGTGCGCCGGTCGTCGACTCGCCGCCGTGTCCGTCTTTGTGTTCGGACTCATCGCCGGTTACCATTACGAGTCTTAGAAGTGGTGGGGATTTGGTTTTGCAAAGGAAATCGAGTCATTTGGCCGTGTCTAAGTCGGTGGATTTGAGAAGTTCGTTTGTCAATTCCGCCGGTGAGTGGCGGCTCTCGGCCAGTGGTGGTAACCGGAGTCGGAGGAACCAACGGAGGAACCGGAGGCTTGTTGTTGTCAATGAATTTGCTGGGCAGTATGAGGACAGTTTTGATGATGTGAAAATGCAAATACAGAATTATTTCACATACAAAGCTGTGAAGACAGTTCTGAATCAGCTTTATGAGATGAACCCTACTCAATACAGATGGTTTTATAACTTTGTTGTAAATCACAAGCCTGGGGAAGGGAAGCGTTTCATCCGAACTCTTGTAAAGGAGAAGCAAGATTTGGCTGAGAGAGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGAAATGTGATCACGCTGAAATGTACAAAGAGATATCTGATGAGAACTTGGAGTTGATGCGAGAGCGACTAATGGAGACTGTGATATGGCCTTCCGATGACTAAAGCTTTTAGGAGATTGGCAGACTAGGAGCTAGCAGATTTTTTTTCTTAATTATTTTCCTTTAGTGTCGACCAATCAGGCCATGTTCTTAATTAGTTGTCATTCACATTCATATTATTTTCCACCAACTAATAAGAATTCTTACATCCAATAATATAAAAGTTTTCAATGTAAATACTTTCAACATCTTATACATGTTAAAAGTATCAATCTTATTGGATATGTTGCTATATACAAAAGACATTCTGAAGTTTAGTCCAACCGTATCATATATGTTGTACTTGTACTAATCAAACCTCAAAGATTTCTCATTTCGTACTAATTTAGGTATAACTCAATTAGTTTAAGCATATACCTCTAACTAAAAGTTCATAGTTTCAGGAACCCTTTAATATATTCATATATTGTTGAACTCAATAATAATAATAATAAATTATATTTCACATTCTGTGTCAACACCCTTCCACTTGAAAGACAATCATAATATCTCAATTTCTAAAGCAAAATTATGCAGGTGATATTTACTATCTTCAAGAGAAATTTATGTAGATCCACCATCATAGTCAAGGTGATAAAGGTGGTAATATTTAGTAAAAGGTGTTGGTTCATGGTTGTTGATTTAGAACTCTTTCAGTGATAACTCGAGGAATACATATTTAAAATGGACGTCATATATCTAAATCATAATTTGTACCATCAAGTAGAATGGTTTGTTTATACATGATAAACCAACACACTTGTGAAGGATAATGAGAATTTTTAGTACAAAGTATTCGTACCGGTTCGGTTCTTGGAGCAATCTTGATCTGTTGTTGGAACCAGGCAATTGGCCAATCACACCGTTGGAGATTGCAACGA

Coding sequence (CDS)

ATGGTGGGAGCTTTGTTTGTTGTTGGTGCGCCGGTCGTCGACTCGCCGCCGTGTCCGTCTTTGTGTTCGGACTCATCGCCGGTTACCATTACGAGTCTTAGAAGTGGTGGGGATTTGGTTTTGCAAAGGAAATCGAGTCATTTGGCCGTGTCTAAGTCGGTGGATTTGAGAAGTTCGTTTGTCAATTCCGCCGGTGAGTGGCGGCTCTCGGCCAGTGGTGGTAACCGGAGTCGGAGGAACCAACGGAGGAACCGGAGGCTTGTTGTTGTCAATGAATTTGCTGGGCAGTATGAGGACAGTTTTGATGATGTGAAAATGCAAATACAGAATTATTTCACATACAAAGCTGTGAAGACAGTTCTGAATCAGCTTTATGAGATGAACCCTACTCAATACAGATGGTTTTATAACTTTGTTGTAAATCACAAGCCTGGGGAAGGGAAGCGTTTCATCCGAACTCTTGTAAAGGAGAAGCAAGATTTGGCTGAGAGAGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGAAATGTGATCACGCTGAAATGTACAAAGAGATATCTGATGAGAACTTGGAGTTGATGCGAGAGCGACTAATGGAGACTGTGATATGGCCTTCCGATGACTAA

Protein sequence

MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKSSHLAVSKSVDLRSSFVNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVKTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVKKCDHAEMYKEISDENLELMRERLMETVIWPSDD

Homology

[Close]

BLAST of Bhi10G000232 vs. TAIR 10
Match: AT5G19855.1 (Chaperonin-like RbcX protein )

HSP 1 Score: 224.6 bits (571), Expect = 7.7e-59
Identity = 120/212 (56.60%), Postives = 154/212 (72.64%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKSSHLAVSKSVDLRSSF 60
           MV A FVVG+PV+DS   P LC D+         + G +   R+   L  +++++L SSF
Sbjct: 1   MVSAWFVVGSPVMDSSSSPCLCLDA--------HTTGTI---RRKKILGKARNLELGSSF 60

Query: 61  VNSAGEWRLSASGGNRSRRNQRRNRRLVVVNE-FAGQYEDSFDDVKMQIQNYFTYKAVKT 120
             S   +RLS      SR   R++++L++VNE  AG Y+D+F DV+ QI NYFTYKAV+T
Sbjct: 61  TGSRIVFRLSPK--RVSRIANRKSKKLLIVNEDVAGNYDDTFGDVQKQIVNYFTYKAVRT 120

Query: 121 VLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVKK 180
           VL+QLYEMNP QY WFYN ++ ++P +GKRF+R L KE Q+LAERVMITRLHLY KW+KK
Sbjct: 121 VLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITRLHLYGKWIKK 180

Query: 181 CDHAEMYKEISDENLELMRERLMETVIWPSDD 212
           CDH ++Y+EISDENL LMRERLMETVIWPSDD
Sbjct: 181 CDHGKIYQEISDENLALMRERLMETVIWPSDD 199

[Close]

BLAST of Bhi10G000232 vs. ExPASy Swiss-Prot
Match: Q8L9X2 (Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCX2 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-57
Identity = 120/212 (56.60%), Postives = 154/212 (72.64%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKSSHLAVSKSVDLRSSF 60
           MV A FVVG+PV+DS   P LC D+         + G +   R+   L  +++++L SSF
Sbjct: 1   MVSAWFVVGSPVMDSSSSPCLCLDA--------HTTGTI---RRKKILGKARNLELGSSF 60

Query: 61  VNSAGEWRLSASGGNRSRRNQRRNRRLVVVNE-FAGQYEDSFDDVKMQIQNYFTYKAVKT 120
             S   +RLS      SR   R++++L++VNE  AG Y+D+F DV+ QI NYFTYKAV+T
Sbjct: 61  TGSRIVFRLSPK--RVSRIANRKSKKLLIVNEDVAGNYDDTFGDVQKQIVNYFTYKAVRT 120

Query: 121 VLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVKK 180
           VL+QLYEMNP QY WFYN ++ ++P +GKRF+R L KE Q+LAERVMITRLHLY KW+KK
Sbjct: 121 VLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITRLHLYGKWIKK 180

Query: 181 CDHAEMYKEISDENLELMRERLMETVIWPSDD 212
           CDH ++Y+EISDENL LMRERLMETVIWPSDD
Sbjct: 181 CDHGKIYQEISDENLALMRERLMETVIWPSDD 199

[Close]

BLAST of Bhi10G000232 vs. ExPASy Swiss-Prot
Match: Q44212 (RuBisCO chaperone RbcX OS=Anabaena sp. (strain CA / ATCC 33047) OX=52271 GN=rbcX PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.0e-07
Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 103 DVKMQIQNYFTYKAVKTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLA 162
           D    +Q+Y TY+A++TVL QL E NP    W +NF    K  +G+++I  L  EK DLA
Sbjct: 9   DTAKTLQSYLTYQALRTVLAQLGETNPPLALWLHNFSAG-KVQDGEKYIEELFLEKPDLA 68

Query: 163 ERVMITRLHL 173
            R+M  R H+
Sbjct: 69  LRIMTVREHI 77

[Close]

BLAST of Bhi10G000232 vs. ExPASy Swiss-Prot
Match: O86418 (RuBisCO chaperone RbcX OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbcX PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-06
Identity = 35/100 (35.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 103 DVKMQIQNYFTYKAVKTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLA 162
           D    +Q+Y TY+A+ TVL QL E NP    W + F V  K  +G+ +++ L +E+ DLA
Sbjct: 9   DTAKTLQSYLTYQALMTVLAQLGETNPPLALWLHTFSVG-KVQDGEAYVKELFREQPDLA 68

Query: 163 ERVMITRLHLYNKWVKKCDHAEMYKE-ISDENLELMRERL 202
            R+M  R H+  +  +     EM +  I   N+E  R+ L
Sbjct: 69  LRIMTVREHIAEEVAEFL--PEMVRSGIQQANMEQRRQHL 105

[Close]

BLAST of Bhi10G000232 vs. ExPASy Swiss-Prot
Match: Q8DIS6 (RuBisCO chaperone RbcX OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rbcX PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.6e-06
Identity = 28/103 (27.18%), Postives = 49/103 (47.57%), Query Frame = 0


Query: 110 NYFTYKAVKTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITR 169
           +Y TY+AV+TV+ QL E +P +  W + F       +G+R++  L +E+ DL  R++  R
Sbjct: 16  SYLTYQAVRTVIGQLAETDPPRSLWLHQFTSQESIQDGERYLEALFREQPDLGFRILTVR 75

Query: 170 LHLYN-----------------KWVKKCDHAEMYKEISDENLE 196
            HL                      ++C   E   ++S+ N+E
Sbjct: 76  EHLAEMVADYLPEMLRAGIQQANLQQRCQQLERMTQVSEANVE 118

[Close]

BLAST of Bhi10G000232 vs. NCBI nr
Match: XP_038902700.1 (chaperonin-like RbcX protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 421.0 bits (1081), Expect = 6.0e-114
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKSSHLAVSKSVDLRSSF 60
           MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKSSHLAVSKSVDLRSSF
Sbjct: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKSSHLAVSKSVDLRSSF 60

Query: 61  VNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVKTV 120
           VNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVKTV
Sbjct: 61  VNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAVKTV 120

Query: 121 LNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVKKC 180
           LNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVKKC
Sbjct: 121 LNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWVKKC 180

Query: 181 DHAEMYKEISDENLELMRERLMETVIWPSDD 212
           DHAEMYKEISDENLELMRERLMETVIWPSDD
Sbjct: 181 DHAEMYKEISDENLELMRERLMETVIWPSDD 211

[Close]

BLAST of Bhi10G000232 vs. NCBI nr
Match: XP_023512052.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.2 bits (957), Expect = 1.4e-99
Identity = 189/214 (88.32%), Postives = 198/214 (92.52%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKS---SHLAVSKSVDLR 60
           MVGALFV GAPV+DSPPCP LC DSSPVT  SLRS GDLVL R+S   SHLAVS+ VDLR
Sbjct: 1   MVGALFVAGAPVIDSPPCPCLCLDSSPVTNMSLRSRGDLVLPRRSKAKSHLAVSRLVDLR 60

Query: 61  SSFVNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120
           SSFVNS  EW+LSASGG+R RRNQRRNRRLVVVNEFAGQYE+SFDDVKMQI NYFTYKAV
Sbjct: 61  SSFVNSGSEWQLSASGGHRRRRNQRRNRRLVVVNEFAGQYEESFDDVKMQILNYFTYKAV 120

Query: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180
           KTVLNQLYEMNPTQYRWFY+FVVNHKP +GKRFIRTLVKEKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYDFVVNHKPRDGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

Query: 181 KKCDHAEMYKEISDENLELMRERLMETVIWPSDD 212
           KKCDHAE+YKEISDENLELMRERLMETVIWPSDD
Sbjct: 181 KKCDHAEIYKEISDENLELMRERLMETVIWPSDD 214

[Close]

BLAST of Bhi10G000232 vs. NCBI nr
Match: XP_022944576.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 370.2 bits (949), Expect = 1.2e-98
Identity = 188/214 (87.85%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKS---SHLAVSKSVDLR 60
           MVGAL V GAPV+DSPPCP LC DSSPVT  SLRS GDLVL R+S   SHLAVS+ VDLR
Sbjct: 1   MVGALCVAGAPVIDSPPCPCLCLDSSPVTNMSLRSRGDLVLPRRSKAKSHLAVSRLVDLR 60

Query: 61  SSFVNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120
           SSFVNS  EW+LSASGG+R RRNQRRNRRLVVVNEFAGQYE+SFDDVKMQI NYFTYKAV
Sbjct: 61  SSFVNSGSEWQLSASGGHRRRRNQRRNRRLVVVNEFAGQYEESFDDVKMQILNYFTYKAV 120

Query: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180
           KTVLNQLYEMNPTQYRWFY+FVVNHKP +GKRFIRTLVKEKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYDFVVNHKPRDGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

Query: 181 KKCDHAEMYKEISDENLELMRERLMETVIWPSDD 212
           KKCDHAE+YKEISDENLELMRERLMETVIWPSDD
Sbjct: 181 KKCDHAEIYKEISDENLELMRERLMETVIWPSDD 214

[Close]

BLAST of Bhi10G000232 vs. NCBI nr
Match: KAA0041415.1 (RcbX domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 369.0 bits (946), Expect = 2.7e-98
Identity = 191/214 (89.25%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKS---SHLAVSKSVDLR 60
           MVGALFVVGAPV+DSPP P    DSSPVT  SLRSGGDLVLQRKS   S+  VSKSVDLR
Sbjct: 1   MVGALFVVGAPVIDSPP-PCFSFDSSPVTNMSLRSGGDLVLQRKSKTKSYSTVSKSVDLR 60

Query: 61  SSFVNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120
           SSFVN   EW+LSA G  RSRRNQRRNRRLV+VNEFAGQYEDSFDDVKMQIQNYFTYKAV
Sbjct: 61  SSFVNFGDEWQLSAGGCRRSRRNQRRNRRLVIVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180
           KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

Query: 181 KKCDHAEMYKEISDENLELMRERLMETVIWPSDD 212
           KKCDHAE+YKEISDENLELMRERLMETVIWPSDD
Sbjct: 181 KKCDHAEIYKEISDENLELMRERLMETVIWPSDD 213

[Close]

BLAST of Bhi10G000232 vs. NCBI nr
Match: XP_004142113.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucumis sativus] >KGN54180.1 hypothetical protein Csa_018190 [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 6.0e-98
Identity = 192/214 (89.72%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKS---SHLAVSKSVDLR 60
           MVGALFVVGAPVVDS P P L  DSSPVT  SLRSGGDLVLQRKS   S+L VSKSVDLR
Sbjct: 1   MVGALFVVGAPVVDSLP-PCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLR 60

Query: 61  SSFVNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120
           SSFVN   EW+LSA GG +S+RNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV
Sbjct: 61  SSFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180
           KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

Query: 181 KKCDHAEMYKEISDENLELMRERLMETVIWPSDD 212
           KKCDHAE+YK ISDENLELMRERLMETVIWPSDD
Sbjct: 181 KKCDHAEIYKGISDENLELMRERLMETVIWPSDD 213

[Close]

BLAST of Bhi10G000232 vs. ExPASy TrEMBL
Match: A0A6J1FUS7 (chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448989 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.9e-99
Identity = 188/214 (87.85%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKS---SHLAVSKSVDLR 60
           MVGAL V GAPV+DSPPCP LC DSSPVT  SLRS GDLVL R+S   SHLAVS+ VDLR
Sbjct: 1   MVGALCVAGAPVIDSPPCPCLCLDSSPVTNMSLRSRGDLVLPRRSKAKSHLAVSRLVDLR 60

Query: 61  SSFVNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120
           SSFVNS  EW+LSASGG+R RRNQRRNRRLVVVNEFAGQYE+SFDDVKMQI NYFTYKAV
Sbjct: 61  SSFVNSGSEWQLSASGGHRRRRNQRRNRRLVVVNEFAGQYEESFDDVKMQILNYFTYKAV 120

Query: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180
           KTVLNQLYEMNPTQYRWFY+FVVNHKP +GKRFIRTLVKEKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYDFVVNHKPRDGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

Query: 181 KKCDHAEMYKEISDENLELMRERLMETVIWPSDD 212
           KKCDHAE+YKEISDENLELMRERLMETVIWPSDD
Sbjct: 181 KKCDHAEIYKEISDENLELMRERLMETVIWPSDD 214

[Close]

BLAST of Bhi10G000232 vs. ExPASy TrEMBL
Match: A0A5A7TJ10 (RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00620 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 191/214 (89.25%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKS---SHLAVSKSVDLR 60
           MVGALFVVGAPV+DSPP P    DSSPVT  SLRSGGDLVLQRKS   S+  VSKSVDLR
Sbjct: 1   MVGALFVVGAPVIDSPP-PCFSFDSSPVTNMSLRSGGDLVLQRKSKTKSYSTVSKSVDLR 60

Query: 61  SSFVNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120
           SSFVN   EW+LSA G  RSRRNQRRNRRLV+VNEFAGQYEDSFDDVKMQIQNYFTYKAV
Sbjct: 61  SSFVNFGDEWQLSAGGCRRSRRNQRRNRRLVIVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180
           KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

Query: 181 KKCDHAEMYKEISDENLELMRERLMETVIWPSDD 212
           KKCDHAE+YKEISDENLELMRERLMETVIWPSDD
Sbjct: 181 KKCDHAEIYKEISDENLELMRERLMETVIWPSDD 213

[Close]

BLAST of Bhi10G000232 vs. ExPASy TrEMBL
Match: A0A0A0KX19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291920 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.9e-98
Identity = 192/214 (89.72%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKS---SHLAVSKSVDLR 60
           MVGALFVVGAPVVDS P P L  DSSPVT  SLRSGGDLVLQRKS   S+L VSKSVDLR
Sbjct: 1   MVGALFVVGAPVVDSLP-PCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLR 60

Query: 61  SSFVNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120
           SSFVN   EW+LSA GG +S+RNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV
Sbjct: 61  SSFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180
           KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

Query: 181 KKCDHAEMYKEISDENLELMRERLMETVIWPSDD 212
           KKCDHAE+YK ISDENLELMRERLMETVIWPSDD
Sbjct: 181 KKCDHAEIYKGISDENLELMRERLMETVIWPSDD 213

[Close]

BLAST of Bhi10G000232 vs. ExPASy TrEMBL
Match: A0A5D3BAI6 (RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001050 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.8e-98
Identity = 190/214 (88.79%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKS---SHLAVSKSVDLR 60
           MVGALFVVGAPV+DSPP P    DSSPVT  SLRSGGDLVLQRKS   S+  VSKSVDLR
Sbjct: 1   MVGALFVVGAPVIDSPP-PCFSFDSSPVTNMSLRSGGDLVLQRKSKTKSYSTVSKSVDLR 60

Query: 61  SSFVNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120
           SSFVN   EW+LSA G  +SRRNQRRNRRLV+VNEFAGQYEDSFDDVKMQIQNYFTYKAV
Sbjct: 61  SSFVNFGDEWQLSAGGCRQSRRNQRRNRRLVIVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180
           KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

Query: 181 KKCDHAEMYKEISDENLELMRERLMETVIWPSDD 212
           KKCDHAE+YKEISDENLELMRERLMETVIWPSDD
Sbjct: 181 KKCDHAEIYKEISDENLELMRERLMETVIWPSDD 213

[Close]

BLAST of Bhi10G000232 vs. ExPASy TrEMBL
Match: A0A1S3BNA7 (uncharacterized protein LOC103491510 OS=Cucumis melo OX=3656 GN=LOC103491510 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.8e-98
Identity = 190/214 (88.79%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKS---SHLAVSKSVDLR 60
           MVGALFVVGAPV+DSPP P    DSSPVT  SLRSGGDLVLQRKS   S+  VSKSVDLR
Sbjct: 1   MVGALFVVGAPVIDSPP-PCFSFDSSPVTNMSLRSGGDLVLQRKSKTKSYSTVSKSVDLR 60

Query: 61  SSFVNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120
           SSFVN   EW+LSA G  +SRRNQRRNRRLV+VNEFAGQYEDSFDDVKMQIQNYFTYKAV
Sbjct: 61  SSFVNFGDEWQLSAGGCRQSRRNQRRNRRLVIVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180
           KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

Query: 181 KKCDHAEMYKEISDENLELMRERLMETVIWPSDD 212
           KKCDHAE+YKEISDENLELMRERLMETVIWPSDD
Sbjct: 181 KKCDHAEIYKEISDENLELMRERLMETVIWPSDD 213

The following BLAST results are available for this feature:

BLAST of Bhi10G000232 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19855.1	7.7e-59	56.60	Chaperonin-like RbcX protein	[more]

BLAST of Bhi10G000232 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9X2	1.1e-57	56.60	Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q44212	3.0e-07	42.86	RuBisCO chaperone RbcX OS=Anabaena sp. (strain CA / ATCC 33047) OX=52271 GN=rbcX...	[more]
O86418	1.9e-06	35.00	RuBisCO chaperone RbcX OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) O...	[more]
Q8DIS6	5.6e-06	27.18	RuBisCO chaperone RbcX OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 ...	[more]

BLAST of Bhi10G000232 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902700.1	6.0e-114	100.00	chaperonin-like RbcX protein 2, chloroplastic [Benincasa hispida]	[more]
XP_023512052.1	1.4e-99	88.32	chaperonin-like RbcX protein 2, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022944576.1	1.2e-98	87.85	chaperonin-like RbcX protein 2, chloroplastic [Cucurbita moschata]	[more]
KAA0041415.1	2.7e-98	89.25	RcbX domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_004142113.1	6.0e-98	89.72	chaperonin-like RbcX protein 2, chloroplastic [Cucumis sativus] >KGN54180.1 hypo...	[more]

BLAST of Bhi10G000232 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUS7	5.9e-99	87.85	chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5A7TJ10	1.3e-98	89.25	RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0KX19	2.9e-98	89.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291920 PE=4 SV=1	[more]
A0A5D3BAI6	3.8e-98	88.79	RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BNA7	3.8e-98	88.79	uncharacterized protein LOC103491510 OS=Cucumis melo OX=3656 GN=LOC103491510 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038052	Chaperonin-like RbcX superfamily	GENE3D	1.10.1200.210		coord: 90..211 e-value: 1.4E-47 score: 162.7
IPR038052	Chaperonin-like RbcX superfamily	SUPERFAMILY	158615	RbcX-like	coord: 96..211
IPR003435	Chaperonin-like RbcX	PFAM	PF02341	RcbX	coord: 106..204 e-value: 2.4E-20 score: 72.9
IPR003435	Chaperonin-like RbcX	PANTHER	PTHR33791	FAMILY NOT NAMED	coord: 1..211
None	No IPR available	PANTHER	PTHR33791:SF1	CHAPERONIN-LIKE RBCX PROTEIN 2, CHLOROPLASTIC	coord: 1..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000232	Bhi10M000232	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015977	carbon fixation
biological_process	GO:0015979	photosynthesis
biological_process	GO:0006457	protein folding
biological_process	GO:0110102	ribulose bisphosphate carboxylase complex assembly
molecular_function	GO:0044183	protein folding chaperone