Bhi10G000090 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G000090
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	RING-H2 finger protein ATL57-like
Location	chr10: 2701385 .. 2701894 (+)
RNA-Seq Expression	Bhi10G000090
Synteny	Bhi10G000090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCTCCCATCGCCTAATCTTCCCCTCGAAAAAGCCACCACCCAAGAATCTTCTTCTCCTCCTCATTCCTTCAAATTCTCCCAATTATTCCCACCCTTCACCCTTAAAACGGCAGTCATCCTCCTAACCCTCCTCCTCGTTTTCCTTCTCTTCACCATTTTATCAATCTACATCCGTAGCTACGCCGAACGCCGCCACTCCTTCCCTCTGCCGCACGTCCGGCTGCCGCGGATGGCGGCGGGTTCCTCTGCCAATGGTGTGGACCCGGCCGTCGTTGGGTCGCTTCCGGTTTCTGCTTACTGTTGCGACGACAAGTTGCAGGTCGATTGTGCGATTTGTCTGAGCGAGTTTGAGGTGGAAGAGAGGGTTAAAACGATACCGTTTTGTCAGCACGTGTTTCATCCTGAGTGTATTGACACGTGGCTGTTTTCACACGTGTCTTGTCCGGTTTGCCGGTCGACGCAATTCTTTTTGTTGGTGCCGGAACGGCGAGCGGAGGACGATTGA

mRNA sequence

ATGAATCTCCCATCGCCTAATCTTCCCCTCGAAAAAGCCACCACCCAAGAATCTTCTTCTCCTCCTCATTCCTTCAAATTCTCCCAATTATTCCCACCCTTCACCCTTAAAACGGCAGTCATCCTCCTAACCCTCCTCCTCGTTTTCCTTCTCTTCACCATTTTATCAATCTACATCCGTAGCTACGCCGAACGCCGCCACTCCTTCCCTCTGCCGCACGTCCGGCTGCCGCGGATGGCGGCGGGTTCCTCTGCCAATGGTGTGGACCCGGCCGTCGTTGGGTCGCTTCCGGTTTCTGCTTACTGTTGCGACGACAAGTTGCAGGTCGATTGTGCGATTTGTCTGAGCGAGTTTGAGGTGGAAGAGAGGGTTAAAACGATACCGTTTTGTCAGCACGTGTTTCATCCTGAGTGTATTGACACGTGGCTGTTTTCACACGTGTCTTGTCCGGTTTGCCGGTCGACGCAATTCTTTTTGTTGGTGCCGGAACGGCGAGCGGAGGACGATTGA

Coding sequence (CDS)

ATGAATCTCCCATCGCCTAATCTTCCCCTCGAAAAAGCCACCACCCAAGAATCTTCTTCTCCTCCTCATTCCTTCAAATTCTCCCAATTATTCCCACCCTTCACCCTTAAAACGGCAGTCATCCTCCTAACCCTCCTCCTCGTTTTCCTTCTCTTCACCATTTTATCAATCTACATCCGTAGCTACGCCGAACGCCGCCACTCCTTCCCTCTGCCGCACGTCCGGCTGCCGCGGATGGCGGCGGGTTCCTCTGCCAATGGTGTGGACCCGGCCGTCGTTGGGTCGCTTCCGGTTTCTGCTTACTGTTGCGACGACAAGTTGCAGGTCGATTGTGCGATTTGTCTGAGCGAGTTTGAGGTGGAAGAGAGGGTTAAAACGATACCGTTTTGTCAGCACGTGTTTCATCCTGAGTGTATTGACACGTGGCTGTTTTCACACGTGTCTTGTCCGGTTTGCCGGTCGACGCAATTCTTTTTGTTGGTGCCGGAACGGCGAGCGGAGGACGATTGA

Protein sequence

MNLPSPNLPLEKATTQESSSPPHSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYIRSYAERRHSFPLPHVRLPRMAAGSSANGVDPAVVGSLPVSAYCCDDKLQVDCAICLSEFEVEERVKTIPFCQHVFHPECIDTWLFSHVSCPVCRSTQFFLLVPERRAEDD

Homology

[Close]

BLAST of Bhi10G000090 vs. TAIR 10
Match: AT4G40070.1 (RING/U-box superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-18
Identity = 59/149 (39.60%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 12  KATTQE-SSSPPHSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYIRSYAERRHSFP 71
           KA  Q  S SPP       L    T     +   L+ +F L  +LS+YIR  A       
Sbjct: 25  KANAQSFSPSPP------DLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCARSNPDSS 84

Query: 72  LPHVRLPRMAAGSSANGVDPAVVGSLPVSAYCC--DDKL---QVDCAICLSEFEVEERVK 131
             + R       S   G+D AVV S PV AY    + K+    ++CAICL+E E  E V+
Sbjct: 85  TRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVR 144

Query: 132 TIPFCQHVFHPECIDTWLFSHVSCPVCRS 155
            +P C H+FH +CIDTWL+SH +CPVCRS
Sbjct: 145 LLPICNHLFHIDCIDTWLYSHATCPVCRS 167

[Close]

BLAST of Bhi10G000090 vs. TAIR 10
Match: AT2G27940.1 (RING/U-box superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 4.0e-18
Identity = 58/146 (39.73%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 32  PPFTLKTAVILLTLLLVFLLFTI--LSIYIRSYAERRHS----FPLPHVRLPRMAAG--- 91
           PP  L + + L   +L+  LF +   S+Y R +A+   S      +P  R  RM+     
Sbjct: 42  PPSALDSTMALTIFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLS 101

Query: 92  ---------SSANGVDPAVVGSLPVSAYCCDDKLQ-VDCAICLSEFEVEERVKTIPFCQH 151
                    S   G+D   V SLPV  Y    K +  DC ICLS+FE  E VK IP C H
Sbjct: 102 TSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGH 161

Query: 152 VFHPECIDTWLFSHVSCPVCRSTQFF 159
           VFH +C+DTWL S+V+CP+CRS Q F
Sbjct: 162 VFHVDCVDTWLSSYVTCPLCRSNQLF 187

[Close]

BLAST of Bhi10G000090 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 82.0 bits (201), Expect = 4.9e-16
Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 38  TAVILLTLLLVFLLFTILSIYIRSY---AERRHSFPLPHVRL---------PRMAAGS-- 97
           +A+++L  +++ ++F  L +Y R Y   A RRH       R          P  AA S  
Sbjct: 33  SAIVILFFVVILMVF--LHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVV 92

Query: 98  SANGVDPAVVGSLPVSAYCCD-DKLQVDCAICLSEFEVEERVKTIPFCQHVFHPECIDTW 155
           ++ G+DP V+ SLPV  +  +  K  ++CA+CLSEFE  E  + +P CQH FH +CID W
Sbjct: 93  ASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMW 152

[Close]

BLAST of Bhi10G000090 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.9e-15
Identity = 54/156 (34.62%), Postives = 79/156 (50.64%), Query Frame = 0


Query: 13  ATTQESSSPPHS-FKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYIRSYAERRHSFPL 72
           A +Q    P +  + + +L P      AVI++ L+         SIY       RH   +
Sbjct: 27  AASQSQPGPTNQPYNYGRLSPAM----AVIVVILIAALFFMGFFSIYF------RHCSGV 86

Query: 73  PHVRL-------PRMAAGSSANGVDPAVVGSLPVSAYCCDDKLQ------VDCAICLSEF 132
           P   +        R    ++A G+D +VV + P   Y  D K Q      ++CAICL+EF
Sbjct: 87  PDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLY-SDVKTQKLGKGELECAICLNEF 146

Query: 133 EVEERVKTIPFCQHVFHPECIDTWLFSHVSCPVCRS 155
           E +E ++ +P C HVFHP CID WL +HV+CPVCR+
Sbjct: 147 EDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRA 171

[Close]

BLAST of Bhi10G000090 vs. TAIR 10
Match: AT1G72200.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-15
Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 0


Query: 39  AVILLTLLLVFLLFTILSIYIRSYAER--RHSFPLPHVRLPRMAAG-SSANGVDPAVVGS 98
           A++++ L+ VF      S+YIR   ER     +  P+     +A     A G+D +++ +
Sbjct: 64  AILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIET 123

Query: 99  LPVSAYCCDDKLQV-----DCAICLSEFEVEERVKTIPFCQHVFHPECIDTWLFSHVSCP 155
            P   Y     L++     +C++CL+EFE +E ++ IP C HVFHP CID WL SH +CP
Sbjct: 124 FPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCP 183

[Close]

BLAST of Bhi10G000090 vs. ExPASy Swiss-Prot
Match: Q8W571 (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 90.1 bits (222), Expect = 2.6e-17
Identity = 59/149 (39.60%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 12  KATTQE-SSSPPHSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYIRSYAERRHSFP 71
           KA  Q  S SPP       L    T     +   L+ +F L  +LS+YIR  A       
Sbjct: 25  KANAQSFSPSPP------DLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCARSNPDSS 84

Query: 72  LPHVRLPRMAAGSSANGVDPAVVGSLPVSAYCC--DDKL---QVDCAICLSEFEVEERVK 131
             + R       S   G+D AVV S PV AY    + K+    ++CAICL+E E  E V+
Sbjct: 85  TRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVR 144

Query: 132 TIPFCQHVFHPECIDTWLFSHVSCPVCRS 155
            +P C H+FH +CIDTWL+SH +CPVCRS
Sbjct: 145 LLPICNHLFHIDCIDTWLYSHATCPVCRS 167

[Close]

BLAST of Bhi10G000090 vs. ExPASy Swiss-Prot
Match: Q9SJJ7 (RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.7e-17
Identity = 58/146 (39.73%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 32  PPFTLKTAVILLTLLLVFLLFTI--LSIYIRSYAERRHS----FPLPHVRLPRMAAG--- 91
           PP  L + + L   +L+  LF +   S+Y R +A+   S      +P  R  RM+     
Sbjct: 42  PPSALDSTMALTIFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLS 101

Query: 92  ---------SSANGVDPAVVGSLPVSAYCCDDKLQ-VDCAICLSEFEVEERVKTIPFCQH 151
                    S   G+D   V SLPV  Y    K +  DC ICLS+FE  E VK IP C H
Sbjct: 102 TSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGH 161

Query: 152 VFHPECIDTWLFSHVSCPVCRSTQFF 159
           VFH +C+DTWL S+V+CP+CRS Q F
Sbjct: 162 VFHVDCVDTWLSSYVTCPLCRSNQLF 187

[Close]

BLAST of Bhi10G000090 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 7.0e-15
Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 38  TAVILLTLLLVFLLFTILSIYIRSY---AERRHSFPLPHVRL---------PRMAAGS-- 97
           +A+++L  +++ ++F  L +Y R Y   A RRH       R          P  AA S  
Sbjct: 33  SAIVILFFVVILMVF--LHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVV 92

Query: 98  SANGVDPAVVGSLPVSAYCCD-DKLQVDCAICLSEFEVEERVKTIPFCQHVFHPECIDTW 155
           ++ G+DP V+ SLPV  +  +  K  ++CA+CLSEFE  E  + +P CQH FH +CID W
Sbjct: 93  ASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMW 152

[Close]

BLAST of Bhi10G000090 vs. ExPASy Swiss-Prot
Match: Q8H7N9 (E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0188200 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.6e-14
Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 0


Query: 34  FTLKTAVILLTLLLVFLLFTILSIYIRSYAER----RHSFPLPHVRLP---RMAAGSSAN 93
           FT  T V+L+ L+  F+L T+ S+ I   A+     R +F       P     AA  ++ 
Sbjct: 43  FTPTTVVVLVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTASHQPVGGAAAASRASR 102

Query: 94  GVDPAVVGSLPVSAYCCDDKLQ-------VDCAICLSEFEVEERVKTIPFCQHVFHPECI 153
           G+D  VV + P + Y  D K +       ++CA+CL+EF   + ++ +P C HVFHP+CI
Sbjct: 103 GLDKEVVEAFPTAVY-GDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCI 162

Query: 154 DTWLFSHVSCPVCRS 155
           D WL + V+CP+CR+
Sbjct: 163 DPWLAAAVTCPLCRA 176

[Close]

BLAST of Bhi10G000090 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 2.6e-14
Identity = 54/156 (34.62%), Postives = 79/156 (50.64%), Query Frame = 0


Query: 13  ATTQESSSPPHS-FKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYIRSYAERRHSFPL 72
           A +Q    P +  + + +L P      AVI++ L+         SIY       RH   +
Sbjct: 27  AASQSQPGPTNQPYNYGRLSPAM----AVIVVILIAALFFMGFFSIYF------RHCSGV 86

Query: 73  PHVRL-------PRMAAGSSANGVDPAVVGSLPVSAYCCDDKLQ------VDCAICLSEF 132
           P   +        R    ++A G+D +VV + P   Y  D K Q      ++CAICL+EF
Sbjct: 87  PDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLY-SDVKTQKLGKGELECAICLNEF 146

Query: 133 EVEERVKTIPFCQHVFHPECIDTWLFSHVSCPVCRS 155
           E +E ++ +P C HVFHP CID WL +HV+CPVCR+
Sbjct: 147 EDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRA 171

[Close]

BLAST of Bhi10G000090 vs. NCBI nr
Match: XP_016903383.1 (PREDICTED: RING-H2 finger protein ATL57-like [Cucumis melo] >KAA0037295.1 RING-H2 finger protein ATL57-like [Cucumis melo var. makuwa] >TYK24189.1 RING-H2 finger protein ATL57-like [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 4.1e-57
Identity = 117/157 (74.52%), Postives = 130/157 (82.80%), Query Frame = 0


Query: 1   MNLPSPNLPLEKATTQESSSPPHSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYIR 60
           +NLPSP+LPLE  TT ++ S   SFKFSQLFPPF LKTA ILLTLLL+F LFTI SIYIR
Sbjct: 18  VNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILLTLLLLFFLFTIFSIYIR 77

Query: 61  SYAERRHSFPLPHVRLPRMAAGSSANGVDPAVVGSLPVSAYCCDDKLQVDCAICLSEFEV 120
            +AERR+ FP P +R P  AA SSANG+D  VV SLPVS+Y CDDKLQVDC ICLSEFE 
Sbjct: 78  RFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRCDDKLQVDCPICLSEFEA 137

Query: 121 EERVKTIPFCQHVFHPECIDTWLFSHVSCPVCRSTQF 158
            ERVKTIPFC+HVFHP+CID WLFSHVSCPVCRST+F
Sbjct: 138 GERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEF 174

[Close]

BLAST of Bhi10G000090 vs. NCBI nr
Match: KGN46895.1 (hypothetical protein Csa_020764 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 5.3e-36
Identity = 90/128 (70.31%), Postives = 100/128 (78.12%), Query Frame = 0


Query: 1   MNLPSPNLPLEKATTQESSSPPHSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYIR 60
           MNLPSP+ PLE  TT ++SS  HSFKFSQLFPPF LKTA ILL LLL+F LFTI SIYIR
Sbjct: 18  MNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIR 77

Query: 61  SYAERRHSFPLPH-VRLPRMAAGSSANGVDPAVVGSLPVSAYCCDDKLQVDCAICLSEFE 120
            +AERR+ FP P  +R P  A+ SSANGVD AVV SLPV AY CDDKLQVDC ICLSEFE
Sbjct: 78  RFAERRYPFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFE 137

Query: 121 VEERVKTI 128
            EE+V  +
Sbjct: 138 AEEKVAVL 145

[Close]

BLAST of Bhi10G000090 vs. NCBI nr
Match: XP_021278965.1 (RING-H2 finger protein ATL57 [Herrania umbratica])

HSP 1 Score: 131.7 bits (330), Expect = 5.8e-27
Identity = 82/171 (47.95%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 2   NLPSPNLPLEKATTQESSSPP--HSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYI 61
           +LPSP L   +     S+S P   S K SQ  PPF    A+ ++ LL         SIYI
Sbjct: 20  SLPSPPLHHHRPVNTNSTSSPLSSSKKLSQQNPPFDSSMALTIVVLLTALFFMGFFSIYI 79

Query: 62  RSYAE-------RRHSFP---LPHVRLP--RMAAGSSANGVDPAVVGSLPVSAYCCDDKL 121
           R ++E       RR  +    L  + LP  R    +   G+DP  VGSLPV +Y  D K 
Sbjct: 80  RRFSEEPTAHLSRRRRYRGGLLDTLSLPSDRHHVSTPRKGLDPTTVGSLPVYSYHGDAKY 139

Query: 122 QVDCAICLSEFEVEERVKTIPFCQHVFHPECIDTWLFSHVSCPVCRSTQFF 159
           Q+DCAICLSEFE +E VKTIP C+HVFH ECIDTWL SHVSCPVCR T+ F
Sbjct: 140 QIDCAICLSEFEEKECVKTIPCCKHVFHVECIDTWLTSHVSCPVCRGTRLF 190

[Close]

BLAST of Bhi10G000090 vs. NCBI nr
Match: EOY33660.1 (RING/U-box superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-26
Identity = 82/169 (48.52%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 2   NLPSPNLPLEKATTQESSSPP--HSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYI 61
           +LPSP L   + TT  S+S P   S K SQ   PF    A+ ++ LL         SIYI
Sbjct: 20  SLPSPPLHHHRPTTTNSTSSPLSSSKKLSQQNDPFDSSMALTIVVLLTALFFMGFFSIYI 79

Query: 62  RSYAE-------RRHSF---PLPHVRLP--RMAAGSSANGVDPAVVGSLPVSAYCCDDKL 121
           R ++E       RR  +    L  + LP  R    +   G+DP  VGSLPV +Y  D K 
Sbjct: 80  RRFSEEPTAHLSRRRRYRGGSLDTLSLPSDRHHVSTPRKGLDPTTVGSLPVYSYHGDAKY 139

Query: 122 QVDCAICLSEFEVEERVKTIPFCQHVFHPECIDTWLFSHVSCPVCRSTQ 157
           Q+DCAICLSEFE +E VKTIP C+HVFH ECIDTWL SHVSCPVCR T+
Sbjct: 140 QIDCAICLSEFEEKECVKTIPCCEHVFHVECIDTWLTSHVSCPVCRGTR 188

[Close]

BLAST of Bhi10G000090 vs. NCBI nr
Match: XP_007016041.2 (PREDICTED: RING-H2 finger protein ATL57 [Theobroma cacao])

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-26
Identity = 81/169 (47.93%), Postives = 98/169 (57.99%), Query Frame = 0


Query: 2   NLPSPNLPLEKATTQESSSPP--HSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYI 61
           +LPSP L   + TT  S+S P   S K  Q   PF    A+ ++ LL         SIYI
Sbjct: 20  SLPSPPLHHHRPTTTNSTSSPLSSSKKLPQQNDPFDSSMALTIVVLLTALFFMGFFSIYI 79

Query: 62  RSYAE-------RRHSF---PLPHVRLP--RMAAGSSANGVDPAVVGSLPVSAYCCDDKL 121
           R ++E       RR  +    L  + LP  R    +   G+DP  VGSLPV +Y  D K 
Sbjct: 80  RRFSEEPTAHLSRRRRYRGGSLDTLSLPSDRHHVSTPRKGLDPTTVGSLPVYSYHGDAKY 139

Query: 122 QVDCAICLSEFEVEERVKTIPFCQHVFHPECIDTWLFSHVSCPVCRSTQ 157
           Q+DCAICLSEFE +E VKTIP C+HVFH ECIDTWL SHVSCPVCR T+
Sbjct: 140 QIDCAICLSEFEEKECVKTIPCCEHVFHVECIDTWLTSHVSCPVCRGTR 188

[Close]

BLAST of Bhi10G000090 vs. ExPASy TrEMBL
Match: A0A5A7T753 (RING-H2 finger protein ATL57-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1754G00230 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.0e-57
Identity = 117/157 (74.52%), Postives = 130/157 (82.80%), Query Frame = 0


Query: 1   MNLPSPNLPLEKATTQESSSPPHSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYIR 60
           +NLPSP+LPLE  TT ++ S   SFKFSQLFPPF LKTA ILLTLLL+F LFTI SIYIR
Sbjct: 18  VNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILLTLLLLFFLFTIFSIYIR 77

Query: 61  SYAERRHSFPLPHVRLPRMAAGSSANGVDPAVVGSLPVSAYCCDDKLQVDCAICLSEFEV 120
            +AERR+ FP P +R P  AA SSANG+D  VV SLPVS+Y CDDKLQVDC ICLSEFE 
Sbjct: 78  RFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRCDDKLQVDCPICLSEFEA 137

Query: 121 EERVKTIPFCQHVFHPECIDTWLFSHVSCPVCRSTQF 158
            ERVKTIPFC+HVFHP+CID WLFSHVSCPVCRST+F
Sbjct: 138 GERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEF 174

[Close]

BLAST of Bhi10G000090 vs. ExPASy TrEMBL
Match: A0A1S4E570 (RING-H2 finger protein ATL57-like OS=Cucumis melo OX=3656 GN=LOC107992155 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.0e-57
Identity = 117/157 (74.52%), Postives = 130/157 (82.80%), Query Frame = 0


Query: 1   MNLPSPNLPLEKATTQESSSPPHSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYIR 60
           +NLPSP+LPLE  TT ++ S   SFKFSQLFPPF LKTA ILLTLLL+F LFTI SIYIR
Sbjct: 18  VNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILLTLLLLFFLFTIFSIYIR 77

Query: 61  SYAERRHSFPLPHVRLPRMAAGSSANGVDPAVVGSLPVSAYCCDDKLQVDCAICLSEFEV 120
            +AERR+ FP P +R P  AA SSANG+D  VV SLPVS+Y CDDKLQVDC ICLSEFE 
Sbjct: 78  RFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRCDDKLQVDCPICLSEFEA 137

Query: 121 EERVKTIPFCQHVFHPECIDTWLFSHVSCPVCRSTQF 158
            ERVKTIPFC+HVFHP+CID WLFSHVSCPVCRST+F
Sbjct: 138 GERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEF 174

[Close]

BLAST of Bhi10G000090 vs. ExPASy TrEMBL
Match: A0A0A0KAY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149360 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.6e-36
Identity = 90/128 (70.31%), Postives = 100/128 (78.12%), Query Frame = 0


Query: 1   MNLPSPNLPLEKATTQESSSPPHSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYIR 60
           MNLPSP+ PLE  TT ++SS  HSFKFSQLFPPF LKTA ILL LLL+F LFTI SIYIR
Sbjct: 18  MNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIR 77

Query: 61  SYAERRHSFPLPH-VRLPRMAAGSSANGVDPAVVGSLPVSAYCCDDKLQVDCAICLSEFE 120
            +AERR+ FP P  +R P  A+ SSANGVD AVV SLPV AY CDDKLQVDC ICLSEFE
Sbjct: 78  RFAERRYPFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFE 137

Query: 121 VEERVKTI 128
            EE+V  +
Sbjct: 138 AEEKVAVL 145

[Close]

BLAST of Bhi10G000090 vs. ExPASy TrEMBL
Match: A0A6J0ZW96 (RING-H2 finger protein ATL57 OS=Herrania umbratica OX=108875 GN=LOC110412688 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.8e-27
Identity = 82/171 (47.95%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 2   NLPSPNLPLEKATTQESSSPP--HSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYI 61
           +LPSP L   +     S+S P   S K SQ  PPF    A+ ++ LL         SIYI
Sbjct: 20  SLPSPPLHHHRPVNTNSTSSPLSSSKKLSQQNPPFDSSMALTIVVLLTALFFMGFFSIYI 79

Query: 62  RSYAE-------RRHSFP---LPHVRLP--RMAAGSSANGVDPAVVGSLPVSAYCCDDKL 121
           R ++E       RR  +    L  + LP  R    +   G+DP  VGSLPV +Y  D K 
Sbjct: 80  RRFSEEPTAHLSRRRRYRGGLLDTLSLPSDRHHVSTPRKGLDPTTVGSLPVYSYHGDAKY 139

Query: 122 QVDCAICLSEFEVEERVKTIPFCQHVFHPECIDTWLFSHVSCPVCRSTQFF 159
           Q+DCAICLSEFE +E VKTIP C+HVFH ECIDTWL SHVSCPVCR T+ F
Sbjct: 140 QIDCAICLSEFEEKECVKTIPCCKHVFHVECIDTWLTSHVSCPVCRGTRLF 190

[Close]

BLAST of Bhi10G000090 vs. ExPASy TrEMBL
Match: A0A061GV29 (RING/U-box superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_041565 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 4.8e-27
Identity = 82/169 (48.52%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 2   NLPSPNLPLEKATTQESSSPP--HSFKFSQLFPPFTLKTAVILLTLLLVFLLFTILSIYI 61
           +LPSP L   + TT  S+S P   S K SQ   PF    A+ ++ LL         SIYI
Sbjct: 20  SLPSPPLHHHRPTTTNSTSSPLSSSKKLSQQNDPFDSSMALTIVVLLTALFFMGFFSIYI 79

Query: 62  RSYAE-------RRHSF---PLPHVRLP--RMAAGSSANGVDPAVVGSLPVSAYCCDDKL 121
           R ++E       RR  +    L  + LP  R    +   G+DP  VGSLPV +Y  D K 
Sbjct: 80  RRFSEEPTAHLSRRRRYRGGSLDTLSLPSDRHHVSTPRKGLDPTTVGSLPVYSYHGDAKY 139

Query: 122 QVDCAICLSEFEVEERVKTIPFCQHVFHPECIDTWLFSHVSCPVCRSTQ 157
           Q+DCAICLSEFE +E VKTIP C+HVFH ECIDTWL SHVSCPVCR T+
Sbjct: 140 QIDCAICLSEFEEKECVKTIPCCEHVFHVECIDTWLTSHVSCPVCRGTR 188

The following BLAST results are available for this feature:

BLAST of Bhi10G000090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G40070.1	1.8e-18	39.60	RING/U-box superfamily protein	[more]
AT2G27940.1	4.0e-18	39.73	RING/U-box superfamily protein	[more]
AT3G16720.1	4.9e-16	38.64	TOXICOS EN LEVADURA 2	[more]
AT3G05200.1	1.9e-15	34.62	RING/U-box superfamily protein	[more]
AT1G72200.1	2.5e-15	35.48	RING/U-box superfamily protein	[more]

BLAST of Bhi10G000090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W571	2.6e-17	39.60	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]
Q9SJJ7	5.7e-17	39.73	RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1	[more]
Q8L9T5	7.0e-15	38.64	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q8H7N9	2.6e-14	35.56	E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q8RXX9	2.6e-14	34.62	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]

BLAST of Bhi10G000090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903383.1	4.1e-57	74.52	PREDICTED: RING-H2 finger protein ATL57-like [Cucumis melo] >KAA0037295.1 RING-H...	[more]
KGN46895.1	5.3e-36	70.31	hypothetical protein Csa_020764 [Cucumis sativus]	[more]
XP_021278965.1	5.8e-27	47.95	RING-H2 finger protein ATL57 [Herrania umbratica]	[more]
EOY33660.1	1.0e-26	48.52	RING/U-box superfamily protein, putative [Theobroma cacao]	[more]
XP_007016041.2	3.8e-26	47.93	PREDICTED: RING-H2 finger protein ATL57 [Theobroma cacao]	[more]

BLAST of Bhi10G000090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T753	2.0e-57	74.52	RING-H2 finger protein ATL57-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4E570	2.0e-57	74.52	RING-H2 finger protein ATL57-like OS=Cucumis melo OX=3656 GN=LOC107992155 PE=4 S...	[more]
A0A0A0KAY2	2.6e-36	70.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149360 PE=4 SV=1	[more]
A0A6J0ZW96	2.8e-27	47.95	RING-H2 finger protein ATL57 OS=Herrania umbratica OX=108875 GN=LOC110412688 PE=...	[more]
A0A061GV29	4.8e-27	48.52	RING/U-box superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_04156...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 111..152 e-value: 1.3E-5 score: 34.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 110..153 e-value: 3.1E-12 score: 46.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 111..153 score: 12.208971
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 79..157 e-value: 2.7E-18 score: 67.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..23
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 21..156
None	No IPR available	PANTHER	PTHR14155:SF263	E3 UBIQUITIN-PROTEIN LIGASE ATL6	coord: 21..156
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 110..153 e-value: 1.0928E-15 score: 65.0239
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 105..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000090	Bhi10M000090	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane