Bhi10G000048 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G000048
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	60S acidic ribosomal protein family
Location	chr10: 1625766 .. 1627303 (+)
RNA-Seq Expression	Bhi10G000048
Synteny	Bhi10G000048

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTTTCAGTGACGGCTCCGATCTCTCTCACTGTTCGTTGCGGCTTCTGTTTCGAACTTTTCCCGAGTATTATTTCTCTTCCCGCTCTTGTTTTTTCCATTGATTTCTTCTATGTAAGTTCTTCTCATTTATGGTGTTATAACATTTGATGTTGTTGAAGCAGAGATGAAGGTAGTCGCTGCATATTTGTTGGCCGTTCTCGGTGGCAACCCCAGCCCCGGACTCGATGATGTGAAGTCTATTCTTAATTCAGGTTCGTCTTTCACAACCTATTTGTCTTGTACTCTTGTACTCTTGTACTTTAGATTTTTTTTTTTTTTTTTTTTTTTGCTACTTTGGTGGTTTTGTTTCTTTTGAAGATAGAGTTGATGTTATAAGCTTTGGAAATTGAAAATGGGCTTTGTTCGATCCGAATGTTTAGGTTAGACTAGTAGTTTGTTTATGATTTAGTTAGGGAGGAGCTGGAAAATAAGTGAAATCTTGAAATATCTGACCTGAAATGATGGGCGCTGTTAGTGAATTTCCGTTGAGATTTAATGGTGGGGTTTTTATGTACAGTTGGGGCTGAGGTGGATGACGATAGGATTGGCCTGCTACTCTCCCAAGTGAAAGGAAAGGATATCACAGAGTTGATAGCCTCTGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGCGGTGCAATCGCCGTCTCCGCCCCTGCCGGCGGTGCCGCTGGTGGTGGTGCAGCACTAGCCGCAGCCGAACAGAAGAAAGAGGAGAAGGTAGAGGAGAAAGAAGAATCCGACGATGTAAGTGTTTAACCCGTCATTCTTAGATTTCACACATGTTCATCTGATCTGTTTTGTTGTATTCTAATCTGTGAAAGACCATGAATAATGGGCCTAAATCTTATGTTCTATCTTTCTGCAGGATATGGGTTTCAGCCTCTTTGACTGAGCGCAACTCATTTGGTGTCGTTATCAGTTAGTGTTTTTAGTTGACTTTCGTTCAAGTTTCCGGGCATTGGTAGCTTGGTAGGGGTTTTCCTTTTTTACTTATTTTGGAACTCAAAATTTTTGATAGATGGAAAGTTCATTTTTCAATTTCAATATTTCAGTAATTACTGTCATTTGACTACTTGTATGATTTATGATTCCCACTGTTTCTTATCTCGCCATTCATGATTCGTTTTGGCTTATGCTAATTTGTATCACTGTTTGTTTTATTGTTTTCACTCTGTGAATGTGCAGTTTGCTGAGAATTAGAATGTAGGTGTTCATCGAGCATATGTTGCTTTTATTAGAATCTATGCATCATGCATTCGTTTGATTCTTCAGTGACCTTTTAAGAGATGTTCGAATGTATTCTGTAGTTGGCCAATAAAATGGTGTTTTGATCTAAAAAATCGTTGCTAAATA

mRNA sequence

ATTCTTTCAGTGACGGCTCCGATCTCTCTCACTGTTCGTTGCGGCTTCTGTTTCGAACTTTTCCCGAAGATGAAGGTAGTCGCTGCATATTTGTTGGCCGTTCTCGGTGGCAACCCCAGCCCCGGACTCGATGATGTGAAGTCTATTCTTAATTCAGTTGGGGCTGAGGTGGATGACGATAGGATTGGCCTGCTACTCTCCCAAGTGAAAGGAAAGGATATCACAGAGTTGATAGCCTCTGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGCGGTGCAATCGCCGTCTCCGCCCCTGCCGGCGGTGCCGCTGGTGGTGGTGCAGCACTAGCCGCAGCCGAACAGAAGAAAGAGGAGAAGGTAGAGGAGAAAGAAGAATCCGACGATGATATGGGTTTCAGCCTCTTTGACTGAGCGCAACTCATTTGGTGTCGTTATCAGTTAGTGTTTTTAGTTGACTTTCGTTCAAGTTTCCGGGCATTGGTAGCTTGTTTGCTGAGAATTAGAATGTAGGTGTTCATCGAGCATATGTTGCTTTTATTAGAATCTATGCATCATGCATTCGTTTGATTCTTCAGTGACCTTTTAAGAGATGTTCGAATGTATTCTGTAGTTGGCCAATAAAATGGTGTTTTGATCTAAAAAATCGTTGCTAAATA

Coding sequence (CDS)

ATGAAGGTAGTCGCTGCATATTTGTTGGCCGTTCTCGGTGGCAACCCCAGCCCCGGACTCGATGATGTGAAGTCTATTCTTAATTCAGTTGGGGCTGAGGTGGATGACGATAGGATTGGCCTGCTACTCTCCCAAGTGAAAGGAAAGGATATCACAGAGTTGATAGCCTCTGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGCGGTGCAATCGCCGTCTCCGCCCCTGCCGGCGGTGCCGCTGGTGGTGGTGCAGCACTAGCCGCAGCCGAACAGAAGAAAGAGGAGAAGGTAGAGGAGAAAGAAGAATCCGACGATGATATGGGTTTCAGCCTCTTTGACTGA

Protein sequence

MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGREKLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD

Homology

[Close]

BLAST of Bhi10G000048 vs. TAIR 10
Match: AT2G27710.1 (60S acidic ribosomal protein family )

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32
Identity = 79/115 (68.70%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVL G  SP   D+K+IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGG     A A    GGG   +AAE KKEEK EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of Bhi10G000048 vs. TAIR 10
Match: AT2G27710.2 (60S acidic ribosomal protein family )

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32
Identity = 79/115 (68.70%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVL G  SP   D+K+IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGG     A A    GGG   +AAE KKEEK EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of Bhi10G000048 vs. TAIR 10
Match: AT2G27710.3 (60S acidic ribosomal protein family )

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32
Identity = 79/115 (68.70%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVL G  SP   D+K+IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGG     A A    GGG   +AAE KKEEK EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of Bhi10G000048 vs. TAIR 10
Match: AT2G27720.1 (60S acidic ribosomal protein family )

HSP 1 Score: 134.8 bits (338), Expect = 4.4e-32
Identity = 78/115 (67.83%), Postives = 86/115 (74.78%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAA+LLAVL G  SP   D+K IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGG     A A    GGG    AAE KKEEK EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of Bhi10G000048 vs. TAIR 10
Match: AT3G44590.2 (60S acidic ribosomal protein family )

HSP 1 Score: 131.3 bits (329), Expect = 4.8e-31
Identity = 77/115 (66.96%), Postives = 90/115 (78.26%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKV AA+LLAVLGGN +P  D++K I+ +VGA+VD + I LLL +V GKDI ELIASGRE
Sbjct: 1   MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGG    +AP+ G  GGGA  AA  +KKE K EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGGVAVSAAPSSG--GGGA--AAPAEKKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of Bhi10G000048 vs. ExPASy Swiss-Prot
Match: O24415 (60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.5e-34
Identity = 82/115 (71.30%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKV+AAYLLAVLGGN SP  DDVKSIL SVGAE D++++  LL+++K KDITE+IA+GRE
Sbjct: 1   MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           +L+SVPSGGGAI + APA  A  GG A  A E KKEEKVEEKEESD+DMGFSLFD
Sbjct: 61  RLSSVPSGGGAIDMGAPA--AVAGGGAAPAEEAKKEEKVEEKEESDEDMGFSLFD 113

[Close]

BLAST of Bhi10G000048 vs. ExPASy Swiss-Prot
Match: P46252 (60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3)

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-32
Identity = 84/115 (73.04%), Postives = 94/115 (81.74%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MK VAAYLLAVL GN SP  DD+ +IL SVG EVD++++ LLLSQ+ GKDITELIA+GRE
Sbjct: 1   MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           K ASVP GGG +AV+A A   A GGAA  AAE KKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KFASVPCGGGGVAVAAAA--PAAGGAA-PAAEAKKEEKVEEKEESDDDMGFSLFD 112

[Close]

BLAST of Bhi10G000048 vs. ExPASy Swiss-Prot
Match: P41099 (60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-32
Identity = 83/115 (72.17%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKV+AA+LLA+LGGN SP  +D+KSIL SVGA+ DDD+I LLLSQVKGKDITELIASGRE
Sbjct: 1   MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           +LASVPSGGG +AV+A AGG  G   A AA E KKEEK E  EESD+++GFSLFD
Sbjct: 61  RLASVPSGGG-VAVAAAAGGGGGDAPAAAAEEPKKEEKSE--EESDEELGFSLFD 112

[Close]

BLAST of Bhi10G000048 vs. ExPASy Swiss-Prot
Match: Q9SLF7 (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-31
Identity = 79/115 (68.70%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVL G  SP   D+K+IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGG     A A    GGG   +AAE KKEEK EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of Bhi10G000048 vs. ExPASy Swiss-Prot
Match: P51407 (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 6.2e-31
Identity = 78/115 (67.83%), Postives = 86/115 (74.78%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAA+LLAVL G  SP   D+K IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGG     A A    GGG    AAE KKEEK EEKEESDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of Bhi10G000048 vs. NCBI nr
Match: XP_038901119.1 (60S acidic ribosomal protein P2B-like [Benincasa hispida])

HSP 1 Score: 206.8 bits (525), Expect = 9.7e-50
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of Bhi10G000048 vs. NCBI nr
Match: XP_023512871.1 (60S acidic ribosomal protein P2B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 105/115 (91.30%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGN SPGLDDVK ILNSVGAEVD+DRI  LLSQVKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGGA+ ++APAGGAAGGGAA AAAEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAVGIAAPAGGAAGGGAAAAAAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of Bhi10G000048 vs. NCBI nr
Match: KAG6570492.1 (60S acidic ribosomal protein P2B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.1 bits (479), Expect = 2.1e-44
Identity = 105/115 (91.30%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGN SPGLDDVK ILNSVGAEVD+DRI  LLSQVKGKDITELIASGRE
Sbjct: 70  MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 129

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGGA+ ++APAGGAAGGGAA AAAEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 130 KLASVPSGGGAVGIAAPAGGAAGGGAAPAAAEQKKEEKVEEKEESDDDMGFSLFD 184

[Close]

BLAST of Bhi10G000048 vs. NCBI nr
Match: KAG7010354.1 (60S acidic ribosomal protein P2B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189.1 bits (479), Expect = 2.1e-44
Identity = 105/115 (91.30%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGN SPGLDDVK ILNSVGAEVD+DRI  LLSQVKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGGA+ ++APAGGAAGGGAA AAAEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAVGIAAPAGGAAGGGAAPAAAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of Bhi10G000048 vs. NCBI nr
Match: XP_022986046.1 (60S acidic ribosomal protein P2B-like [Cucurbita maxima])

HSP 1 Score: 187.6 bits (475), Expect = 6.1e-44
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGN SPGLDDVK ILNSVGAEVD+DRI  LLSQVKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGGA+ ++APAGGAAGGGAA AA EQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAVGIAAPAGGAAGGGAAPAAVEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of Bhi10G000048 vs. ExPASy TrEMBL
Match: A0A6J1J9Z4 (60S acidic ribosomal protein P2B-like OS=Cucurbita maxima OX=3661 GN=LOC111483902 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.0e-44
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGN SPGLDDVK ILNSVGAEVD+DRI  LLSQVKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGGA+ ++APAGGAAGGGAA AA EQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAVGIAAPAGGAAGGGAAPAAVEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of Bhi10G000048 vs. ExPASy TrEMBL
Match: A0A6J1FYH3 (60S acidic ribosomal protein P2B-like OS=Cucurbita moschata OX=3662 GN=LOC111448674 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.0e-44
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGN SPGLDDVK ILNSVGAEVD+DRI  LLSQVKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGGA+ ++APAGG AGGGAA AAAEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAVGIAAPAGGVAGGGAAPAAAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of Bhi10G000048 vs. ExPASy TrEMBL
Match: A0A6J1DJB9 (60S acidic ribosomal protein P2B-like OS=Momordica charantia OX=3673 GN=LOC111020580 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-43
Identity = 102/115 (88.70%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGN SPG DDVK+ILNSVG EVD+DRI  LLSQVKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGADDVKNILNSVGVEVDEDRIESLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGGA+AV+APAGGAAGGGAA AAAE+KKEEKVEEKE+SDDD+GFSLFD
Sbjct: 61  KLASVPSGGGAVAVAAPAGGAAGGGAAPAAAEEKKEEKVEEKEDSDDDLGFSLFD 115

[Close]

BLAST of Bhi10G000048 vs. ExPASy TrEMBL
Match: A0A0A0KGP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151730 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-43
Identity = 103/115 (89.57%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGN SPG DDVKSILNSVGAE+D++RI LLL++VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGGAIAVSA AGGA GGGAA A AEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of Bhi10G000048 vs. ExPASy TrEMBL
Match: A0A5A7SR49 (60S acidic ribosomal protein P2B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00400 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.3e-43
Identity = 102/115 (88.70%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60
           MKVVAAYLLAVLGGN SPG+DDVK+ILNSVG E+D++RI LLLS+VKGKD+TELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSLFD 116
           KLASVPSGGGAIAVSA AGGAAGGGAA A AEQKKEEKVEEKEESDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSLFD 115

The following BLAST results are available for this feature:

BLAST of Bhi10G000048 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27710.1	1.2e-32	68.70	60S acidic ribosomal protein family	[more]
AT2G27710.2	1.2e-32	68.70	60S acidic ribosomal protein family	[more]
AT2G27710.3	1.2e-32	68.70	60S acidic ribosomal protein family	[more]
AT2G27720.1	4.4e-32	67.83	60S acidic ribosomal protein family	[more]
AT3G44590.2	4.8e-31	66.96	60S acidic ribosomal protein family	[more]

BLAST of Bhi10G000048 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24415	3.5e-34	71.30	60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1	[more]
P46252	1.1e-32	73.04	60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3	[more]
P41099	2.5e-32	72.17	60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1	[more]
Q9SLF7	1.6e-31	68.70	60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 ...	[more]
P51407	6.2e-31	67.83	60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 ...	[more]

BLAST of Bhi10G000048 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901119.1	9.7e-50	100.00	60S acidic ribosomal protein P2B-like [Benincasa hispida]	[more]
XP_023512871.1	1.2e-44	91.30	60S acidic ribosomal protein P2B-like [Cucurbita pepo subsp. pepo]	[more]
KAG6570492.1	2.1e-44	91.30	60S acidic ribosomal protein P2B, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG7010354.1	2.1e-44	91.30	60S acidic ribosomal protein P2B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022986046.1	6.1e-44	90.43	60S acidic ribosomal protein P2B-like [Cucurbita maxima]	[more]

BLAST of Bhi10G000048 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J9Z4	3.0e-44	90.43	60S acidic ribosomal protein P2B-like OS=Cucurbita maxima OX=3661 GN=LOC11148390...	[more]
A0A6J1FYH3	3.0e-44	90.43	60S acidic ribosomal protein P2B-like OS=Cucurbita moschata OX=3662 GN=LOC111448...	[more]
A0A6J1DJB9	2.5e-43	88.70	60S acidic ribosomal protein P2B-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A0A0KGP6	2.5e-43	89.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151730 PE=3 SV=1	[more]
A0A5A7SR49	3.3e-43	88.70	60S acidic ribosomal protein P2B-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..108
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 18..114 e-value: 1.5E-24 score: 86.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..115
None	No IPR available	PANTHER	PTHR21141:SF83	60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE	coord: 2..115
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..59 e-value: 2.1E-25 score: 90.6
IPR044076	Ribosomal protein P2	PANTHER	PTHR21141	60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	coord: 2..115
IPR044076	Ribosomal protein P2	CDD	cd05833	Ribosomal_P2	coord: 1..115 e-value: 9.66481E-36 score: 116.209
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 2..115 score: 16.28857

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000048	Bhi10M000048	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002182	cytoplasmic translational elongation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome