Bhi09G002844 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G002844
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	RAB GTPase homolog A1F
Location	chr9: 87842964 .. 87845521 (-)
RNA-Seq Expression	Bhi09G002844
Synteny	Bhi09G002844

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAAACACAAAAATCTCGTTGAATACGTGGTGTGAATTAGATACATCTCAGTTGAATTTGTGCACTAATATAAATAAAACACAATTCGTAAGGATAGAATGAAAAATAATTCAAAATAGAAGGACTGAAATAGAAATTTTAAAAGAAGTATGAGAGGTAAGATTTAAACCTAAAATGTTTGGATATGTTAAAGGAAAAGAAGGAGATTGCTACAAAAAAGAAGCCCAAGTCCGTTACTAAGCCCAGAAGCAGCGGAATGTTGAAGATGAATCAACCCATTTCGCCGTAACGTTGTGACTGATCGTCTTCAGCAATTTCAAAACCTCTCTGTTTTCTTATGCCTTGGAGCGCCACCTGCTGATCCATTTCTTCAGACCCATCGAATTCCAGAGTCATCGGATCGGACCTGAATAAGTATGGCAGCGTATAGAACGGACGACGATTACGATTACCTCTTTAAAGTGGTTCTCATCGGTGACTCGGGAGTGGGCAAATCCAATCTTCTCTCGAGGTTTACGCGTAATGAGTTCAGTCTTGAATCCAAATCCACAATCGGTGTTGAATTCGCTACTCGGAGTATTCGGGTTGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCCGGACAAGAAAGGTTTGTCAACGAGTTCTTTTTACTTCCATGATTCTGACGGATTCTGGCATTGTCTTGGTGTGGATCTTGATCATTTTATTTTCTGTGTGTTTATTGAGATCTAATCCTGTAATTTAAGATTTTGACGTTTAACTGAATTGTTAGGAAAGGTGGGGAGGTGGGATTTATAGGGCTTTTGAGTGTGTTCTGTTGTTGAGGATCTGAGAATTAAGTAGCTTTCAGATATTGATTATCAGGGATTGCTTGCCTGTTGAGATGATGATCGCGTTATTTATCTGTTGCAATTGGAGTTTCTGGGATTACGTTTTTACTTTTTAGATACCTTCAGTCTCAAGAAATTTGATACGAGTTTTGGAGTTGGTGAATTTTGATCGGTAATGGGATGTCACCATCGATTTTCACGTGGGACCTTATTTCCTAGAGTATTCTGAATTCTGTGTTTAAAATAATCATCTGGATCTGATAAGAGAGGAAGGCTTGTTTATGCCCAGACAAAGTTTGAATTGCATTGTTATAGAAATTTATGAAGTAGTGTTGGAATTTCGGCCGAGTTTCTTCATGGATGCCATGCCAGCACTTTCTGTTAAATGAAATTGTTTTTCTTTCCCTTGGAGTGTAGAGTGGTTTTGGCTCTGTGCATTTCCATTTCTAGTCAGCCTGTATTGATTTGTTTGTTTCCTATTACCATTTATTCACGACATGATTTTTGTATCTAATTCCTGGATCATATAGAAATAAGAAAGAGCCTTCTAACATGTTTAATTCCAACATTGAGGTTCGTACCAAAATGTAGTATGCAAGGCTTGTTTTTCTTTTGGTGTGTGTGTATTTTTGGCAATGGTTAAGCCTGGACGAGTAATACTGAAGACTTTAAAGTGTTGTAGAGATTTCATGATTTGCACTTCAAAAGAAAGACCCTTTGTGAAAAAGTCGGTCATTTTCATTTTATTCGGTATTGCTTGTTTCATTTGTCGTGGTTTATCATCAGGGTAAGATATGAAACTATTGTGAACCATCTCTTATATGCTTCTTTTTGCCAGATACCGTGCAATCACAAGTGCATACTATCGAGGAGCTGTTGGTGCATTGCTTGTCTATGATGTCACCCGACATGTGACATTCGAAAATGTTGAGAGATGGTTGAAAGAGCTTAGAGATCACACCGACTCCAATATTGTGATAATGCTAGTTGGCAACAAGGCAGACTTGCGACATCTGCGTGCTGTTTCAACTGAGGATGCCAAGGCCTTTGCAGAGAAGGAGAACACATTCTTCATGGAGACATCTGCCCTTGAGTCTCTGAATGTCGAGAATGCTTTTACCGAAGTGCTAACCCAAATCTATCGTGTAGTCTGCAGAAAAGCGCTCGAGATTGGGGAGGATCCCGCGGCATTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCTGCAGTGAAGAAAGTTGGTTGCTGCTCTTCATGATATCATCATTTGAATGTGAGGTACATCATCAAAAGGAGTAAAAGGATGAGTTCGTTATGCTATGTCTTGAATTTCAACTCCTGGATTTGCTCAACAAACATTTACTTTATGGTCATTTTTTATGGTGCTGGAGCTTCTCGGAGGGTTGGATTCATGTTTGGAGTCTTTTGAAATTGACACCTTTTCTTATTGTCAATTCCGTGTACTTTCTTGTCCGAGCTCACTCTCTTATATTGTTTTAATTTTTGTAATGCCCCATAGTTTTAATTGTATCAGATTGTCCTAGATAGAGAGATCTGTTAAACTGAAGTTGTATGTAGGTAAATGTTCAGTTCAATGGGAGCAGAATTTTTTAGATTCTTCAATTTTGCACGATATGCCAGGAGTATGTTATATTACTCCAAAGAATTCACTTTGCTGACTAAGCTTCCCTTCCCAAAACCAAAC

mRNA sequence

GTCAAACACAAAAATCTCGTTGAATACGTGGTGTGAATTAGATACATCTCAGTTGAATTTGTGCACTAATATAAATAAAACACAATTCGTAAGGATAGAATGAAAAATAATTCAAAATAGAAGGACTGAAATAGAAATTTTAAAAGAAGTATGAGAGGTAAGATTTAAACCTAAAATGTTTGGATATGTTAAAGGAAAAGAAGGAGATTGCTACAAAAAAGAAGCCCAAGTCCGTTACTAAGCCCAGAAGCAGCGGAATGTTGAAGATGAATCAACCCATTTCGCCGTAACGTTGTGACTGATCGTCTTCAGCAATTTCAAAACCTCTCTGTTTTCTTATGCCTTGGAGCGCCACCTGCTGATCCATTTCTTCAGACCCATCGAATTCCAGAGTCATCGGATCGGACCTGAATAAGTATGGCAGCGTATAGAACGGACGACGATTACGATTACCTCTTTAAAGTGGTTCTCATCGGTGACTCGGGAGTGGGCAAATCCAATCTTCTCTCGAGGTTTACGCGTAATGAGTTCAGTCTTGAATCCAAATCCACAATCGGTGTTGAATTCGCTACTCGGAGTATTCGGGTTGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCCGGACAAGAAAGATACCGTGCAATCACAAGTGCATACTATCGAGGAGCTGTTGGTGCATTGCTTGTCTATGATGTCACCCGACATGTGACATTCGAAAATGTTGAGAGATGGTTGAAAGAGCTTAGAGATCACACCGACTCCAATATTGTGATAATGCTAGTTGGCAACAAGGCAGACTTGCGACATCTGCGTGCTGTTTCAACTGAGGATGCCAAGGCCTTTGCAGAGAAGGAGAACACATTCTTCATGGAGACATCTGCCCTTGAGTCTCTGAATGTCGAGAATGCTTTTACCGAAGTGCTAACCCAAATCTATCGTGTAGTCTGCAGAAAAGCGCTCGAGATTGGGGAGGATCCCGCGGCATTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCTGCAGTGAAGAAAGTTGGTTGCTGCTCTTCATGATATCATCATTTGAATGTGAGGTACATCATCAAAAGGAGTAAAAGGATGAGTTCGTTATGCTATGTCTTGAATTTCAACTCCTGGATTTGCTCAACAAACATTTACTTTATGGTCATTTTTTATGGTGCTGGAGCTTCTCGGAGGGTTGGATTCATGTTTGGAGTCTTTTGAAATTGACACCTTTTCTTATTGTCAATTCCGTGTACTTTCTTGTCCGAGCTCACTCTCTTATATTGTTTTAATTTTTGTAATGCCCCATAGTTTTAATTGTATCAGATTGTCCTAGATAGAGAGATCTGTTAAACTGAAGTTGTATGTAGGTAAATGTTCAGTTCAATGGGAGCAGAATTTTTTAGATTCTTCAATTTTGCACGATATGCCAGGAGTATGTTATATTACTCCAAAGAATTCACTTTGCTGACTAAGCTTCCCTTCCCAAAACCAAAC

Coding sequence (CDS)

ATGGCAGCGTATAGAACGGACGACGATTACGATTACCTCTTTAAAGTGGTTCTCATCGGTGACTCGGGAGTGGGCAAATCCAATCTTCTCTCGAGGTTTACGCGTAATGAGTTCAGTCTTGAATCCAAATCCACAATCGGTGTTGAATTCGCTACTCGGAGTATTCGGGTTGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCCGGACAAGAAAGATACCGTGCAATCACAAGTGCATACTATCGAGGAGCTGTTGGTGCATTGCTTGTCTATGATGTCACCCGACATGTGACATTCGAAAATGTTGAGAGATGGTTGAAAGAGCTTAGAGATCACACCGACTCCAATATTGTGATAATGCTAGTTGGCAACAAGGCAGACTTGCGACATCTGCGTGCTGTTTCAACTGAGGATGCCAAGGCCTTTGCAGAGAAGGAGAACACATTCTTCATGGAGACATCTGCCCTTGAGTCTCTGAATGTCGAGAATGCTTTTACCGAAGTGCTAACCCAAATCTATCGTGTAGTCTGCAGAAAAGCGCTCGAGATTGGGGAGGATCCCGCGGCATTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCTGCAGTGAAGAAAGTTGGTTGCTGCTCTTCATGA

Protein sequence

MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS

Homology

[Close]

BLAST of Bhi09G002844 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 407.1 bits (1045), Expect = 8.6e-114
Identity = 204/217 (94.01%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IM VGNKADLRHLRAVSTEDAKAFAE+ENTFFMETSALES+NVENAFTEVL+QIYRVV R
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+IG+DPAALPKGQTINVG+KDDVSAVKKVGCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of Bhi09G002844 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-109
Identity = 196/217 (90.32%), Postives = 209/217 (96.31%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT++NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAKAFAE+ENTFFMETSALE+LNVENAFTEVL+QIYRV  +
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+IG+D   LPKGQ+INVG+KDDVS VKKVGCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of Bhi09G002844 vs. TAIR 10
Match: AT1G28550.1 (RAB GTPase homolog A1I )

HSP 1 Score: 378.6 bits (971), Expect = 3.3e-105
Identity = 188/218 (86.24%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYR +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRA+STE+AKAFAE+ENTFFMETSALE++NV+NAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KALE G+DP  ALPKGQ INVG +DD+SAVKK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

[Close]

BLAST of Bhi09G002844 vs. TAIR 10
Match: AT2G33870.1 (RAB GTPase homolog A1H )

HSP 1 Score: 371.3 bits (952), Expect = 5.2e-103
Identity = 184/218 (84.40%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M  Y+ +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL HLRA+STE+ K FAE+ENTFFMETSALE++NVENAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+ G+DP  ALPKGQ INVG++DDVSAVKK GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

[Close]

BLAST of Bhi09G002844 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 369.0 bits (946), Expect = 2.6e-102
Identity = 178/216 (82.41%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYR DDDYDYLFK+VLIGDSGVGKSNLLSRFTRNEFS+ESKSTIGVEFATRS+ VD+K
Sbjct: 1   MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           I+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+TRH+TFENVERWLKELRDHTD+N+V
Sbjct: 61  IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAV TE+A++F+E+EN FFMETSAL++ NVE AFT VLTQIYRV+ R
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCS 217
           KAL+   DP +LPKGQTI++GNKDDV+AVK  GCCS
Sbjct: 181 KALDGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCCS 216

[Close]

BLAST of Bhi09G002844 vs. ExPASy Swiss-Prot
Match: Q9FJH0 (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 1.2e-112
Identity = 204/217 (94.01%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IM VGNKADLRHLRAVSTEDAKAFAE+ENTFFMETSALES+NVENAFTEVL+QIYRVV R
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+IG+DPAALPKGQTINVG+KDDVSAVKKVGCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of Bhi09G002844 vs. ExPASy Swiss-Prot
Match: Q40521 (Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.9e-110
Identity = 200/214 (93.46%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 4   YRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVK 63
           YR +DDYDYLFK+VLIGDSGVGKSNLLSRF+RNEF+LESKSTIGVEFATRSIRVDDKIVK
Sbjct: 5   YRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVK 64

Query: 64  AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
           AQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKELRDHTD NIVIML
Sbjct: 65  AQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIML 124

Query: 124 VGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKAL 183
           VGNKADLRHLRAVSTEDAKAFAE+ENTFFMETSALESLNVENAFTEVLT+IY+VVCRKAL
Sbjct: 125 VGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKAL 184

Query: 184 EIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           E+G+DPAALPKGQTINVG KDDVSAVKKVGCCSS
Sbjct: 185 EVGDDPAALPKGQTINVG-KDDVSAVKKVGCCSS 217

[Close]

BLAST of Bhi09G002844 vs. ExPASy Swiss-Prot
Match: Q9LK99 (Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.1e-108
Identity = 196/217 (90.32%), Postives = 209/217 (96.31%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT++NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAKAFAE+ENTFFMETSALE+LNVENAFTEVL+QIYRV  +
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+IG+D   LPKGQ+INVG+KDDVS VKKVGCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of Bhi09G002844 vs. ExPASy Swiss-Prot
Match: Q9S810 (Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 4.6e-104
Identity = 188/218 (86.24%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYR +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRA+STE+AKAFAE+ENTFFMETSALE++NV+NAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KALE G+DP  ALPKGQ INVG +DD+SAVKK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

[Close]

BLAST of Bhi09G002844 vs. ExPASy Swiss-Prot
Match: Q1PEX3 (Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.4e-102
Identity = 184/218 (84.40%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M  Y+ +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL HLRA+STE+ K FAE+ENTFFMETSALE++NVENAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KAL+ G+DP  ALPKGQ INVG++DDVSAVKK GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

[Close]

BLAST of Bhi09G002844 vs. ExPASy TrEMBL
Match: A0A5D3DVT8 (Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001250 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KALEIGEDPAALPKGQTINVGNKDDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of Bhi09G002844 vs. ExPASy TrEMBL
Match: E5GBG0 (GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KALEIGEDPAALPKGQTINVGNKDDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of Bhi09G002844 vs. ExPASy TrEMBL
Match: A0A0A0L041 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628900 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KALEIGEDPAALPKGQTINVGNKDDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of Bhi09G002844 vs. ExPASy TrEMBL
Match: A0A1S3CJW4 (ras-related protein RABA1f OS=Cucumis melo OX=3656 GN=LOC103501795 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KALEIGEDPAALPKGQTINVGNKDDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of Bhi09G002844 vs. ExPASy TrEMBL
Match: A0A6J1CG72 (ras-related protein RABA1f OS=Momordica charantia OX=3673 GN=LOC111010513 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAKAFAE+ENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 218
           KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217

The following BLAST results are available for this feature:

BLAST of Bhi09G002844 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60860.1	8.6e-114	94.01	RAB GTPase homolog A1F	[more]
AT3G15060.1	2.2e-109	90.32	RAB GTPase homolog A1G	[more]
AT1G28550.1	3.3e-105	86.24	RAB GTPase homolog A1I	[more]
AT2G33870.1	5.2e-103	84.40	RAB GTPase homolog A1H	[more]
AT4G18430.1	2.6e-102	82.41	RAB GTPase homolog A1E	[more]

BLAST of Bhi09G002844 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJH0	1.2e-112	94.01	Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1	[more]
Q40521	1.9e-110	93.46	Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1	[more]
Q9LK99	3.1e-108	90.32	Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1	[more]
Q9S810	4.6e-104	86.24	Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1	[more]
Q1PEX3	7.4e-102	84.40	Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1	[more]

BLAST of Bhi09G002844 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DVT8	1.6e-115	99.08	Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
E5GBG0	1.6e-115	99.08	GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0L041	1.6e-115	99.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628900 PE=4 SV=1	[more]
A0A1S3CJW4	1.6e-115	99.08	ras-related protein RABA1f OS=Cucumis melo OX=3656 GN=LOC103501795 PE=4 SV=1	[more]
A0A6J1CG72	2.1e-115	99.08	ras-related protein RABA1f OS=Momordica charantia OX=3673 GN=LOC111010513 PE=4 S...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 55.2 coord: 152..174 score: 40.99 coord: 55..77 score: 53.32 coord: 117..130 score: 55.15 coord: 37..53 score: 36.77
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 8.1E-114 score: 394.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 3.5E-30 score: 116.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..216 e-value: 9.0E-10 score: 48.5
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..215
None	No IPR available	PANTHER	PTHR47979:SF21	RAS-RELATED PROTEIN RABA1F-LIKE	coord: 1..215
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..215 score: 36.150829
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..179 score: 9.720835
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 5.07376E-132 score: 366.115
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 3.0E-12 score: 37.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 7.2E-63 score: 211.0
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..217 score: 17.278093
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..215 e-value: 5.5E-72 score: 243.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 4.0E-40 score: 135.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M002844	Bhi09M002844	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding