Bhi09G002676 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G002676
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Uncharacterised protein family SERF
Location	chr9: 83302201 .. 83302925 (-)
RNA-Seq Expression	Bhi09G002676
Synteny	Bhi09G002676

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGGAGGCAATGGCCAGAAGTCTAAAATGGCCCGGGAGAGAAACCTGGAGAAACAAAAGTCATCAAGAGGTAATCAATTCAACCTGCCACTCAATTCTTTCAGTTTGGCTTCTCAGAAAATGATTTGCAAAGACCATGTTATTGCTCTTGATTCCTCTTTCTGTCCTCCCTTAGCCTTTAGCTTGAGTAATGGAAAGTTTAATTAGAAGATTAGTAATGCAAAATATACGATATACAAACATAAATTTCATTACTAGATCAACCAAATCTAGCTGCTTTGCTGATTTAGATGTCAAGTATGATAACTAAAATGATTATTACTGTAACCCTTTTTCTTTTTATTTCTTCTTTGTGGGTTTTTGATGATTTCCCGTGTATAAAGTTCAGAGTTGATTATGACTGTAATAATTTCCACAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGGTAAAATTCTGAAATTTTATGTACCTAATTTGTTTCCTTGAGAGGGACAAATATTGAATTAATAGTGATGATTACTCCTTGTTTAGCTTGTTGATTGAAACTTAAAAGTGTTCATGAAAGTGGGTTATTGTGAATTGTTGCAGTGCAAGGTATGCATGCAGACATTTATATGTACAACTACAGAGGTGAAGTGCAGGGAACATGCAGAAGCAAGGCACCCAAAATCTGATGTATATGCTTGTTTTCCTCATCTTAAGAAATGA

mRNA sequence

ATGGGCGGAGGCAATGGCCAGAAGTCTAAAATGGCCCGGGAGAGAAACCTGGAGAAACAAAAGTCATCAAGAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGTGCAAGGTATGCATGCAGACATTTATATGTACAACTACAGAGGTGAAGTGCAGGGAACATGCAGAAGCAAGGCACCCAAAATCTGATGTATATGCTTGTTTTCCTCATCTTAAGAAATGA

Coding sequence (CDS)

ATGGGCGGAGGCAATGGCCAGAAGTCTAAAATGGCCCGGGAGAGAAACCTGGAGAAACAAAAGTCATCAAGAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGTGCAAGGTATGCATGCAGACATTTATATGTACAACTACAGAGGTGAAGTGCAGGGAACATGCAGAAGCAAGGCACCCAAAATCTGATGTATATGCTTGTTTTCCTCATCTTAAGAAATGA

Protein sequence

MGGGNGQKSKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSDVYACFPHLKK

Homology

[Close]

BLAST of Bhi09G002676 vs. TAIR 10
Match: AT2G23090.1 (Uncharacterised protein family SERF )

HSP 1 Score: 127.1 bits (318), Expect = 6.1e-30
Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 1  MGGGNGQKSKMARERNLEKQKSS-RGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHA 60
          MGGGN QKS MAR +NLEK K++ +GSQLE NKKAM+IQCKVCMQTFICTT+EVKCREHA
Sbjct: 1  MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 61 EARHPKSDVYACFPHLKK 78
          EA+HPK+DV ACFPHLKK
Sbjct: 61 EAKHPKADVVACFPHLKK 78

[Close]

BLAST of Bhi09G002676 vs. ExPASy Swiss-Prot
Match: O64818 (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana OX=3702 GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 8.6e-29
Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 1  MGGGNGQKSKMARERNLEKQKSS-RGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHA 60
          MGGGN QKS MAR +NLEK K++ +GSQLE NKKAM+IQCKVCMQTFICTT+EVKCREHA
Sbjct: 1  MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 61 EARHPKSDVYACFPHLKK 78
          EA+HPK+DV ACFPHLKK
Sbjct: 61 EAKHPKADVVACFPHLKK 78

[Close]

BLAST of Bhi09G002676 vs. ExPASy TrEMBL
Match: A0A5A7VFF4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002860 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGGGNGQKSKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQK+KMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSDVYACFPHLKK 78
          ARHPKSDVYACFPHLKK
Sbjct: 61 ARHPKSDVYACFPHLKK 77

[Close]

BLAST of Bhi09G002676 vs. ExPASy TrEMBL
Match: A0A1S3BU86 (uncharacterized protein At2g23090-like OS=Cucumis melo OX=3656 GN=LOC103493591 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGGGNGQKSKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQK+KMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSDVYACFPHLKK 78
          ARHPKSDVYACFPHLKK
Sbjct: 61 ARHPKSDVYACFPHLKK 77

[Close]

BLAST of Bhi09G002676 vs. ExPASy TrEMBL
Match: A0A0A0KZW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642360 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.2e-34
Identity = 75/77 (97.40%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGGGNGQKSKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQK+KMARERNLEKQK+SRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKASRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSDVYACFPHLKK 78
          ARHPKSDVYACFPHLKK
Sbjct: 61 ARHPKSDVYACFPHLKK 77

[Close]

BLAST of Bhi09G002676 vs. ExPASy TrEMBL
Match: A0A6P3ZUE5 (uncharacterized protein At2g23090-like isoform X1 OS=Ziziphus jujuba OX=326968 GN=LOC107420583 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.7e-33
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MGGGNGQKSKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
           MGGGNGQKSKMARERNLEKQK +RGSQLE+NKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 65  MGGGNGQKSKMARERNLEKQKQNRGSQLESNKKAMTIQCKVCMQTFICTTTEVKCREHAE 124

Query: 61  ARHPKSDVYACFPHLKK 78
           A+HPKSDVYACFPHLKK
Sbjct: 125 AKHPKSDVYACFPHLKK 141

[Close]

BLAST of Bhi09G002676 vs. ExPASy TrEMBL
Match: A0A6P4BN08 (uncharacterized protein At2g23090-like isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107433735 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.7e-33
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MGGGNGQKSKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60
          MGGGNGQKSKMARERNLEKQK +RGSQLE+NKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKSKMARERNLEKQKQNRGSQLESNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 61 ARHPKSDVYACFPHLKK 78
          A+HPKSDVYACFPHLKK
Sbjct: 61 AKHPKSDVYACFPHLKK 77

The following BLAST results are available for this feature:

BLAST of Bhi09G002676 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23090.1	6.1e-30	80.77	Uncharacterised protein family SERF	[more]

BLAST of Bhi09G002676 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64818	8.6e-29	80.77	Uncharacterized protein At2g23090 OS=Arabidopsis thaliana OX=3702 GN=At2g23090 P...	[more]

BLAST of Bhi09G002676 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VFF4	1.4e-34	98.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BU86	1.4e-34	98.70	uncharacterized protein At2g23090-like OS=Cucumis melo OX=3656 GN=LOC103493591 P...	[more]
A0A0A0KZW6	3.2e-34	97.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642360 PE=4 SV=1	[more]
A0A6P3ZUE5	2.7e-33	94.81	uncharacterized protein At2g23090-like isoform X1 OS=Ziziphus jujuba OX=326968 G...	[more]
A0A6P4BN08	2.7e-33	94.81	uncharacterized protein At2g23090-like isoform X2 OS=Ziziphus jujuba OX=326968 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026939	ZNF706/At2g23090 superfamily	GENE3D	4.10.1050.10		coord: 1..77 e-value: 1.3E-33 score: 117.2
IPR007513	Uncharacterised protein family SERF, N-terminal	PFAM	PF04419	4F5	coord: 3..35 e-value: 1.8E-7 score: 31.9
IPR039438	At2g23090-like, zinc-binding domain	PFAM	PF12907	zf-met2	coord: 38..75 e-value: 1.9E-20 score: 72.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	PANTHER	PTHR33788:SF14	SUBFAMILY NOT NAMED	coord: 1..77
None	No IPR available	SUPERFAMILY	118359	Expressed protein At2g23090/F21P24.15	coord: 1..76
IPR039713	At2g23090-like	PANTHER	PTHR33788	OS07G0114300 PROTEIN	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M002676	Bhi09M002676	mRNA