Bhi09G002596 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G002596
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	BRISC and BRCA1-A complex member 1
Location	chr9: 81013828 .. 81016718 (+)
RNA-Seq Expression	Bhi09G002596
Synteny	Bhi09G002596

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCTTTCTCACTAAGTGGAATTACGCTGAGAGATATAAATATAACTCGATCGTCCACGACGCTGTGCAATCGTATCTACCGTAAACTGATAAACGGCTCCTTCTACGTGCCCCCAAAAAAGAAACAGTAAATCCCCAATTCAATTTCTGAAATACCAAAAATCGACGCCGAAGAACCATGGAGGCAATCGAAGTTGAGAGAGGAGGAAGCGGATACTCACTGAAACCATCGCGATTAAACAGCGAAGACATTCTCTTCTGCATAGATGTGAACCCTGAATCTTCGGTTGAGATCAAAACCACCGGCTCTAATGGACGACCCATCACCAGAATGGACTCCATTAAGCAAGCAATTCTTCTCTTCGTCCACGCCAAACTCTCCATGAATCCTGACCACCGATTTGCTTTCACCACCGTCGCCAAATCTGCCATTTGGGTAATCCCTCCCATCACCTATTTCTTCTTGATTTTGCTTTCTTCATTCAGAAATGTAGGTTTTGGATTACGGGATTTCTGGGGTTTCTGGGGTTTCTGTCTGTTTAAGGCAAATTTCAATTTCTAGGGGAGTATATATTTCCTCATCTTCTTGCTTGCATATTAGCTTTTCTTCATCCTTCTACTCATTTACCTAGATTGGGGAACTCAAATCCTAACAGCCCACCTAAAGATATAAAACAACTTCATGTGGTTTAGGAGAAATAATGACTGTTCTTTGATTGGAAACTCGTAGTTTAAATTCTTTTGCAGTTTCGAGATTGTATGTAGCATGTGTTGTAGACTATACCTGAGTTCTCTTTTTCTCCTTATCCAAAAATCTTATTTAATTGCTTATTGAGGGATTCTATTTCGTAAATGATCACTCCTCCGGCTTGGCTTAGTTAAAGTCAAATGCCTTCTAGTTTTCAGCCTGGGAACTTAAAGTTTTTGGTTTGTGTGAATGTGATTAAGCACTTGGGTCCTCCTTTCTCGTTCAAACTGTGGGGCAGAAAATGAAAAGGTCGGTTATTAGTCCACCTTGTTTGTCCAAATTTGAATAGAAGAATTACACAAACTTGCTGATCCAACCAGTATCTAATTTTCTACTTATAGTTGAAGTATATAGCACAAACTGTCTGATCTAACTAGTATCCATTTTGCAACTTTGATTTGAAGAATATAAGTTGACCGTGCTGATCCAACATTTTCCCTTTCACTTTGTTAACTCTCACTAAGAGCTGGTGTTTTGATATTGTCAATATAATGTTGATATATGCTCCAGTATTAGAATTAGATTGTGAAAGACTACAATACTGATGGTATTTTAAGGGAAAAGAGAGAAGATAATATCTCCAACTATCCTTCTTCTTGAGTCTATTTCTTTTGGAGACGAGCATGGAGATTCTGGTTGCTTGCAGCTGATTTCTCCTTTAACCATTGTTACTTGAGTTCTTAACTCTCGCCCTCTATGATTGACTGCTAACATACAGAAGAAGAAAACTGGAAAACCCTGAACCTTAGTTGTCTGCACTAACCACGCAAGAAAGACTGAGCTTTCACTTCACTTCTATAGCTCCCATCACTCTTGCCCTTCACGTTTGTCATTTGCTTCTCCTTATATTTATTTTTAGTCTTCACTTCTAATTAAACTAAAAGAATTATCTTCATGGCTCAACTTTCTGAAATGCATAACTAGTCATGGGTTGAGGGCATATTTAACTGTGTTATAAATGTACTGTTACTCTTGCACTTTATATGATACACTAAGTTGCTAAACCTCTAAACTGATGGAAATGTTATTCAAGCGTCTGCATAGAAAAAGCCTTATTCTTTTGTAGCATTCTTGTTAAATGACATATCTGCTTCTAATCCAATTTTTTTTTTATATAAATGAAGCTCAAAAAAGAGTTTAGCAGTGATATTGCAGCTGCAGAGGCTGCAGTCAGGGGACTTGGTGCTACTACCCCTTGCAGTCATGCCGATCTTACCAGTCTTTTCCGAGTAGCTGCTCACGAAGCAAGAAAGTCAACCGCCCAGAATCGTATTCTAAGAGTGGTATTTTCATTATACCTTTAGTCCTAATCTGTCAACTCAGCTCAAATATTTATCTATTATCTGAAACTATGAGTGAGCCTAGATTATCAGACCTTGAACGTCTTATGTTTCAATGTATGTTTGAAAGATCATATGGATGCATCATAACCATTTGTTGCATTTAGATTCTTATTTATTGCAGATCATCGACACGACCCCAACATCAATGGCCTGTGAACCAAAAAGTCTTCACTTTTGATGTTATATACCTCCACGAGAAGCCCGGACCTGACAACTGCCCACAGGAGGTGTATGATGCCTTAGTTGATGCCCTTGATCATGTCAGCCAGTATGAAGGCTATATTTTCGAGAGTGGCCAGGGAATTGCACGTATTCTGTACCGTTGTATGTGTCTGTTGTTATCACACCCCCAGCAGCGAATATCACTAGATGATCTAGATATACCAAAGCCTCTTACAAAGAAATTGCCTCCCGCTGATTCTGTTCCTGCGGCCGAAGTTGTCCCTGTTACCAGCCAGTGAAACAACTAGGGGCTGAAAACAATGGTGGAAACCTGGATTGTTGTTGTAGCTTAATGTTACCTCACTTGTTCATCTGTATTCTGATGTTTTTTTGGCTATTTCTCTTTCTGTTGACAGATTAAGTTTTGTTTAATGTACATAAGGTCAAGTTTATGCGATAATAGAGACAACGGTCTAATGGTATGATATTCATCTTTGTCATGTTCAGATTATTTGCGCGAAATGTCATATTTTGATAATCATATTACTTATTGTTGGGTCCATTTGGGTATCAGAAAGTTGACTTTCATTCTTGAGATCGGGGAAGGGATGAATATTTTTTGTATGAGAGAGGAGAG

mRNA sequence

GTTTCTTTCTCACTAAGTGGAATTACGCTGAGAGATATAAATATAACTCGATCGTCCACGACGCTGTGCAATCGTATCTACCGTAAACTGATAAACGGCTCCTTCTACGTGCCCCCAAAAAAGAAACAGTAAATCCCCAATTCAATTTCTGAAATACCAAAAATCGACGCCGAAGAACCATGGAGGCAATCGAAGTTGAGAGAGGAGGAAGCGGATACTCACTGAAACCATCGCGATTAAACAGCGAAGACATTCTCTTCTGCATAGATGTGAACCCTGAATCTTCGGTTGAGATCAAAACCACCGGCTCTAATGGACGACCCATCACCAGAATGGACTCCATTAAGCAAGCAATTCTTCTCTTCGTCCACGCCAAACTCTCCATGAATCCTGACCACCGATTTGCTTTCACCACCGTCGCCAAATCTGCCATTTGGCTCAAAAAAGAGTTTAGCAGTGATATTGCAGCTGCAGAGGCTGCAGTCAGGGGACTTGGTGCTACTACCCCTTGCAGTCATGCCGATCTTACCAGTCTTTTCCGAGTAGCTGCTCACGAAGCAAGAAAGTCAACCGCCCAGAATCGTATTCTAAGAGTGATTCTTATTTATTGCAGATCATCGACACGACCCCAACATCAATGGCCTGTGAACCAAAAAGTCTTCACTTTTGATGTTATATACCTCCACGAGAAGCCCGGACCTGACAACTGCCCACAGGAGGTGTATGATGCCTTAGTTGATGCCCTTGATCATGTCAGCCAGTATGAAGGCTATATTTTCGAGAGTGGCCAGGGAATTGCACGTATTCTGTACCGTTGTATGTGTCTGTTGTTATCACACCCCCAGCAGCGAATATCACTAGATGATCTAGATATACCAAAGCCTCTTACAAAGAAATTGCCTCCCGCTGATTCTGTTCCTGCGGCCGAAGTTGTCCCTGTTACCAGCCAGTGAAACAACTAGGGGCTGAAAACAATGGTGGAAACCTGGATTGTTGTTGTAGCTTAATGTTACCTCACTTGTTCATCTGTATTCTGATGTTTTTTTGGCTATTTCTCTTTCTGTTGACAGATTAAGTTTTGTTTAATGTACATAAGGTCAAGTTTATGCGATAATAGAGACAACGGTCTAATGGTATGATATTCATCTTTGTCATGTTCAGATTATTTGCGCGAAATGTCATATTTTGATAATCATATTACTTATTGTTGGGTCCATTTGGGTATCAGAAAGTTGACTTTCATTCTTGAGATCGGGGAAGGGATGAATATTTTTTGTATGAGAGAGGAGAG

Coding sequence (CDS)

ATGGAGGCAATCGAAGTTGAGAGAGGAGGAAGCGGATACTCACTGAAACCATCGCGATTAAACAGCGAAGACATTCTCTTCTGCATAGATGTGAACCCTGAATCTTCGGTTGAGATCAAAACCACCGGCTCTAATGGACGACCCATCACCAGAATGGACTCCATTAAGCAAGCAATTCTTCTCTTCGTCCACGCCAAACTCTCCATGAATCCTGACCACCGATTTGCTTTCACCACCGTCGCCAAATCTGCCATTTGGCTCAAAAAAGAGTTTAGCAGTGATATTGCAGCTGCAGAGGCTGCAGTCAGGGGACTTGGTGCTACTACCCCTTGCAGTCATGCCGATCTTACCAGTCTTTTCCGAGTAGCTGCTCACGAAGCAAGAAAGTCAACCGCCCAGAATCGTATTCTAAGAGTGATTCTTATTTATTGCAGATCATCGACACGACCCCAACATCAATGGCCTGTGAACCAAAAAGTCTTCACTTTTGATGTTATATACCTCCACGAGAAGCCCGGACCTGACAACTGCCCACAGGAGGTGTATGATGCCTTAGTTGATGCCCTTGATCATGTCAGCCAGTATGAAGGCTATATTTTCGAGAGTGGCCAGGGAATTGCACGTATTCTGTACCGTTGTATGTGTCTGTTGTTATCACACCCCCAGCAGCGAATATCACTAGATGATCTAGATATACCAAAGCCTCTTACAAAGAAATTGCCTCCCGCTGATTCTGTTCCTGCGGCCGAAGTTGTCCCTGTTACCAGCCAGTGA

Protein sequence

MEAIEVERGGSGYSLKPSRLNSEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAILLFVHAKLSMNPDHRFAFTTVAKSAIWLKKEFSSDIAAAEAAVRGLGATTPCSHADLTSLFRVAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPVNQKVFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGIARILYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSVPAAEVVPVTSQ

Homology

[Close]

BLAST of Bhi09G002596 vs. TAIR 10
Match: AT4G32960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits to 106 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 337.4 bits (864), Expect = 9.9e-93
Identity = 158/242 (65.29%), Postives = 197/242 (81.40%), Query Frame = 0


Query: 9   GGSGYSLKPSRLNSEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAILLFVHAKLS 68
           G + Y+LKP R+ SEDIL CIDV+ ES VE+KTTG+NGRP+ RM+ +KQAI+LF+H KLS
Sbjct: 12  GTTRYALKPGRIKSEDILICIDVDAESMVEMKTTGTNGRPLIRMECVKQAIILFIHNKLS 71

Query: 69  MNPDHRFAFTTVAKSAIWLKKEFSSDIAAAEAAVRGLGATTPCSHADLTSLFRVAAHEAR 128
           +NPDHRFAF T+AKSA WLKKEF+SD  +A A++RGL      S ADLT LFR AA EA+
Sbjct: 72  INPDHRFAFATLAKSAAWLKKEFTSDAESAVASLRGLSGNKSSSRADLTLLFRAAAQEAK 131

Query: 129 KSTAQNRILRVILIYCRSSTRPQHQWPVNQKVFTFDVIYLHEKPGPDNCPQEVYDALVDA 188
            S AQNRI RVILIYCRSS RP H+WP+NQK+FT DV+YLH+KP PDNCPQ+VYD+LVDA
Sbjct: 132 VSRAQNRIFRVILIYCRSSMRPTHEWPLNQKLFTLDVMYLHDKPSPDNCPQDVYDSLVDA 191

Query: 189 LDHVSQYEGYIFESGQGIARILYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSVPA 248
           ++HVS+YEGYIFESGQG+AR +++ M +LL+HPQQR + DDLDIP  L KK+P  ++  A
Sbjct: 192 VEHVSEYEGYIFESGQGLARSVFKPMSMLLTHPQQRCAQDDLDIPMSLAKKVPVTEAASA 251

Query: 249 AE 251
            +
Sbjct: 252 VD 253

[Close]

BLAST of Bhi09G002596 vs. TAIR 10
Match: AT4G32970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32960.1); Has 552 Blast hits to 489 proteins in 85 species: Archae - 4; Bacteria - 14; Metazoa - 187; Fungi - 12; Plants - 225; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). )

HSP 1 Score: 275.0 bits (702), Expect = 6.1e-74
Identity = 130/218 (59.63%), Postives = 169/218 (77.52%), Query Frame = 0


Query: 22  SEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAILLFVHAKLSMNPDHRFAFTTVA 81
           SEDIL C+DV+ ES+VE+KTTG+NG+P+ R++ +K AI  F+H KLS N DHRFAF T++
Sbjct: 21  SEDILICVDVDAESTVEMKTTGTNGKPLNRLECLKLAITRFIHDKLSRNSDHRFAFATLS 80

Query: 82  KSAIWLKKEFSSDIAAAEAAVRGLGATTPCSHADLTSLFRVAAHEARKSTAQNRILRVIL 141
           +SA WLKKEFS+D  +A A++R + AT     ADLT LF+ AA EA+ S AQNRILRVIL
Sbjct: 81  QSAAWLKKEFSNDAKSAAASLREMSATRSSGPADLTFLFQEAAQEAKTSRAQNRILRVIL 140

Query: 142 IYCRSSTRPQHQWPVNQKVFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFE 201
           +YCRSS RP H WP+NQK+FT DV+YLH+K GPDNC  +VYD+LVDA++ VS+YEGYIFE
Sbjct: 141 MYCRSSVRPTHDWPINQKLFTLDVMYLHDKSGPDNCTHDVYDSLVDAIERVSEYEGYIFE 200

Query: 202 SGQGIARILYRCMCLLLSHPQQRISLDDLDIPKPLTKK 240
              G+++ ++R M  LLSHP QR +   +D+PKP  KK
Sbjct: 201 GSHGLSQSVFRRMSTLLSHPPQRCA--QVDLPKPPAKK 236

[Close]

BLAST of Bhi09G002596 vs. ExPASy TrEMBL
Match: A0A1S3BUH3 (BRISC and BRCA1-A complex member 1 OS=Cucumis melo OX=3656 GN=LOC103493644 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.3e-137
Identity = 242/257 (94.16%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   MEAIEVERGGSGYSLKPSRLNSEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60
           MEAIEVERGGSGYSLKPSRLN+EDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEAIEVERGGSGYSLKPSRLNNEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 61  LFVHAKLSMNPDHRFAFTTVAKSAIWLKKEFSSDIAAAEAAVRGLGATTPCSHADLTSLF 120
           LFVHAKLSMNPDHRFAFTT+AKSAIWLKKEFSSDIA+AEAAVRGLGAT+PC+HADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLF 120

Query: 121 RVAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPVNQKVFTFDVIYLHEKPGPDNCPQE 180
           R+AAHE+RKSTAQNRILR+ILIYCRSSTRPQHQWP NQK+FTFDVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHESRKSTAQNRILRLILIYCRSSTRPQHQWPANQKLFTFDVIYLHEKPGPDNCPQE 180

Query: 181 VYDALVDALDHVSQYEGYIFESGQGIARILYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240
           VYDALVDALDHVSQYEGYIFESGQG+AR+LYRCMCLLLSHPQQRISLDDLDIPKPLTKKL
Sbjct: 181 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240

Query: 241 PPADSVPAAEVVPVTSQ 258
           PPADS P  EVVPVTSQ
Sbjct: 241 PPADSTPPNEVVPVTSQ 257

[Close]

BLAST of Bhi09G002596 vs. ExPASy TrEMBL
Match: A0A0A0L024 (BRISC and BRCA1-A complex member 1 OS=Cucumis sativus OX=3659 GN=Csa_4G645930 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.4e-136
Identity = 239/257 (93.00%), Postives = 252/257 (98.05%), Query Frame = 0


Query: 1   MEAIEVERGGSGYSLKPSRLNSEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60
           MEAIEVERGGSGYSLK SRLN+EDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEAIEVERGGSGYSLKSSRLNNEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 61  LFVHAKLSMNPDHRFAFTTVAKSAIWLKKEFSSDIAAAEAAVRGLGATTPCSHADLTSLF 120
           LFVHAKLSMNPDHRFAFTT+AKSAIWLKKEFSSDIA+AEAAVRGLGAT+PC+HADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLF 120

Query: 121 RVAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPVNQKVFTFDVIYLHEKPGPDNCPQE 180
           R+AAHE+RKSTAQNRILR+ILIYCRSST+PQHQWP NQK+FTFDVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHESRKSTAQNRILRLILIYCRSSTQPQHQWPANQKLFTFDVIYLHEKPGPDNCPQE 180

Query: 181 VYDALVDALDHVSQYEGYIFESGQGIARILYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240
           VYDALVDALDHVSQYEGYIFESGQG+AR+LYRCMCLLLSHPQQRISLDDLDIPKPLTKKL
Sbjct: 181 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240

Query: 241 PPADSVPAAEVVPVTSQ 258
           PPAD+ P  EVVPVTSQ
Sbjct: 241 PPADTAPPNEVVPVTSQ 257

[Close]

BLAST of Bhi09G002596 vs. ExPASy TrEMBL
Match: A0A6J1FN80 (BRISC and BRCA1-A complex member 1 OS=Cucurbita moschata OX=3662 GN=LOC111446703 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.5e-128
Identity = 229/257 (89.11%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 1   MEAIEVERGGSGYSLKPSRLNSEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60
           ME +E ERGGS YSLKPSR+N+EDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEGMEGERGGSRYSLKPSRINNEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 61  LFVHAKLSMNPDHRFAFTTVAKSAIWLKKEFSSDIAAAEAAVRGLGATTPCSHADLTSLF 120
           LFVHAKLSMNPDHRFAFTT+AKSA WLKK+FSSDIA+ EAA+RGL  T+ CSHADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTIAKSATWLKKDFSSDIASVEAAIRGLVPTSSCSHADLTSLF 120

Query: 121 RVAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPVNQKVFTFDVIYLHEKPGPDNCPQE 180
           R+AAHEARKSTAQN ILRVILIYCRSSTRPQHQWPVNQK+FT DVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHEARKSTAQNHILRVILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 180

Query: 181 VYDALVDALDHVSQYEGYIFESGQGIARILYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240
           VYDALVDALD VSQYEGYIFESGQG+AR+LYRCMCLLLSHPQQRISLDDL+IPK LTKK+
Sbjct: 181 VYDALVDALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLNIPKLLTKKV 240

Query: 241 PPADSVPAAEVVPVTSQ 258
           PPADS+PA EVVPVTSQ
Sbjct: 241 PPADSIPANEVVPVTSQ 257

[Close]

BLAST of Bhi09G002596 vs. ExPASy TrEMBL
Match: A0A6J1CMH8 (BRISC and BRCA1-A complex member 1 OS=Momordica charantia OX=3673 GN=LOC111012487 PE=3 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.5e-128
Identity = 227/257 (88.33%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MEAIEVERGGSGYSLKPSRLNSEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60
           MEAIE +RG S YSLKPSR+++EDILFCIDV+ ESS+EIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 60

Query: 61  LFVHAKLSMNPDHRFAFTTVAKSAIWLKKEFSSDIAAAEAAVRGLGATTPCSHADLTSLF 120
           LFVHAKLS+NP+HRFAFTT+AKSAIWLKKEFSSDI + EAAVRGL AT+ CSHADLTSLF
Sbjct: 61  LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 120

Query: 121 RVAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPVNQKVFTFDVIYLHEKPGPDNCPQE 180
           R+AAHEA+KSTAQNRILR+ILIYCRSSTRPQHQWPVNQK+FT DVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 180

Query: 181 VYDALVDALDHVSQYEGYIFESGQGIARILYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240
           VYDALVDALDHVSQYEGYIFESGQG+AR+LYRCMCLLLSHP+QRISLDDLDIPKPLTKKL
Sbjct: 181 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 240

Query: 241 PPADSVPAAEVVPVTSQ 258
           PP DSVP  EVVPVTSQ
Sbjct: 241 PPTDSVPTNEVVPVTSQ 257

[Close]

BLAST of Bhi09G002596 vs. ExPASy TrEMBL
Match: A0A6J1J2J5 (BRISC and BRCA1-A complex member 1 OS=Cucurbita maxima OX=3661 GN=LOC111481237 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.3e-128
Identity = 228/257 (88.72%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 1   MEAIEVERGGSGYSLKPSRLNSEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60
           ME IE ERGGS YSL+PSR+N+EDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEGIEGERGGSRYSLQPSRINNEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 61  LFVHAKLSMNPDHRFAFTTVAKSAIWLKKEFSSDIAAAEAAVRGLGATTPCSHADLTSLF 120
           LFVHAKLSMNPDHRFAFTT+AKSA WLK++FSSDIA+ EAA+RGL  T+ CSHADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTIAKSATWLKRDFSSDIASVEAAIRGLVPTSSCSHADLTSLF 120

Query: 121 RVAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPVNQKVFTFDVIYLHEKPGPDNCPQE 180
           R+AAHEARKSTAQN ILRVILIYCRSSTRPQHQWPVNQK+FT DVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHEARKSTAQNHILRVILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 180

Query: 181 VYDALVDALDHVSQYEGYIFESGQGIARILYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240
           VYDALVDALD VSQYEGYIFESGQG+AR+LYRCMCLLLSHPQQRISLDDL+IPK LTKK+
Sbjct: 181 VYDALVDALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLNIPKLLTKKV 240

Query: 241 PPADSVPAAEVVPVTSQ 258
           PPADS+PA EVVPVTSQ
Sbjct: 241 PPADSIPANEVVPVTSQ 257

The following BLAST results are available for this feature:

BLAST of Bhi09G002596 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32960.1	9.9e-93	65.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G32970.1	6.1e-74	59.63	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

BLAST of Bhi09G002596 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi09G002596 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUH3	1.3e-137	94.16	BRISC and BRCA1-A complex member 1 OS=Cucumis melo OX=3656 GN=LOC103493644 PE=3 ...	[more]
A0A0A0L024	7.4e-136	93.00	BRISC and BRCA1-A complex member 1 OS=Cucumis sativus OX=3659 GN=Csa_4G645930 PE...	[more]
A0A6J1FN80	1.5e-128	89.11	BRISC and BRCA1-A complex member 1 OS=Cucurbita moschata OX=3662 GN=LOC111446703...	[more]
A0A6J1CMH8	2.5e-128	88.33	BRISC and BRCA1-A complex member 1 OS=Momordica charantia OX=3673 GN=LOC11101248...	[more]
A0A6J1J2J5	4.3e-128	88.72	BRISC and BRCA1-A complex member 1 OS=Cucurbita maxima OX=3661 GN=LOC111481237 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036465	von Willebrand factor A-like domain superfamily	GENE3D	3.40.50.410	von Willebrand factor, type A domain	coord: 23..160 e-value: 6.3E-6 score: 27.9
IPR036465	von Willebrand factor A-like domain superfamily	SUPERFAMILY	53300	vWA-like	coord: 25..142
IPR026126	BRISC and BRCA1-A complex member 1	PANTHER	PTHR15660	UNCHARACTERIZED	coord: 11..255
None	No IPR available	CDD	cd00198	vWFA	coord: 24..142 e-value: 1.27684E-5 score: 42.1678

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M002596	Bhi09M002596	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045739	positive regulation of DNA repair
cellular_component	GO:0070531	BRCA1-A complex
cellular_component	GO:0070552	BRISC complex