Bhi09G002532 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G002532
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Transmembrane protein
Location	chr9: 79573838 .. 79574197 (+)
RNA-Seq Expression	Bhi09G002532
Synteny	Bhi09G002532

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTGGGATCGGCGCTACGTCGAGGAGGAGCAGGTTTTCTTCCTACGACCGGTGGGTGGCAGTAGGCCTCGGCCTTCTCGCGGTTGTTTCGCCGCTCTATATCGACCGGAGGCCGAGCATCGAGGAGTTGGAAGAGGAGGAATCATCCATTAATCTTGGCTTCTGGTTGCCTGCTCTTCTCATGACCTTGATCTTCATTATTGCTGGAGTGCTTCACTTAGAACAGAGATGTGCTAGATTTGATGCTTATTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCATCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAAAGCTTCTTTGATGTTTTGGGAGTCTTAG

mRNA sequence

ATGGAGGTTGGGATCGGCGCTACGTCGAGGAGGAGCAGGTTTTCTTCCTACGACCGGTGGGTGGCAGTAGGCCTCGGCCTTCTCGCGGTTGTTTCGCCGCTCTATATCGACCGGAGGCCGAGCATCGAGGAGTTGGAAGAGGAGGAATCATCCATTAATCTTGGCTTCTGGTTGCCTGCTCTTCTCATGACCTTGATCTTCATTATTGCTGGAGTGCTTCACTTAGAACAGAGATGTGCTAGATTTGATGCTTATTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCATCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAAAGCTTCTTTGATGTTTTGGGAGTCTTAG

Coding sequence (CDS)

ATGGAGGTTGGGATCGGCGCTACGTCGAGGAGGAGCAGGTTTTCTTCCTACGACCGGTGGGTGGCAGTAGGCCTCGGCCTTCTCGCGGTTGTTTCGCCGCTCTATATCGACCGGAGGCCGAGCATCGAGGAGTTGGAAGAGGAGGAATCATCCATTAATCTTGGCTTCTGGTTGCCTGCTCTTCTCATGACCTTGATCTTCATTATTGCTGGAGTGCTTCACTTAGAACAGAGATGTGCTAGATTTGATGCTTATTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCATCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAAAGCTTCTTTGATGTTTTGGGAGTCTTAG

Protein sequence

MEVGIGATSRRSRFSSYDRWVAVGLGLLAVVSPLYIDRRPSIEELEEEESSINLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWES

Homology

[Close]

BLAST of Bhi09G002532 vs. TAIR 10
Match: AT5G21910.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 2.6e-19
Identity = 54/113 (47.79%), Postives = 72/113 (63.72%), Query Frame = 0


Query: 1   MEVGIGATSRRSRFSSYDRWVAVGLGLLAVVSPLYIDRRPSIEELEEEESSINLGFWLPA 60
           ME G  ++    RF++  + +A+ L +LAV+SPLYIDR  S E+LEEEE   +  F    
Sbjct: 1   METG-SSSPMMGRFTTSRKLLAISLSVLAVLSPLYIDRL-SEEDLEEEEELFSFMFSFSL 60

Query: 61  LLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIILLLLAFVLKCKAS 114
           LL+ LI  IA  L+ +    RFD YWIHR+ GS  G+ +IL+LL FVL CKAS
Sbjct: 61  LLLLLILAIALSLYSDPSLTRFDPYWIHRLCGSFGGLLVILILLVFVLICKAS 111

[Close]

BLAST of Bhi09G002532 vs. ExPASy TrEMBL
Match: A0A0A0L2W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G648010 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.4e-57
Identity = 113/119 (94.96%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MEVGIGATSRRSRFSSYDRWVAVGLGLLAVVSPLYIDRRPSIEELEEEESSINLGFWLPA 60
           MEVG+GA SRRSRFSSYDRW+AVGLGLLAVVSPLYIDRRPSIEELEEEESSI+LGFWLPA
Sbjct: 1   MEVGVGAMSRRSRFSSYDRWLAVGLGLLAVVSPLYIDRRPSIEELEEEESSIHLGFWLPA 60

Query: 61  LLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWES 120
           LLM LIFIIAGVLHLEQRCARFD YWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWES
Sbjct: 61  LLMILIFIIAGVLHLEQRCARFDPYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWES 119

[Close]

BLAST of Bhi09G002532 vs. ExPASy TrEMBL
Match: A0A5D3D907 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001720 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MEVGIGATSRRSRFSSYDRWVAVGLGLLAVVSPLYIDRRPSIEELEEEESSINLGFWLPA 60
           MEVG+GA SRRSRFSSYDRW+AVGLGLLAVVSPLYIDRRPSIEELEEEESSI+LGFWLPA
Sbjct: 1   MEVGVGAMSRRSRFSSYDRWLAVGLGLLAVVSPLYIDRRPSIEELEEEESSIHLGFWLPA 60

Query: 61  LLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWES 120
           LL+ LIFIIAGVLHLEQRCARFD YWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWES
Sbjct: 61  LLIILIFIIAGVLHLEQRCARFDPYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWES 119

[Close]

BLAST of Bhi09G002532 vs. ExPASy TrEMBL
Match: A0A1S3BUL9 (uncharacterized protein LOC103493702 OS=Cucumis melo OX=3656 GN=LOC103493702 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MEVGIGATSRRSRFSSYDRWVAVGLGLLAVVSPLYIDRRPSIEELEEEESSINLGFWLPA 60
           MEVG+GA SRRSRFSSYDRW+AVGLGLLAVVSPLYIDRRPSIEELEEEESSI+LGFWLPA
Sbjct: 1   MEVGVGAMSRRSRFSSYDRWLAVGLGLLAVVSPLYIDRRPSIEELEEEESSIHLGFWLPA 60

Query: 61  LLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWES 120
           LL+ LIFIIAGVLHLEQRCARFD YWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWES
Sbjct: 61  LLIILIFIIAGVLHLEQRCARFDPYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWES 119

[Close]

BLAST of Bhi09G002532 vs. ExPASy TrEMBL
Match: A0A6J1ILG7 (uncharacterized protein LOC111477299 OS=Cucurbita maxima OX=3661 GN=LOC111477299 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 110/118 (93.22%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MEVGIGATSRRSRFSSYDRWVAVGLGLLAVVSPLYIDRRPSIEELEEEESSINLGFWLPA 60
           MEVGIGATSRRSRFSSYDRWVAVGLG+LAVVSPLYIDRRPS +  EEEESS+NLGFWLPA
Sbjct: 1   MEVGIGATSRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPA 60

Query: 61  LLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWE 119
           LLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+LLLLAFVLKCKASLMFW+
Sbjct: 61  LLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

[Close]

BLAST of Bhi09G002532 vs. ExPASy TrEMBL
Match: A0A6J1F9J0 (uncharacterized protein LOC111443331 OS=Cucurbita moschata OX=3662 GN=LOC111443331 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.0e-55
Identity = 109/118 (92.37%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MEVGIGATSRRSRFSSYDRWVAVGLGLLAVVSPLYIDRRPSIEELEEEESSINLGFWLPA 60
           MEVGIGATSRRSRFSSYDRWVAVGLG+LAVVSPLYIDRRPS +  EEEESS+NLGFWLPA
Sbjct: 1   MEVGIGATSRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPA 60

Query: 61  LLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWE 119
           LL+TLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+LLLLAFVLKCKASLMFW+
Sbjct: 61  LLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

The following BLAST results are available for this feature:

BLAST of Bhi09G002532 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21910.1	2.6e-19	47.79	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

BLAST of Bhi09G002532 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi09G002532 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2W6	5.4e-57	94.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G648010 PE=4 SV=1	[more]
A0A5D3D907	1.6e-56	94.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BUL9	1.6e-56	94.12	uncharacterized protein LOC103493702 OS=Cucumis melo OX=3656 GN=LOC103493702 PE=...	[more]
A0A6J1ILG7	3.5e-56	93.22	uncharacterized protein LOC111477299 OS=Cucurbita maxima OX=3661 GN=LOC111477299...	[more]
A0A6J1F9J0	1.0e-55	92.37	uncharacterized protein LOC111443331 OS=Cucurbita moschata OX=3662 GN=LOC1114433...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35758:SF2	TRANSMEMBRANE PROTEIN	coord: 10..114
None	No IPR available	PANTHER	PTHR35758	TRANSMEMBRANE PROTEIN	coord: 10..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M002532	Bhi09M002532	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane