Bhi09G002456 (gene) Wax gourd (B227) v1

Overview
NameBhi09G002456
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionDUF4216 domain-containing protein
Locationchr9: 77360564 .. 77360754 (+)
RNA-Seq ExpressionBhi09G002456
SyntenyBhi09G002456
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCACAAACATTTAATAAAGAAGATGTTGAGCCTTTGACTATTGAAGACCAAGTAGATTTACTTGTACAAGGTAATGAAGTAGCATCGACTAATGAAGAAGATTTTGATTTCGATCATTCTAGTGATGAGTTAATGAGCACACATTCAAATGCATCACTATATGATGAAGATTGTGACAGTGACGCATAA

mRNA sequence

ATTCACAAACATTTAATAAAGAAGATGTTGAGCCTTTGACTATTGAAGACCAAGTAGATTTACTTGTACAAGGTAATGAAGTAGCATCGACTAATGAAGAAGATTTTGATTTCGATCATTCTAGTGATGAGTTAATGAGCACACATTCAAATGCATCACTATATGATGAAGATTGTGACAGTGACGCATAA

Coding sequence (CDS)

ATTCACAAACATTTAATAAAGAAGATGTTGAGCCTTTGACTATTGAAGACCAAGTAGATTTACTTGTACAAGGTAATGAAGTAGCATCGACTAATGAAGAAGATTTTGATTTCGATCATTCTAGTGATGAGTTAATGAGCACACATTCAAATGCATCACTATATGATGAAGATTGTGACAGTGACGCATAA

Protein sequence

SQTFNKEDVEPLTIEDQVDLLVQGNEVASTNEEDFDFDHSSDELMSTHSNASLYDEDCDSDA
Homology
BLAST of Bhi09G002456 vs. ExPASy TrEMBL
Match: A0A5D3D2R6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001250 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-05
Identity = 37/65 (56.92%), Postives = 42/65 (64.62%), Query Frame = 0

Query: 1   SQTFNKEDVEPLTIEDQVDLLVQGNEVAST-----NEEDFDFDHSSDELMSTHSNASLYD 60
           SQTFN+EDVEP  I DQ D+  Q NE AST     +EEDFD ++SSDE MS        D
Sbjct: 307 SQTFNREDVEPSIIGDQEDITAQSNEEASTDEALVDEEDFDLNNSSDESMS--------D 363

BLAST of Bhi09G002456 vs. ExPASy TrEMBL
Match: A0A5D3DYY6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00110 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.5e-05
Identity = 36/65 (55.38%), Postives = 42/65 (64.62%), Query Frame = 0

Query: 1   SQTFNKEDVEPLTIEDQVDLLVQGNEVAST-----NEEDFDFDHSSDELMSTHSNASLYD 60
           SQTFN +DVEP  I DQ D++ Q NE AST     +EEDFD ++SSDE MS        D
Sbjct: 590 SQTFNSKDVEPSIIGDQEDIIAQSNEEASTDEALVDEEDFDSNNSSDESMS--------D 646

BLAST of Bhi09G002456 vs. ExPASy TrEMBL
Match: A0A5A7VA83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00590 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.5e-05
Identity = 36/65 (55.38%), Postives = 42/65 (64.62%), Query Frame = 0

Query: 1   SQTFNKEDVEPLTIEDQVDLLVQGNEVAST-----NEEDFDFDHSSDELMSTHSNASLYD 60
           SQTFN +DVEP  I DQ D++ Q NE AST     +EEDFD ++SSDE MS        D
Sbjct: 628 SQTFNSKDVEPSIIGDQEDIIAQSNEEASTDEALVDEEDFDSNNSSDESMS--------D 684

BLAST of Bhi09G002456 vs. ExPASy TrEMBL
Match: A0A5A7UVN7 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00310 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-04
Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 0

Query: 1   SQTFNKEDVEPLTIEDQVDLLVQGNEVAST-----NEEDFDFDHSSDELMSTHSNASLYD 60
           S TFN+EDVEP  I DQ D++ Q NE AST     +EEDFD ++SSDE        S+ D
Sbjct: 499 SHTFNREDVEPSIIGDQEDIIAQSNEEASTDEALVDEEDFDSNNSSDE--------SMND 555

BLAST of Bhi09G002456 vs. ExPASy TrEMBL
Match: A0A5A7TYI3 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G001630 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-04
Identity = 36/65 (55.38%), Postives = 42/65 (64.62%), Query Frame = 0

Query: 1   SQTFNKEDVEPLTIEDQVDLLVQGNEVAST-----NEEDFDFDHSSDELMSTHSNASLYD 60
           SQTFN+EDVEP  I DQ D++ Q  E AST     +EEDFD ++SSDE MS        D
Sbjct: 430 SQTFNREDVEPSIIGDQEDIIAQLPEEASTDEALVDEEDFDSNNSSDESMS--------D 486

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D2R61.5e-0556.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DYY65.5e-0555.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VA835.5e-0555.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UVN72.1e-0452.31DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TYI32.8e-0455.38DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M002456Bhi09M002456mRNA