Bhi09G002410 (gene) Wax gourd (B227) v1

Overview
NameBhi09G002410
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC113712759
Locationchr9: 76288056 .. 76288313 (+)
RNA-Seq ExpressionBhi09G002410
SyntenyBhi09G002410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTTGCCGTTATGTATAGTGACGAAAAGACAATACGAATTTCCCCCGAGGAGATTTGAAGTACCGGTGATGGCGATGTCGAGTGGAGGGCTACTGAGCGGGACGAAGTGTAGGCCAGCGTGTGAGAGTGAGTGTGTAGGGAAGGTTATGGATTTAAAAATGAAACAATATGATTATGTAATGCAAGTGGAGATTGGGAAATGGGATGGGAGAAAACATATGAGGATACGGTTAGATGAAGATGAGGGAATGTAG

mRNA sequence

ATGTGTTTGCCGTTATGTATAGTGACGAAAAGACAATACGAATTTCCCCCGAGGAGATTTGAAGTACCGGTGATGGCGATGTCGAGTGGAGGGCTACTGAGCGGGACGAAGTGTAGGCCAGCGTGTGAGAGTGAGTGTGTAGGGAAGGTTATGGATTTAAAAATGAAACAATATGATTATGTAATGCAAGTGGAGATTGGGAAATGGGATGGGAGAAAACATATGAGGATACGGTTAGATGAAGATGAGGGAATGTAG

Coding sequence (CDS)

ATGTGTTTGCCGTTATGTATAGTGACGAAAAGACAATACGAATTTCCCCCGAGGAGATTTGAAGTACCGGTGATGGCGATGTCGAGTGGAGGGCTACTGAGCGGGACGAAGTGTAGGCCAGCGTGTGAGAGTGAGTGTGTAGGGAAGGTTATGGATTTAAAAATGAAACAATATGATTATGTAATGCAAGTGGAGATTGGGAAATGGGATGGGAGAAAACATATGAGGATACGGTTAGATGAAGATGAGGGAATGTAG

Protein sequence

MCLPLCIVTKRQYEFPPRRFEVPVMAMSSGGLLSGTKCRPACESECVGKVMDLKMKQYDYVMQVEIGKWDGRKHMRIRLDEDEGM
Homology
BLAST of Bhi09G002410 vs. TAIR 10
Match: AT1G76250.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 74 Blast hits to 74 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-11
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0

Query: 3   LPLCIVTKRQYEFPPRRFEVPVMAMSSGGLLSGTKCRP---ACESECVGKVMDLKMKQYD 61
           LP CI+T R Y+FPP R+ VPV A+SS G L+G KCRP   AC   CV +VM    K++ 
Sbjct: 296 LPFCIMTDRTYDFPPYRYGVPVAALSSRGPLNGAKCRPCTVACNGSCVAEVMGKLNKEWS 355

BLAST of Bhi09G002410 vs. ExPASy TrEMBL
Match: A0A5D3D8Q7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00740 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.9e-12
Identity = 40/54 (74.07%), Postives = 43/54 (79.63%), Query Frame = 0

Query: 1   MCLPLCIVTKRQYEFPPRRFEVPVMAMSSGGLLSGTKCRP---ACESECVGKVM 52
           M LP CIVT+RQYEFPP RF VPV AMSS G LSGTKCRP   ACE+ECV +VM
Sbjct: 303 MRLPFCIVTERQYEFPPGRFGVPVAAMSSRGPLSGTKCRPCRVACEAECVERVM 356

BLAST of Bhi09G002410 vs. ExPASy TrEMBL
Match: A0A1S3BV06 (uncharacterized protein LOC103493803 OS=Cucumis melo OX=3656 GN=LOC103493803 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.9e-12
Identity = 40/54 (74.07%), Postives = 43/54 (79.63%), Query Frame = 0

Query: 1   MCLPLCIVTKRQYEFPPRRFEVPVMAMSSGGLLSGTKCRP---ACESECVGKVM 52
           M LP CIVT+RQYEFPP RF VPV AMSS G LSGTKCRP   ACE+ECV +VM
Sbjct: 303 MRLPFCIVTERQYEFPPGRFGVPVAAMSSRGPLSGTKCRPCRVACEAECVERVM 356

BLAST of Bhi09G002410 vs. ExPASy TrEMBL
Match: A0A0A0L0L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G658500 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.4e-12
Identity = 40/54 (74.07%), Postives = 42/54 (77.78%), Query Frame = 0

Query: 1   MCLPLCIVTKRQYEFPPRRFEVPVMAMSSGGLLSGTKCRP---ACESECVGKVM 52
           M LP CIVT+RQYEFPP RF VPV AMSS G LSGTKCRP   ACE ECV +VM
Sbjct: 291 MRLPFCIVTERQYEFPPGRFGVPVAAMSSRGPLSGTKCRPCRVACEGECVERVM 344

BLAST of Bhi09G002410 vs. ExPASy TrEMBL
Match: A0A6J1BX88 (uncharacterized protein LOC111005544 OS=Momordica charantia OX=3673 GN=LOC111005544 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 9.3e-11
Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 0

Query: 4   PLCIVTKRQYEFPPRRFEVPVMAMSSGGLLSGTKCRP---ACESECVGKVM 52
           P CIVT+RQY++PPR F VPV AM S GL+SG KCRP   ACE ECVG+VM
Sbjct: 297 PFCIVTERQYDYPPRGFGVPVAAMWSAGLMSGAKCRPCRAACEGECVGEVM 347

BLAST of Bhi09G002410 vs. ExPASy TrEMBL
Match: U5GKB3 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G011400 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 36/52 (69.23%), Postives = 39/52 (75.00%), Query Frame = 0

Query: 3   LPLCIVTKRQYEFPPRRFEVPVMAMSSGGLLSGTKCR---PACESECVGKVM 52
           LP CIVT R+YEFPP+RF VPV A+SS G LSG KCR   P CE  CVGKVM
Sbjct: 308 LPFCIVTDRRYEFPPKRFGVPVAALSSPGPLSGAKCRPCNPVCEGTCVGKVM 359

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G76250.11.4e-1150.82unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembra... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D8Q74.9e-1274.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BV064.9e-1274.07uncharacterized protein LOC103493803 OS=Cucumis melo OX=3656 GN=LOC103493803 PE=... [more]
A0A0A0L0L96.4e-1274.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G658500 PE=4 SV=1[more]
A0A6J1BX889.3e-1168.63uncharacterized protein LOC111005544 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
U5GKB31.2e-1069.23Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G011400 PE=4 ... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35112OS08G0360500 PROTEINcoord: 3..59

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M002410Bhi09M002410mRNA