Bhi09G002338 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G002338
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	agamous-like MADS-box protein AGL62
Location	chr9: 74542749 .. 74543260 (-)
RNA-Seq Expression	Bhi09G002338
Synteny	Bhi09G002338

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAACCCTCGGCCGTCAAAAGATCGAAATAAAAAAGTTAGAGAAGAAGAGCAGTAAACAAGTAACGTTTTCGAAACGTCGTGTTGGACTTTTCAAGAAAGCTAGCGAGCTCGCTATTCTTTGCGGAGTAGAGGTAGCCATTATTGTCTTCTCTCCCAATGATAAGATTTTTTGTTTCGGTCATCCGGATGTCGATGTGCTTTTGGATCGCTATCTCACCGGAAATTTGTCTCCGCCAAAGCAAGCAGAGAGTTATATTCCTGTAGCGGAGTTTAATCGTGATTTCACTGATATTGCATTGGAGTTTGAGGCAGAGAAGAAACGAGCGGCGGAATTGATTCGTGCGGCAGAAAATTCAAGGAAGAACGGCGGATTTTGGTGGCGGGAGGCGGTGGAAGGAATGAGATTGAAAGAATTGAAGGAGTTTCGATCGGCATTGATGAATTTGAGAGCCAAAGTGGCAGAGAGAGTTGAGCAATTGACGTCGATAAGAATCGGAGGGCCTCT

mRNA sequence

ATGAAGAAAACCCTCGGCCGTCAAAAGATCGAAATAAAAAAGTTAGAGAAGAAGAGCAGTAAACAAGTAACGTTTTCGAAACGTCGTGTTGGACTTTTCAAGAAAGCTAGCGAGCTCGCTATTCTTTGCGGAGTAGAGGTAGCCATTATTGTCTTCTCTCCCAATGATAAGATTTTTTGTTTCGGTCATCCGGATGTCGATGTGCTTTTGGATCGCTATCTCACCGGAAATTTGTCTCCGCCAAAGCAAGCAGAGAGTTATATTCCTGTAGCGGAGTTTAATCGTGATTTCACTGATATTGCATTGGAGTTTGAGGCAGAGAAGAAACGAGCGGCGGAATTGATTCGTGCGGCAGAAAATTCAAGGAAGAACGGCGGATTTTGGTGGCGGGAGGCGGTGGAAGGAATGAGATTGAAAGAATTGAAGGAGTTTCGATCGGCATTGATGAATTTGAGAGCCAAAGTGGCAGAGAGAGTTGAGCAATTGACGTCGATAAGAATCGGAGGGCCTCT

Coding sequence (CDS)

ATGAAGAAAACCCTCGGCCGTCAAAAGATCGAAATAAAAAAGTTAGAGAAGAAGAGCAGTAAACAAGTAACGTTTTCGAAACGTCGTGTTGGACTTTTCAAGAAAGCTAGCGAGCTCGCTATTCTTTGCGGAGTAGAGGTAGCCATTATTGTCTTCTCTCCCAATGATAAGATTTTTTGTTTCGGTCATCCGGATGTCGATGTGCTTTTGGATCGCTATCTCACCGGAAATTTGTCTCCGCCAAAGCAAGCAGAGAGTTATATTCCTGTAGCGGAGTTTAATCGTGATTTCACTGATATTGCATTGGAGTTTGAGGCAGAGAAGAAACGAGCGGCGGAATTGATTCGTGCGGCAGAAAATTCAAGGAAGAACGGCGGATTTTGGTGGCGGGAGGCGGTGGAAGGAATGAGATTGAAAGAATTGAAGGAGTTTCGATCGGCATTGATGAATTTGAGAGCCAAAGTGGCAGAGAGAGTTGAGCAATTGACGTCGATAAGAATCGGAGGGCCTCT

Protein sequence

MKKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFCFGHPDVDVLLDRYLTGNLSPPKQAESYIPVAEFNRDFTDIALEFEAEKKRAAELIRAAENSRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKVAERVEQLTSIRIGGP

Homology

[Close]

BLAST of Bhi09G002338 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-31
Identity = 74/163 (45.40%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFC 60
           +KK+ GRQKIE+ K++ +S+ QVTFSKRR GLFKKASEL  LCG EVAI+VFSP  K+F 
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPDVDVLLDRYLTGNLSPPKQAESY--------IPVAEFNRDFTDIALEFEAEKKRAA 120
           FGHP+VD ++DR++  N  PP Q  +           V + N   T +  + E EKK+  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 ELIRAAENSRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKV 156
           EL +  E ++  G  WW + VE + L +L+ F+  L NL+  V
Sbjct: 122 ELKKIREKTKALGN-WWEDPVEELALSQLEGFKGNLENLKKVV 163

[Close]

BLAST of Bhi09G002338 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 122.9 bits (307), Expect = 2.5e-28
Identity = 77/160 (48.12%), Postives = 103/160 (64.38%), Query Frame = 0


Query: 2   KKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFCF 61
           K+++GRQKI + K++K+S +QVTFSKRR GLFKKASEL  LCG E+ IIVFSP  K F F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPDVDVLLDRYLTGN---LSPPKQAE-SYIPVAEFNRDFTDIALEFEAEKKR--AAELI 121
           GHP V+ +LDRY++ N   L+  +Q + S     E N   T I  E E EKK+  A E +
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 RAAENSRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKV 156
           R  E+ R++   WW + VE M + +L+E + AL  LR  V
Sbjct: 179 R-KESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Bhi09G002338 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 110.9 bits (276), Expect = 1.0e-24
Identity = 68/168 (40.48%), Postives = 101/168 (60.12%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFC 60
           +KKTLGR+K+EI K+ K+S+ QVTFSKR+ GLFKKASE   LC  ++A+IVFSP  K+F 
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPDVDVLLDRY----LTGNLSPPKQAESYIPVAEFNRDFTDIALEFEAEKKRAAELIR 120
           FGHP+VDVLLD +    +  N +   ++ + + V   N+ +T++  E E E+K       
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQS--- 121

Query: 121 AAENSRKNGGF--WWREAVEGMRLKELKEFRSALMNLRAKVAERVEQL 163
            A+N R+N     WW ++   + L +       L +L+  V E+  QL
Sbjct: 122 RAQNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQL 166

[Close]

BLAST of Bhi09G002338 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 109.4 bits (272), Expect = 2.9e-24
Identity = 64/165 (38.79%), Postives = 97/165 (58.79%), Query Frame = 0


Query: 2   KKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFCF 61
           +K LGR+KIE+ K+  +S+ QVTFSKRR GLFKK SEL  LC  E+AIIVFSP+ K + F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPDVDVLLD----RYLTGNLSPPKQAESYIPVAEFNRDFTDIALEFEAEKKRAAELIRA 121
           GHP+V+ LLD    R +  N +   ++ + + +   N   T++  E E E++    +++ 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQ- 122

Query: 122 AENSRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKVAERVEQL 163
            E   K+   WWR +   + L +    +  L  L+ +V E+V QL
Sbjct: 123 NERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of Bhi09G002338 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 105.9 bits (263), Expect = 3.2e-23
Identity = 63/178 (35.39%), Postives = 100/178 (56.18%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFC 60
           ++ T GRQKIE+KK+E +S+ QVTFSKRR GLFKKASEL  L G E+ +IVFSP  K+F 
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 61  FGHPDVDVLLDRYLTGNLSPP--KQAESYIPVAE---------FNRDFTDIALEFEAEKK 120
           FGHP V  L+ R+   N +        + + + E          N   T++    E EK+
Sbjct: 62  FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQ 121

Query: 121 RAAELIRAAENSRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKVAERVEQLTSIRI 168
           +   ++   + SR+  G W+ + V+ + + E  +  SAL +++ K+   + Q + + +
Sbjct: 122 KRM-VLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQYSQVNV 178

[Close]

BLAST of Bhi09G002338 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.5e-30
Identity = 74/163 (45.40%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFC 60
           +KK+ GRQKIE+ K++ +S+ QVTFSKRR GLFKKASEL  LCG EVAI+VFSP  K+F 
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPDVDVLLDRYLTGNLSPPKQAESY--------IPVAEFNRDFTDIALEFEAEKKRAA 120
           FGHP+VD ++DR++  N  PP Q  +           V + N   T +  + E EKK+  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 ELIRAAENSRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKV 156
           EL +  E ++  G  WW + VE + L +L+ F+  L NL+  V
Sbjct: 122 ELKKIREKTKALGN-WWEDPVEELALSQLEGFKGNLENLKKVV 163

[Close]

BLAST of Bhi09G002338 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.6e-27
Identity = 77/160 (48.12%), Postives = 103/160 (64.38%), Query Frame = 0


Query: 2   KKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFCF 61
           K+++GRQKI + K++K+S +QVTFSKRR GLFKKASEL  LCG E+ IIVFSP  K F F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPDVDVLLDRYLTGN---LSPPKQAE-SYIPVAEFNRDFTDIALEFEAEKKR--AAELI 121
           GHP V+ +LDRY++ N   L+  +Q + S     E N   T I  E E EKK+  A E +
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 RAAENSRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKV 156
           R  E+ R++   WW + VE M + +L+E + AL  LR  V
Sbjct: 179 R-KESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Bhi09G002338 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-23
Identity = 68/168 (40.48%), Postives = 101/168 (60.12%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFC 60
           +KKTLGR+K+EI K+ K+S+ QVTFSKR+ GLFKKASE   LC  ++A+IVFSP  K+F 
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPDVDVLLDRY----LTGNLSPPKQAESYIPVAEFNRDFTDIALEFEAEKKRAAELIR 120
           FGHP+VDVLLD +    +  N +   ++ + + V   N+ +T++  E E E+K       
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQS--- 121

Query: 121 AAENSRKNGGF--WWREAVEGMRLKELKEFRSALMNLRAKVAERVEQL 163
            A+N R+N     WW ++   + L +       L +L+  V E+  QL
Sbjct: 122 RAQNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQL 166

[Close]

BLAST of Bhi09G002338 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.1e-23
Identity = 64/165 (38.79%), Postives = 97/165 (58.79%), Query Frame = 0


Query: 2   KKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFCF 61
           +K LGR+KIE+ K+  +S+ QVTFSKRR GLFKK SEL  LC  E+AIIVFSP+ K + F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPDVDVLLD----RYLTGNLSPPKQAESYIPVAEFNRDFTDIALEFEAEKKRAAELIRA 121
           GHP+V+ LLD    R +  N +   ++ + + +   N   T++  E E E++    +++ 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQ- 122

Query: 122 AENSRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKVAERVEQL 163
            E   K+   WWR +   + L +    +  L  L+ +V E+V QL
Sbjct: 123 NERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of Bhi09G002338 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-18
Identity = 56/163 (34.36%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 5   LGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFCFGHP 64
           +GR+KI+++ ++  +++QVTFSKRR GLFKKASELA LC  E+ I+VFSP  K F +G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 65  DVDVLLDRYL----TGNLSPPKQAESYIPVAEFNRDFTDIA-LEFEAEKKRAAELIRAAE 124
           ++D + +R++      +    +++ +Y P  +   +  D+   E EAEK+R     ++ E
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGE---KSQE 120

Query: 125 NSRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKVAERVEQL 163
                G   ++E++E + L EL E++  L  +  ++  +V  L
Sbjct: 121 KLESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHL 160

[Close]

BLAST of Bhi09G002338 vs. ExPASy TrEMBL
Match: A0A5D3D807 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001020 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.2e-79
Identity = 152/170 (89.41%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFC 60
           MKKTLGRQKIEIKKLEKKSSKQVTFSKRR GLFKKA EL++LCG EVAIIVFSPNDK+FC
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 60

Query: 61  FGHPDVDVLLDRYLTGNLSPPKQAESYIPVAEFNRDFTDIALEFEAEKKRAAELIRAAEN 120
           FGHPDVDVLLDRYLTGNLSPPK AESYIPVAEFNRDF D ALEFEAEKKRAAELIRAAE+
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 120

Query: 121 SRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKVAERVEQLTSIRIGGP 171
           SRKNGGFWW+EA EGMRL+ELK+FRSALM+LRAKVAERVE+LT++RIGGP
Sbjct: 121 SRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGP 170

[Close]

BLAST of Bhi09G002338 vs. ExPASy TrEMBL
Match: A0A1S3CRI8 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.2e-79
Identity = 152/170 (89.41%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFC 60
           MKKTLGRQKIEIKKLEKKSSKQVTFSKRR GLFKKA EL++LCG EVAIIVFSPNDK+FC
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 68

Query: 61  FGHPDVDVLLDRYLTGNLSPPKQAESYIPVAEFNRDFTDIALEFEAEKKRAAELIRAAEN 120
           FGHPDVDVLLDRYLTGNLSPPK AESYIPVAEFNRDF D ALEFEAEKKRAAELIRAAE+
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 128

Query: 121 SRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKVAERVEQLTSIRIGGP 171
           SRKNGGFWW+EA EGMRL+ELK+FRSALM+LRAKVAERVE+LT++RIGGP
Sbjct: 129 SRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGP 178

[Close]

BLAST of Bhi09G002338 vs. ExPASy TrEMBL
Match: A0A0A0LE01 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.2e-79
Identity = 152/170 (89.41%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFC 60
           MKKTLGRQKIEIKKLEKKSSKQVTFSKRR GLFKKA EL++LCG EVAIIVFSPNDK+FC
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHPDVDVLLDRYLTGNLSPPKQAESYIPVAEFNRDFTDIALEFEAEKKRAAELIRAAEN 120
           FGHPDVDVLLDRYLTGNLSPPK AESYIPVAEFNRDF D ALEFEAEKKRAAELIRAAE+
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 128

Query: 121 SRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKVAERVEQLTSIRIGGP 171
           SRKNGGFWW+EAVEG+RL+ELK+FRSALM+LRAKVAERVE+LT++RIGGP
Sbjct: 129 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGP 178

[Close]

BLAST of Bhi09G002338 vs. ExPASy TrEMBL
Match: A0A6J1H4M6 (agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC111460353 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.3e-76
Identity = 145/170 (85.29%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFC 60
           MKKTLGRQKIEIKKLEKKSSKQVTFSKRR GLFKKA EL++LCG EVAIIVFSPNDK+FC
Sbjct: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72

Query: 61  FGHPDVDVLLDRYLTGNLSPPKQAESYIPVAEFNRDFTDIALEFEAEKKRAAELIRAAEN 120
           FGHPDVDVLLDRYLTGNLSPPK AESY+PVAEFNRDF D+ LEFEAEKKRA ELI+A+E 
Sbjct: 73  FGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEE 132

Query: 121 SRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKVAERVEQLTSIRIGGP 171
           SR +GGFWW EAVEGMRL+ELKEFRS+LM+LRAKVAE+VE+LT++RIGGP
Sbjct: 133 SRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGP 182

[Close]

BLAST of Bhi09G002338 vs. ExPASy TrEMBL
Match: A0A6J1KVC9 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 144/170 (84.71%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRVGLFKKASELAILCGVEVAIIVFSPNDKIFC 60
           MKKTLGRQKIEIKKLEKKSSKQVTFSKRR GLFKKA EL++LCG EVAIIVFSPNDK+FC
Sbjct: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72

Query: 61  FGHPDVDVLLDRYLTGNLSPPKQAESYIPVAEFNRDFTDIALEFEAEKKRAAELIRAAEN 120
           FGHP+VDVLLDRYLTGNLSPPK AESY+PVAEFNRDF D+ LEFEAEKKRA ELI+A+E 
Sbjct: 73  FGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEE 132

Query: 121 SRKNGGFWWREAVEGMRLKELKEFRSALMNLRAKVAERVEQLTSIRIGGP 171
           SR +GGFWW EAVEGMRL+ELKEFRS+LM+LRAKVAE+VE+LT++RIGGP
Sbjct: 133 SRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGP 182

The following BLAST results are available for this feature:

BLAST of Bhi09G002338 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	2.5e-31	45.40	AGAMOUS-like 62	[more]
AT2G24840.1	2.5e-28	48.13	AGAMOUS-like 61	[more]
AT1G65360.1	1.0e-24	40.48	AGAMOUS-like 23	[more]
AT1G01530.1	2.9e-24	38.79	AGAMOUS-like 28	[more]
AT4G36590.1	3.2e-23	35.39	MADS-box transcription factor family protein	[more]

BLAST of Bhi09G002338 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	3.5e-30	45.40	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	3.6e-27	48.13	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O80807	1.4e-23	40.48	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
Q9LMM8	4.1e-23	38.79	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O64703	1.8e-18	34.36	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]

BLAST of Bhi09G002338 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D807	3.2e-79	89.41	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CRI8	3.2e-79	89.41	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4...	[more]
A0A0A0LE01	4.2e-79	89.41	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE...	[more]
A0A6J1H4M6	3.3e-76	85.29	agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC11146035...	[more]
A0A6J1KVC9	1.3e-75	84.71	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 101..124
None	No IPR available	PANTHER	PTHR11945:SF580	AGAMOUS-LIKE MADS-BOX PROTEIN AGL62	coord: 6..162
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 6..162
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 7..27 score: 51.12 coord: 27..42 score: 66.47 coord: 42..63 score: 40.19
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 e-value: 5.3E-31 score: 119.0
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 15..61 e-value: 2.0E-23 score: 81.7
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 7..61
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 5..65 score: 26.015703
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 17..85 e-value: 1.3E-25 score: 91.0
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 6..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M002338	Bhi09M002338	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding