Bhi09G002263 (gene) Wax gourd (B227) v1

Overview
NameBhi09G002263
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionProtein HAPLESS 2 isoform X1
Locationchr9: 72478382 .. 72480816 (-)
RNA-Seq ExpressionBhi09G002263
SyntenyBhi09G002263
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAATGTAGCCAGTTCATTGACCTCTGGTATTTTTTCGGCCATTGGCAAAGTCTTTGGATCTCCACTTGATTTTCTCTCTGGAAGATCCTGCAGGTTGGTTCCCTTATTTGCTTTTGATTTTCTCAGCATGTGGCTTCTATCCGTAAACTTAATCATTTACCTGATTTTGTCACGTTGTGTGTTTTCTCTATTGAATACTGATTACCTGATTTTGTCGTATTTTTTTCGTTTTGATTTGAGTATTGTTTACCTGTTTTTGTCACTGCTTGCACATGTTCGCAGTTCAGTTTGTGGATCAACATGGGATTTCATATGCTACATAGAAAATTTCTGTGTTTCCAATTTGCTAAAGATGGGAATGGTCTTGATCCTTTCATACTTTGGTGAGTGAAACAATATAGTTTTTGTGTACGTCTGTACTAATATGCTGGAATTTCTCCGTTTTCCATGGTTTCGAGAAAGCAGCTAAATCCTTGCATAGCGAGGTCCGAAGTTATCTAAAAGTACTACTTAGGTTAAATTATCTAAAAGTACTACTTAGGTTAAATTATAAGTTTAGTCTCTCAAGTTTAAAGTTTGAGCCTATTAATACTTTAACTTTTAAAATTATCTAATAGACCCCCGACTTTCAATTGTCTAATAAATCCTTGAACTTTCAATCTTTTGTGGTCCTTAACAAATTTAAGATTGTTAAAATTCTTTTTCTATTTTCTAGTAAATCGGTGGATTTTAAAAAGTTTGAATGTGATGGGATTAAATTTGTAATTTTGAAAGTTTAGAGACCAAACAAACACACCGTTTGGTGACTAACTTATATTCTAACGTACAACTTCATATATAAGCCCGGTTAATTATGTAAGCATAGCAAGGTTACCAACATATTTCATTACAAGTTACAACCAAGTTACACTATTACGATCTAGTTTCTCTTATTTATAAAACATTTCCAGTTCAATAGTTTAAACTAATTTAATATAGTGTGGAAACATGTCATTGTTTCTTCTATGTTTTGAAATGTATTAATTCATATCTCTCAACTTTTTTAGCGGCCAAATTAAAGTTGCTAACATCAGTAACTTACTGTATATTATATAATGATAAAATGCTGAATAACCTTATATGGTATGGGAAAATGTAGCTATTTTCCCTGTGTTTCGAAATGTGATGACTTCTAGTTATCATCAAATGAAGTTTTAGGCCATCAAGTATATGGCTTACTGATGTAATTGCAATGTGATAGGGAATACACTCTAATGTTTATTGTATAATAATGTTTATATATCTATAACCTTATACTACTATACCTGGTATGACTCTAAATCATATGCTCACAAGATAAAAAGAAATTTCTCAAGAAAGGCCGAAGGGATCCAAATCCAGTCTAGATGTTTTAGTTACAAACTTACAAGTCATAATGACAATTTTAAATCATTAGAACTAGGGGTGTTCAAACCCGACAACCCGAACAACCCGGACTACCCAACCCAAAATATAAGGGTTGGGTTGGGTTAGTTTTGTTTTTGGGTTGGGTTGGGTTGGGTTAAGCTTTCTCTATTTTTGTTGGGTTGGGTTGGGTCATGGGTTGGCTAAAAAAAATTTGGGTTGACCCAACCCAACCCGAATTTTATATATATAAATAAAATATACTATATATATTTATCTTTGTTTAAAATTTGATTACTTTGTGAATTTTAAATATTTTTATTTTAAAATTGTTATGATATTTGTCTTTATTTGAAGTTTGCAATAAATATCTTTGGTATAATTGATATTTAGCATTTGAATTTGATGAGATTTTAGTTATTAGTAATGTGTTGTATATATTTTTACATATTTTTAATTAAAAAGAAAAAAAAAACAAATTATAACCCGACAACCCAACCTAACCCAACCCAACTCATTGCTAATCCAACCAACCCGAATTTTCGAGTTGATCCAAAAAACACCCTCAACCTAACACAACCCAATCCATGTATACCCTTAATTAGAACCTAAGAAGCATGGACAAACTTACACGGACATGGCGATATGCCAATTTAAAACAAAACAAGGACATTGACACGTTGGGATACAGTTTTTTTTTTTTTTTTTTTTTTTAAATAAATGATCATGTTTGGGCTTTAAATTTGGGTCTGGCATAAAAGATTAGACCATTTTCTCTTTACTCAAGCATATCCAGGAAGTGTCCCAAATATGTCCACACGTGCCTGAAACCAAAAATAGGACACAAAATTGCGTGTCAGACATGTATTTGGAGCGTTTTGACATGGACACTCAGCCTAAAATGAGTGTACATGCTTCATAACTTAAAACTTAGTACCAAATAATACATGTGCATTTTTGTTTGTTGATTATTACTTAGAACATTAGTTCAGCACTTGAATTTGCCTTTATCTATGCAGTTCTTTTATTCCTATGTTTATTACATAA

mRNA sequence

ATGGGTAATGTAGCCAGTTCATTGACCTCTGGTATTTTTTCGGCCATTGGCAAAGTCTTTGGATCTCCACTTGATTTTCTCTCTGGAAGATCCTGCAGTTTGTGGATCAACATGGGATTTCATATGCTACATAGAAAATTTCTGTGTTTCCAATTTGCTAAAGATGGGAATGGTCTTGATCCTTTCATACTTTGTTCTTTTATTCCTATGTTTATTACATAA

Coding sequence (CDS)

ATGGGTAATGTAGCCAGTTCATTGACCTCTGGTATTTTTTCGGCCATTGGCAAAGTCTTTGGATCTCCACTTGATTTTCTCTCTGGAAGATCCTGCAGTTTGTGGATCAACATGGGATTTCATATGCTACATAGAAAATTTCTGTGTTTCCAATTTGCTAAAGATGGGAATGGTCTTGATCCTTTCATACTTTGTTCTTTTATTCCTATGTTTATTACATAA

Protein sequence

MGNVASSLTSGIFSAIGKVFGSPLDFLSGRSCSLWINMGFHMLHRKFLCFQFAKDGNGLDPFILCSFIPMFIT
Homology
[Close]
BLAST of Bhi09G002263 vs. TAIR 10
Match: AT1G21722.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78922.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 42; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 2.2e-05
Identity = 21/33 (63.64%), Postives = 24/33 (72.73%), Query Frame = 0 

Query: 1  MGNVASSLTSGIFSAIGKVFGSPLDFLSGRSCS 34
          MGNV  S  +G   +IG  FGSPLDFLSG+SCS
Sbjct: 1  MGNVMDSFFTGFSHSIGNFFGSPLDFLSGKSCS 33

[Close]
BLAST of Bhi09G002263 vs. ExPASy TrEMBL
Match: A0A803QLH3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.9e-14
Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = 0 

Query: 1   MGNVASSLTSGIFSAIGKVFGSPLDFLSGRSCSLWINMGFHMLHRKFLCFQFAKDGNGLD 60
           MGNV  S  SG     G +F SPLDFLSG+SCS+W NMGFH+LHR+FLC QFAK G  + 
Sbjct: 219 MGNVIESFFSGFGKVFGSLFASPLDFLSGKSCSMWQNMGFHLLHREFLCGQFAKIGLSIS 278

Query: 61  PFILCSFI 69
             + CS I
Sbjct: 279 SALHCSVI 286

[Close]
BLAST of Bhi09G002263 vs. ExPASy TrEMBL
Match: A0A1S4DVV8 (protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 1  MGNVASSLTSGIFSAIGKVFGSPLDFLSGRSCS 34
          MGNVASSL S +FSAIGK+FGSPLDFLSGRSCS
Sbjct: 1  MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCS 33

[Close]
BLAST of Bhi09G002263 vs. ExPASy TrEMBL
Match: A0A5D3E285 (Protein HAPLESS 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00030 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 1  MGNVASSLTSGIFSAIGKVFGSPLDFLSGRSCS 34
          MGNVASSL S +FSAIGK+FGSPLDFLSGRSCS
Sbjct: 32 MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCS 64

[Close]
BLAST of Bhi09G002263 vs. ExPASy TrEMBL
Match: A0A0A0L1V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 1  MGNVASSLTSGIFSAIGKVFGSPLDFLSGRSCS 34
          MGNVASSL S +FSAIGK+FGSPLDFLSGRSCS
Sbjct: 1  MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCS 33

[Close]
BLAST of Bhi09G002263 vs. ExPASy TrEMBL
Match: A0A6J1IVE5 (uncharacterized protein LOC111480312 OS=Cucurbita maxima OX=3661 GN=LOC111480312 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-05
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 1  MGNVASSLTSGIFSAIGKVFGSPLDFLSGRSCS 34
          MGNVASSL SG+F A+ KVFGSPLDFLSG+SCS
Sbjct: 8  MGNVASSLASGLFLALNKVFGSPLDFLSGKSCS 40

The following BLAST results are available for this feature:
BLAST of Bhi09G002263 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G21722.12.2e-0563.64unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
BLAST of Bhi09G002263 vs. TAIR 10
Match NameE-valueIdentityDescription
BLAST of Bhi09G002263 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A803QLH35.9e-1458.82Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A1S4DVV81.6e-0687.88protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1[more]
A0A5D3E2851.6e-0687.88Protein HAPLESS 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A0A0L1V01.6e-0687.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1[more]
A0A6J1IVE52.2e-0581.82uncharacterized protein LOC111480312 OS=Cucurbita maxima OX=3661 GN=LOC111480312... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M002263Bhi09M002263mRNA