Bhi09G002262 (gene) Wax gourd (B227) v1

Overview
NameBhi09G002262
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionprotein HAPLESS 2 isoform X1
Locationchr9: 72477892 .. 72478341 (-)
RNA-Seq ExpressionBhi09G002262
SyntenyBhi09G002262
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATATGGACGTGTTTAGCTTCCTATTTCTATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGAAGACGACACCTTAGGAGAAGAGACCTGGAAGAAGAGTTTGAAAGCGAAGAAGGAAAATGTCAACATGGGTCAACAAGCGACTCGAGCAATGTCCCTGAACATGTCGAGTCGAGAAGTAGCAGACGGGCATGTCGTCGATGGAGGAGGAACCACAGAAGTTCTCGAATGAGAAAATCGTTGAGGCCGAGAGGTCATGGAATTCGAGTAAGGAGTGGTAGAGTGCTGGTCTATGGTAAGCATAGAAGAAAATCTGTTGAGGTTGGGAATCATTTGAATGAGATACATAGCTTTGGGATGTATGGATCATCCAAATTTGTGCATAAAGAAAGAAAATACAGAAGAGAAAGCCAAAGATGA

mRNA sequence

ATGATATGGACGTGTTTAGCTTCCTATTTCTATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGAAGACGACACCTTAGGAGAAGAGACCTGGAAGAAGAGTTTGAAAGCGAAGAAGGAAAATGTCAACATGGGTCAACAAGCGACTCGAGCAATGTCCCTGAACATGTCGAGTCGAGAAGTAGCAGACGGGCATGTCGTCGATGGAGGAGGAACCACAGAAGTTCTCGAATGAGAAAATCGTTGAGGCCGAGAGGTCATGGAATTCGAGTAAGGAGTGGTAGAGTGCTGGTCTATGGTAAGCATAGAAGAAAATCTGTTGAGGTTGGGAATCATTTGAATGAGATACATAGCTTTGGGATGTATGGATCATCCAAATTTGTGCATAAAGAAAGAAAATACAGAAGAGAAAGCCAAAGATGA

Coding sequence (CDS)

ATGATATGGACGTGTTTAGCTTCCTATTTCTATGCATGGGAGTACTGCTGCACTTTCATGTGTATCAAGCTTGCCAGTGTCAAAAGAACAAGAAGACGACACCTTAGGAGAAGAGACCTGGAAGAAGAGTTTGAAAGCGAAGAAGGAAAATGTCAACATGGGTCAACAAGCGACTCGAGCAATGTCCCTGAACATGTCGAGTCGAGAAGTAGCAGACGGGCATGTCGTCGATGGAGGAGGAACCACAGAAGTTCTCGAATGAGAAAATCGTTGAGGCCGAGAGGTCATGGAATTCGAGTAAGGAGTGGTAGAGTGCTGGTCTATGGTAAGCATAGAAGAAAATCTGTTGAGGTTGGGAATCATTTGAATGAGATACATAGCTTTGGGATGTATGGATCATCCAAATTTGTGCATAAAGAAAGAAAATACAGAAGAGAAAGCCAAAGATGA

Protein sequence

MIWTCLASYFYAWEYCCTFMCIKLASVKRTRRRHLRRRDLEEEFESEEGKCQHGSTSDSSNVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRESQR
Homology
BLAST of Bhi09G002262 vs. TAIR 10
Match: AT1G21722.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78922.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 42; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 2.0e-05
Identity = 45/147 (30.61%), Postives = 65/147 (44.22%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASVKRTRRRHLRRRDLEEEFESEEGKCQHGSTSDSS 60
           ++W  ++ +FY   YCC+F C  L   KR RRR    R +EE+++            D+S
Sbjct: 90  LLWVLVSCWFYMLGYCCSFFCYDLLHSKRRRRRR-HNRYIEEDYD------------DNS 149

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           +  + V+   S    R  R   +  R+RKSLRPR H +RV         K  R    +  
Sbjct: 150 DDDDDVDDDGSFTYHRSKRECRKEERLRKSLRPRNHRVRVG------VRKDHRSDSGLSQ 209

Query: 121 HL---NEIHSFGMYGSSKFVHKERKYR 145
           H    + IH   +   SKF  K  K R
Sbjct: 210 HADGGSPIHGVRVSRESKFARKVSKRR 217

BLAST of Bhi09G002262 vs. ExPASy TrEMBL
Match: A0A1S4DVV8 (protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 132/149 (88.59%), Postives = 139/149 (93.29%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASVKRTRRRHLRRRDLEEEFESEEGKCQHGSTSDSS 60
           MIWTCLASYFYAWEYCC+FMCIKLASVKRTRRRH+RRRDLEEEFESEEGKCQH STSDSS
Sbjct: 90  MIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRRRDLEEEFESEEGKCQHESTSDSS 149

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           NV EHVESRSSR + RRWRRNH+ S+ RKSLRP+GHG+RVRSGRVLVYGKHRRKSVEVGN
Sbjct: 150 NVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 209

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
           H NEI SFGMYGSSKFVHKERKYRR  QR
Sbjct: 210 HSNEIDSFGMYGSSKFVHKERKYRRGRQR 238

BLAST of Bhi09G002262 vs. ExPASy TrEMBL
Match: A0A1S3B9T1 (uncharacterized protein LOC103487604 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 132/149 (88.59%), Postives = 139/149 (93.29%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASVKRTRRRHLRRRDLEEEFESEEGKCQHGSTSDSS 60
           MIWTCLASYFYAWEYCC+FMCIKLASVKRTRRRH+RRRDLEEEFESEEGKCQH STSDSS
Sbjct: 46  MIWTCLASYFYAWEYCCSFMCIKLASVKRTRRRHVRRRDLEEEFESEEGKCQHESTSDSS 105

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           NV EHVESRSSR + RRWRRNH+ S+ RKSLRP+GHG+RVRSGRVLVYGKHRRKSVEVGN
Sbjct: 106 NVLEHVESRSSRWSSRRWRRNHKDSQKRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 165

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
           H NEI SFGMYGSSKFVHKERKYRR  QR
Sbjct: 166 HSNEIDSFGMYGSSKFVHKERKYRRGRQR 194

BLAST of Bhi09G002262 vs. ExPASy TrEMBL
Match: A0A0A0L1V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.7e-63
Identity = 127/149 (85.23%), Postives = 137/149 (91.95%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASVKRTRRRHLRRRDLEEEFESEEGKCQHGSTSDSS 60
           MIWTCLASYFYAWEYCC FMCIKLASVKRTRRRH+RRRD+EEEFE EEGKC+H STSDS+
Sbjct: 90  MIWTCLASYFYAWEYCCGFMCIKLASVKRTRRRHVRRRDMEEEFEIEEGKCRHESTSDST 149

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           NV EHVES+SSRR  +RWRRNHR S+ RKSLRP+GHG+RVRSGRVLVYGKHRRKSVEVGN
Sbjct: 150 NVLEHVESKSSRRVSQRWRRNHRDSQRRKSLRPKGHGVRVRSGRVLVYGKHRRKSVEVGN 209

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
           HLNEI SFGMYGSSK+VHKERKYRR   R
Sbjct: 210 HLNEIDSFGMYGSSKYVHKERKYRRGRPR 238

BLAST of Bhi09G002262 vs. ExPASy TrEMBL
Match: A0A6J1DMF3 (uncharacterized protein LOC111021352 OS=Momordica charantia OX=3673 GN=LOC111021352 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 8.5e-52
Identity = 110/149 (73.83%), Postives = 126/149 (84.56%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASVKRTRRRHLRRRDLEEEFESEEGKCQHGSTSDSS 60
           M WTC+ASYFYAW+YCCTFMCIKL SVKRTRRR  RRRDLEEEFESE GK ++GS+SDSS
Sbjct: 97  MTWTCIASYFYAWDYCCTFMCIKLGSVKRTRRRRHRRRDLEEEFESEGGKHRYGSSSDSS 156

Query: 61  NVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVGN 120
           +VPE +E RSS+RA RRWR NHR S+MRK+LRP+  GIRVRSGR LVYGKHRRKS EV N
Sbjct: 157 SVPERIELRSSQRASRRWRMNHRGSQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVN 216

Query: 121 HLNEIHSFGMYGSSKFVHKERKYRRESQR 150
            L EIHS G +GSSKFVH+E +Y+R  Q+
Sbjct: 217 RLGEIHSLGRHGSSKFVHEEIRYKRGRQK 245

BLAST of Bhi09G002262 vs. ExPASy TrEMBL
Match: A0A6J1FIX0 (uncharacterized protein LOC111445893 OS=Cucurbita moschata OX=3662 GN=LOC111445893 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.6e-34
Identity = 94/149 (63.09%), Postives = 105/149 (70.47%), Query Frame = 0

Query: 1   MIWTCLASYFYAWEYCCTFMCIKLASVKRTRRRHLRRRDLEEEFESEE-GKCQHGSTSDS 60
           MIWTCLASY +AWEYCCTFMCIKLASVKRTRRRH RRRDLEEE ESEE  K ++GS+SDS
Sbjct: 97  MIWTCLASYCHAWEYCCTFMCIKLASVKRTRRRH-RRRDLEEELESEEDAKYRYGSSSDS 156

Query: 61  SNVPEHVESRSSRRACRRWRRNHRSSRMRKSLRPRGHGIRVRSGRVLVYGKHRRKSVEVG 120
           SN  + +ESR S+R  R+ RR+HR S+  K+LRP  HGIRVRSGRVLVY KH        
Sbjct: 157 SNDSKKIESRRSKRVSRKRRRSHRGSQTSKTLRPPSHGIRVRSGRVLVYSKH-------- 216

Query: 121 NHLNEIHSFGMYGSSKFVHKERKYRRESQ 149
                       GSSK V KER YRR  Q
Sbjct: 217 ------------GSSKIVQKERNYRRGRQ 224

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G21722.12.0e-0530.61unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S4DVV81.4e-6588.59protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1[more]
A0A1S3B9T11.4e-6588.59uncharacterized protein LOC103487604 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0L1V01.7e-6385.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1[more]
A0A6J1DMF38.5e-5273.83uncharacterized protein LOC111021352 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1FIX03.6e-3463.09uncharacterized protein LOC111445893 OS=Cucurbita moschata OX=3662 GN=LOC1114458... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..95
NoneNo IPR availablePANTHERPTHR35278:SF1F8K7.16coord: 1..147
NoneNo IPR availablePANTHERPTHR35278TRANSMEMBRANE PROTEIN-RELATEDcoord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M002262Bhi09M002262mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane