Bhi09G002235 (gene) Wax gourd (B227) v1

Overview
NameBhi09G002235
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionGlutaredoxin-like protein
Locationchr9: 71584891 .. 71590315 (+)
RNA-Seq ExpressionBhi09G002235
SyntenyBhi09G002235
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACACAGTTCCAAAATTCCAATCTTGGGGCAACCAGCGAGCAGCAAGAATGATATCTGCAACTACTGCGTTAATAGGGCGACCTTCTTCTTCTTCACCATTATCATTACTCCTAAAAGCTAAAACACCTCGTCGGATTTTGATCCCTTCGGCTTCATTTTCCTCATCTCTTCCCTCTCGGAAACTCATTCTGTACTCCAAACCCGGATGCTGTTTGTGCGACGGCCTCAAAGAGAAACTACAAGTCGCCTTTCTGCTCGCCGGCCCCGATTCTCTCCACGACGTCGATTTACAGGCACTCATTTCAGTCCCCTTTTATTTGTATTTCTAATTCCTTTCGTGTTGGAAGCGCTTCGATTTGATTTGTTCTCTTTGGTTTCAAGCAGGTGAGGGATATCACTACTAACCCAGAATGGGAGAAAGCTTACAAGTACGAGATTCCCGTGCTCGCAAAAGTGCGCTCTGATGGCTCCGAGGTTGGTTCTATTCATACTTGTGATTCTGATTAGTATGAGCCTGTATTTTGGTGGTTTTAGCTTAATAGGAAAAGGAGAGTGTCTATTTCAGATATGCAACGCTTGTGCATTGATCCGATTAGGAGATTTTCTCGTCCTCCACTTGTTTTTAGAGCCTTGGCTGGAGTTTTACTGAGTTTCTATTTCCCAAACTTCTGTGACACTACGTTAGTAACCCCTTGCTCTTTCATTTTTCATTCGAGTTTGAGGTTCCAACGAGTTGTTCACCTCATCTTCTGTTCTCATTTAAGTTATTATGAATCCAGTTGGGTCTGTGATTAATCCAACAAGGAAGGCTTTTATCAACATACTGGTAATTCTTTTCTATCTGCTTGATTCAAGTAATTATTGTTCTAGTTTTATAATTTTTGTTTACGGACTGTTTAAGTATTTTGTTTCCTATGTTTGTTTCTCCCTATCCTGTCTCGCCATACTCATCTGGTATAATGCAGAAATTAAGCCAGTTGTAGTTTGCCTAAAGTCATATCAATGTAGAAAGATTAAAAAAAAACAACAACTAAAAAAGAAAAGAAAAATACTGCAATCTAGCATCCTGAACTACTAAATGGTTAATTTCTTCAATGAAGATCTGGTGTGCAATGTATCCGGACCACTACATTAACGATTTCCTCTAAAAATACGTTTCTTTGGTGAAACTGAGACACTCAGCTTTGGTAGTTGTACTACATTGTAGGAATCAGTATGGAACAAAGAACCATACCGAATCAATATGACATGCAACAAAAGAAATATTTTGGTGAATGGCTTTCATGAAAGCTCATTTGGATCTATCCACAATAACATTACTGATAAAAATGTCTTGAATACCAGTGAATCAAGAGGGCTTTACCAATGATGGCTTGTTGAAAGGATGATAACGTTTGAATAAACTCGACAGATTTGCTCATATATGTTGATCTTGTGAATTTTCTGAATCACCTGGCATCTTAAACTAAAGAATCAGGTTGATAACATTAATACTATCTATTGTTAAACAGGCAGAGGCCTATTTCAATAGAAACTTCTATGTGGAAAGATAGACCTGACACAGAAGCCTCTCGTACTATAAAAGTTGCACCTAGACCTATATACCTTCCTGGTTACTACTAGTTCCATTTTCTGTGCTTAAATGTTCTGTAAACTAAGCTCACTAGACCTATATACCTTCCTGGAACTCTTTGTATGAGCAAATGTGATGTGGGTTTCGTTCTTAGGGATGAAAATATGAAACACGTAAGGTATGGAAGGGTTTTACTGTGAACTGTCAAAATCAGAATGACAAACAAGGTGGCGATATGGTAAAGAAAAAATCAATATATATGGAAATTTATGCAACTCAGAGATCCATATATTCTAAATATTCTCACATATTAGTTTCATCACTCTGTTAGTACAGCAAGTTAACATTTGGAAAGTTCTAAGTAGTGAATGTAATTTGCTCCTTAATCACCCCTCAACCATGGATGAGATTGAGTTTCTCATCTAAGTGGCATCTGTGAAGAAAAGAATGCAAAGATAATCAACACAAAATGTCGAACTATTCCTTTTTGGTTTTTGCTGTGATGCCAAAACTTTATAGCCCTCCTTTTTGGGCACAGGGAGTTTCCTTCTGAGGAGGCGCCTTACTCATTTTCAATTATTCTTGTACAACTCTTTTCTAGTTTGACTGAGAGGTAATTGTTGCTAAATAGTGTTACTTAGAGGTTTGCTTTTTGATTGGCAAGATTCAGAGGAAAGGATAATAAAAAAAAATCAGTTACGAAAGAAGACAAGAGATCTTCATATAAGCCAACTTACAAATATCCGTCTCAATTGGCAAGAATCAAAGGAAAGGGTTATAATCCCAAAAATCTATGGAAAGAATATGGCATAACTCTGCAAATCTTGAATATATGACCAGTCCATTTATGCTATGTCATCATGAGGATAGCTCAACAATTAAGACATTTTTACTTCCTTGAAGAAGTCGAGGGGTGTTTGGGCCCCAACTTCAAGTGGATGGAGTGGGCTATTGTGGGGCTCCAATCATAATAATTGGTGTTTCCAACTATTATAACCTACAATTAACTACATTGTTACTATTTCAAATCTCTCTTTGTTACGGTGTTTATTATTTCCTACTTAGATTAAAATAGTTTACACCCTAGACACAAACTATTATAATCTGCACCTTAGACACAAACTATTATAATCCAGACTAAACTAGTTTGCTACTCAAAACTATTTTAACCTATAGTCTATTGTAACAAACAGACTATAATAACCAACTCAACGTCTCAAACACTCCATCATAGATTCAACTCTCCACCTCATATGTTGTAATATGGCTGATACATTTACTAAAAGTGGGAAATATTATAGTACATATTTCCAATCGGACATCTTTCCTGACAAGGTAGCATGCTTTGTGGATAACCTTGTTCTTTCTTCTCCCAAATTGTATGCTGAATATGTCACTTGCTTTACCATGTTCATATCTCTCCTTGTCCTTTTCCTTTTCCTTTTGGGGTGGGGAGGTGTGAAAAGTACTTTTTATTTTATACTTTAGTAGTAATGTTTAATCTGATTTTTTTTTTTTTAAAAAAAAATATATATCTCGACTTAGATAGCTATTGTTTATTCTGATACTTGTTCCTGACTGGTTTTCGAGAAAATAAATTAGAACTATCTTGCAATCCCAGAAAATAAATCACTATGTAGTGTGGTTCTTAAAATTATATATTCTATAATAAAATTTGGAAGTTGCACATTCCCTTGGGATATGTTGATTATAAGATGTTGCATCTTGTTCATTTTTTTCTTTTAGTTTTTGTGCATTCATGGAGACTTTTGTAAGTCATGCTTCTGTTTACTTAGGTCTAATGCCTTCATCTTTTTCTGCCTACTTTTGGACTCTCTTTATATGATGCCTTGTACAATTTGATTTTGTGTTGATAGTTTAGTTTAATTTTCTTTCCCCATTCTTAACGTCATTCCAAACTTTACGAATATTTTGCAACATTAAGATTATTCTGTGGATATATTGTCTTTTCTTGGAGTTCCCGTAAAATTTGCCATAATTTGTCTCTCTTTTGGATGTTATACAGCTCGTAAATTTTCAAAATTATGATAACCTATATACTTAAAGTAATCGTGTGATTAGCATTAGCTTCATATGTTTTTATCTACAAAAAGATTCTCTTTTAAATGAAAGCGTTCAAGATTACCATTCCTCTGATGTTTGACTTCTAAGCCTCAAAAGTAGTTAGAATTCTTGTACTTGCTAATATCCCACGTGTGATAGCTGCAGTCTGCAGATTTATAAATCTAGGTCGTCTATTTTTCTGTAATTTACTAAAGGAGTCGCATTTCATGTATTTCTATTCTAGTATCTTGTAAGAGATATGCAGGGTTAGAAATCTAGGTCAGGTGTATTAATTGTACAGTACACCTTTAAGTATGTTGTATTATAAACTGGTTTTAGTATTTAGTGGAGCTCAGGGATAGAAATTTAGCCTGGTATTGGCCTCCTCAAAGATCATGATAAACAGATGTTTATGTTTTATGTGTAGAAAAGACAGAGAAATTGCATGATGTAGCTAACTTGGCATGAGCGGCAGAATCAGGATAAAACAGAATTCAACAATGTGCAGATAAAATTGTCTTAAGATTGTTATATGAATAAAAACACATAAAATCAGAAAAATTAATAAACCTTGTATACAAGAGAACATCTGAACCCAATAAATTCACGTTGTCTTCACCCTAGTGCTAGAGTTTAGAGGGTAATTGTCTCTTAGAATAGAACAAATTACTTTTCCTATAGGAGCAACACCACTTCCACAAGGTCGACAAACTTTACTTTGTGGGGTATACCAAACTTTAACAAATTTTGAAATGGAGAAAATTTGTTATGCGAGAAAAATTTTGATAGTGAAGTGTAAAAATCAATTTAAAGAAGAAACATATATATAAACAAATTTATGGCCATTTGAATAGTTGTGTCTCTTCTTAAAATTGGTTGTTTATAAAAAGATGCATCCATTCATGAAAAAATATAACTTATGTAATTGAATGGATGCAACCCTAAACATTTCATTTATTCCAACAAAGATATGTATCATTTTAGATACCGAGTAATATTCCCATTTATTCCATTTGGGTTACTTGACATTGGAGTTATCCAGATGCATGTTAGAGTTTTCATCATCTCTGTTGCTTTTTTCTTTTTGGCTTCTATTTCTATCTCGAGTAGTCCTTTTCAGATATACTTAGTTACGCAGACGGCAAGTTAGCTTATTAATCTAGGTTCTGTGATTTTCATGCACCGTTCTTTTATATTTTGGTCTCGGGAGATTTCCTTATGTTATGTACCGTTTCGTGATGTCATAAACTACTAACATGCACTTGAAACACAAAAGCAATCACAGACAAATACTTACTGCTCCTGACTCATTGCTCACTGATGGATGTAGATTCCTTTTTTGTATTATTGTTCATCTTTTGACCCAATTTTCATACAAGGAAATTTACTTTAATTGATGGAATTCTCTTTAACACCAGTGCCACGTGTCAAATGAACCAAATTGATGTAATATTTGTGTTAAAAAAATCTTCTTAGACTCTAGAGATTTCTGTCCTTTCATATTTTTTCCCTCTCTTTTGGGTGCTTTTGCTTGGTTGAATATTTTTTAGTAATGCTAGACACATTGCTTCCCTTTTTCATGTGCAATTAAATTATTCATGAATCTGAAGTTCACATAGAAACTTTATACACTTTAGGATATGTTCTTTTGAATATTCGGGTTCATTTTACCTTACTATTTTTTTAAAAAAAATGAATAATTATGGCAGGAAGTACTTCCTCGGCTATCTCCTCGTCTGGGGGTGGAGTTTGTTCAGAAGAAACTGGCAGCTGCCCTACAGTAG

mRNA sequence

ATGAACACAGTTCCAAAATTCCAATCTTGGGGCAACCAGCGAGCAGCAAGAATGATATCTGCAACTACTGCGTTAATAGGGCGACCTTCTTCTTCTTCACCATTATCATTACTCCTAAAAGCTAAAACACCTCGTCGGATTTTGATCCCTTCGGCTTCATTTTCCTCATCTCTTCCCTCTCGGAAACTCATTCTGTACTCCAAACCCGGATGCTGTTTGTGCGACGGCCTCAAAGAGAAACTACAAGTCGCCTTTCTGCTCGCCGGCCCCGATTCTCTCCACGACGTCGATTTACAGGTGAGGGATATCACTACTAACCCAGAATGGGAGAAAGCTTACAAGTACGAGATTCCCGTGCTCGCAAAAGTGCGCTCTGATGGCTCCGAGGAAGTACTTCCTCGGCTATCTCCTCGTCTGGGGGTGGAGTTTGTTCAGAAGAAACTGGCAGCTGCCCTACAGTAG

Coding sequence (CDS)

ATGAACACAGTTCCAAAATTCCAATCTTGGGGCAACCAGCGAGCAGCAAGAATGATATCTGCAACTACTGCGTTAATAGGGCGACCTTCTTCTTCTTCACCATTATCATTACTCCTAAAAGCTAAAACACCTCGTCGGATTTTGATCCCTTCGGCTTCATTTTCCTCATCTCTTCCCTCTCGGAAACTCATTCTGTACTCCAAACCCGGATGCTGTTTGTGCGACGGCCTCAAAGAGAAACTACAAGTCGCCTTTCTGCTCGCCGGCCCCGATTCTCTCCACGACGTCGATTTACAGGTGAGGGATATCACTACTAACCCAGAATGGGAGAAAGCTTACAAGTACGAGATTCCCGTGCTCGCAAAAGTGCGCTCTGATGGCTCCGAGGAAGTACTTCCTCGGCTATCTCCTCGTCTGGGGGTGGAGTTTGTTCAGAAGAAACTGGCAGCTGCCCTACAGTAG

Protein sequence

MNTVPKFQSWGNQRAARMISATTALIGRPSSSSPLSLLLKAKTPRRILIPSASFSSSLPSRKLILYSKPGCCLCDGLKEKLQVAFLLAGPDSLHDVDLQVRDITTNPEWEKAYKYEIPVLAKVRSDGSEEVLPRLSPRLGVEFVQKKLAAALQ
Homology
BLAST of Bhi09G002235 vs. TAIR 10
Match: AT4G08280.1 (Thioredoxin superfamily protein )

HSP 1 Score: 156.0 bits (393), Expect = 2.4e-38
Identity = 82/116 (70.69%), Postives = 92/116 (79.31%), Query Frame = 0

Query: 38  LLKAKTPRRILIPSASFSSSLP-SRKLILYSKPGCCLCDGLKEKLQVAFLLA-GPDSLHD 97
           L+ A   R +    +S SSS P +RKL+LYSKPGCCLCDGLKEKL  AF L+ GPDSL+D
Sbjct: 9   LVFAARRRPLFCSLSSSSSSKPNTRKLVLYSKPGCCLCDGLKEKLHAAFTLSTGPDSLND 68

Query: 98  VDLQVRDITTNPEWEKAYKYEIPVLAKVRSDGSEEVLPRLSPRLGVEFVQKKLAAA 152
           V LQVRDITTNPEWE+AY+YEIPVLAK  SDG EEVLPRLSPRL  E +QKKL AA
Sbjct: 69  VTLQVRDITTNPEWERAYQYEIPVLAKENSDGKEEVLPRLSPRLSAELIQKKLLAA 124

BLAST of Bhi09G002235 vs. ExPASy TrEMBL
Match: A0A0A0L383 (Glutaredoxin-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G365550 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.8e-58
Identity = 122/136 (89.71%), Postives = 127/136 (93.38%), Query Frame = 0

Query: 18  MISATTALIGRPSSSSPLSLLLKAKTPRRILIPSASFSSSLPSRKLILYSKPGCCLCDGL 77
           MIS+T A IGRP SSSPLSLLLK +T RRIL PSASFSSSLPSRKLILYSKPGCCLCDGL
Sbjct: 1   MISSTAAKIGRP-SSSPLSLLLKPQTSRRILTPSASFSSSLPSRKLILYSKPGCCLCDGL 60

Query: 78  KEKLQVAFLLAGPDSLHDVDLQVRDITTNPEWEKAYKYEIPVLAKVRSDGSEEVLPRLSP 137
           KEKL  AFLL+GPDSLHDV LQVRDITTNPEWE+AY+YEIPVLAKVRSDGSEEVLPRLSP
Sbjct: 61  KEKLHAAFLLSGPDSLHDVHLQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPRLSP 120

Query: 138 RLGVEFVQKKLAAALQ 154
           RLGVEFVQKKLAAALQ
Sbjct: 121 RLGVEFVQKKLAAALQ 135

BLAST of Bhi09G002235 vs. ExPASy TrEMBL
Match: A0A1S3B973 (Glutaredoxin-like protein OS=Cucumis melo OX=3656 GN=LOC103487576 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 6.9e-57
Identity = 121/136 (88.97%), Postives = 124/136 (91.18%), Query Frame = 0

Query: 18  MISATTALIGRPSSSSPLSLLLKAKTPRRILIPSASFSSSLPSRKLILYSKPGCCLCDGL 77
           MIS T A IGRP SSSPLSLLLK  T R IL PSASFSSSLPSRKLILYSKPGCCLCDGL
Sbjct: 1   MISTTAARIGRP-SSSPLSLLLKPHTSRPILTPSASFSSSLPSRKLILYSKPGCCLCDGL 60

Query: 78  KEKLQVAFLLAGPDSLHDVDLQVRDITTNPEWEKAYKYEIPVLAKVRSDGSEEVLPRLSP 137
           KEKL  AFLL+GPDSLHDV LQVRDITTNPEWE+AY+YEIPVLAKVRSDGSEEVLPRLSP
Sbjct: 61  KEKLHAAFLLSGPDSLHDVHLQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPRLSP 120

Query: 138 RLGVEFVQKKLAAALQ 154
           RLGVEFVQKKLAAALQ
Sbjct: 121 RLGVEFVQKKLAAALQ 135

BLAST of Bhi09G002235 vs. ExPASy TrEMBL
Match: A0A6J1CHP7 (Glutaredoxin-like protein OS=Momordica charantia OX=3673 GN=LOC111011727 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 8.2e-50
Identity = 110/138 (79.71%), Postives = 117/138 (84.78%), Query Frame = 0

Query: 18  MISATTALIGRPSSSSPLSLLLKAKTPRRILIPSASFSSS--LPSRKLILYSKPGCCLCD 77
           MISAT   I RP+S     LL  A+  RRILIPSASFSSS   PSRKLILYSKPGCCLCD
Sbjct: 1   MISATATAIARPASR---VLLTTAQRTRRILIPSASFSSSSAAPSRKLILYSKPGCCLCD 60

Query: 78  GLKEKLQVAFLLAGPDSLHDVDLQVRDITTNPEWEKAYKYEIPVLAKVRSDGSEEVLPRL 137
           GLKEKLQ AFLLAGPDSLHDVDLQVRDIT+NPEWE+AY+YEIPVLAKV +DGSEE LPRL
Sbjct: 61  GLKEKLQAAFLLAGPDSLHDVDLQVRDITSNPEWERAYQYEIPVLAKVLADGSEEALPRL 120

Query: 138 SPRLGVEFVQKKLAAALQ 154
           SPRLGVE +QKKLAA LQ
Sbjct: 121 SPRLGVELIQKKLAAVLQ 135

BLAST of Bhi09G002235 vs. ExPASy TrEMBL
Match: A0A6J1ISY9 (Glutaredoxin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480330 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-49
Identity = 109/137 (79.56%), Postives = 120/137 (87.59%), Query Frame = 0

Query: 18  MISATTALIGRPSSSSPLSLLLKAKTPRRILIPSASF-SSSLPSRKLILYSKPGCCLCDG 77
           MISAT A++ RPSS    +LLL A+  RRIL P+ASF SSS+ SRKLI+YSKPGCCLCDG
Sbjct: 1   MISATVAIMSRPSS----TLLLAAQRGRRILTPAASFSSSSVSSRKLIMYSKPGCCLCDG 60

Query: 78  LKEKLQVAFLLAGPDSLHDVDLQVRDITTNPEWEKAYKYEIPVLAKVRSDGSEEVLPRLS 137
           LKEKLQ AFLLAGP+SLHDVDL VRDITTNPEWE+AY+YEIPVLAKV SDGSEE LPRLS
Sbjct: 61  LKEKLQAAFLLAGPNSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLS 120

Query: 138 PRLGVEFVQKKLAAALQ 154
           PRLGVE +QKKLAAALQ
Sbjct: 121 PRLGVELIQKKLAAALQ 133

BLAST of Bhi09G002235 vs. ExPASy TrEMBL
Match: A0A6J1FN20 (Glutaredoxin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445753 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.4e-49
Identity = 110/142 (77.46%), Postives = 119/142 (83.80%), Query Frame = 0

Query: 18  MISATTALIGRPSSSSPLSLLLKAKTPRRILIPSASF------SSSLPSRKLILYSKPGC 77
           MISAT A++ RPSS    +LLL A+  RRIL P+ASF      SSS+ SRKLILYSKPGC
Sbjct: 1   MISATVAIMSRPSS----TLLLAAQRGRRILTPAASFSSSSSSSSSVSSRKLILYSKPGC 60

Query: 78  CLCDGLKEKLQVAFLLAGPDSLHDVDLQVRDITTNPEWEKAYKYEIPVLAKVRSDGSEEV 137
           CLCDGLKEKLQ AFLLAGPDSLHDVDL VRDITTNPEWE+AY+YEIPVLAKV  DGSEE 
Sbjct: 61  CLCDGLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLPDGSEET 120

Query: 138 LPRLSPRLGVEFVQKKLAAALQ 154
           LPRLSPRLGVE +QKKLAAALQ
Sbjct: 121 LPRLSPRLGVELIQKKLAAALQ 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G08280.12.4e-3870.69Thioredoxin superfamily protein [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L3834.8e-5889.71Glutaredoxin-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G365550 PE=3 SV=1[more]
A0A1S3B9736.9e-5788.97Glutaredoxin-like protein OS=Cucumis melo OX=3656 GN=LOC103487576 PE=3 SV=1[more]
A0A6J1CHP78.2e-5079.71Glutaredoxin-like protein OS=Momordica charantia OX=3673 GN=LOC111011727 PE=3 SV... [more]
A0A6J1ISY91.1e-4979.56Glutaredoxin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480330 PE=3 SV=1[more]
A0A6J1FN202.4e-4977.46Glutaredoxin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445753 PE=3 SV=... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008554Glutaredoxin-likePFAMPF05768DUF836coord: 62..148
e-value: 5.6E-20
score: 71.5
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 55..143
e-value: 1.7E-16
score: 61.9
NoneNo IPR availablePANTHERPTHR33558GLUTAREDOXIN-LIKE PROTEIN C5ORF63 HOMOLOGcoord: 42..152
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 58..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M002235Bhi09M002235mRNA