Bhi09G002228 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G002228
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Transmembrane protein
Location	chr9: 71383531 .. 71386355 (-)
RNA-Seq Expression	Bhi09G002228
Synteny	Bhi09G002228

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAATTTCCCTCCCAACTCGCCATCGATGGGAAACAAAGGGGCCGGAGCCCTCAATACTCCACAGCAACCGATTCTAGGGCTCAGCATTCATAAAATCCACCGTCCCAGATCGTAATTCTGTAAATTCCTCGCCGGAGAAGCGTTACCCCCACCGTCAACCACTGTTTGGGTAATTGGGTGTGAGAAATTTTCTTATATTTTCTCCATTTTCCTTCTCTTTCTCGCTTCACTTCCTCTGTCTGCGATGAATTTAATTTTGATTGCTTCGGTCTTTCTGCAAACAGGACTGATTAGCTCGCATTTTGTTGTTAATTATGATTACTCATCAAATTTCATCATTGAGAATTTGATGACAATTAAGGTGATTCGAGTTGAGGAATGAGTGCAAACAGAAATGTAGGTTAATGGGTGGGTTTTAGAGCCGTCCCTCCTGATAATTTGTTGAGGATGGAAGTTTGACCTAGAACTGCTATTTTTCTTCGTTGATTTTTTTTAATGAAAAGATGGGACTGTGTTTCTTCTGAATCTGCACCATTGATGACTTCCATGGACAGCTCTTTCTGATGGTAAAACTGTTTCGAATACCCATTTTCTTGAAAACCCTTGAATTATTTCGAAGTTATGATAGTTTTTATCGTTCTTTCCATGGACAGCTCTTTCTAATGGTATACTTTTGATATTGAGATTGTTGAATGTTGTGTGCTGACACATAATTCTCTTTCTCAGATAATATTGGAGTAGAATTTTGCTGCTGTTTCTCATTAGTAATTGAGTTCGTTTAATCGAGGAACAGATATGGGAAGCCAAGAAAATGTTAAACATATTGAGGAGTGCTCAGTTTCAAAGTAAGCTCTCTCGAGCCTTTTCTGTTTCAAGTTTCACTTTCCCTTTTCTTTATATACTGCTATCATCTCTCTTTATATCTCTGATGGCTTTTCTCCTTTCCCAATTGTTGAAAACTGGACTGTATAATTGCAATTGAAAATTCCTCTAGAATTTTATCTTATAACACCATCTTGTTGTGCAAATCTGAAATTGCCTAGCATAAAATTTGGGCAGTTTTCTCCGAAACCCTAGGGGATATGTATATGTTGCTGCTGAATTTTAAGATAATCTCAACTTCCGCCAAATAGGGTATTCACTCCAAAAACTGATACTTTTACCTTATTCATCCTTGAATCCATTACTTGTTTGGTGGATCGAATTGATGCAGAAATTTTGTTCAAAATGTTGTGTTGAATGTCTTGACTCTGGTATAAGGCTATAGCCATGGTTTAAATTTTGGTAAATATCAACTTAGTAGCTATTCTTAGGCGGTTTGGCTAAGATGACAGAAAGAATCTTAAAAAGTTTTACCGTTTGTGATCTAATCTATATCATTTTATTACGGTAACATTTTCTTTTTTTGTTTAAATACTAGGTTGGTCTGGTAGTTCGGTTCATTTTGATTCATATACTTTTAAAATGTTTATTAGTCTCTATACTCTCCAGATGTCTATTTTGATGTCTATACTTTAAAAAAAGTGATCTATCTTGTTCCCTTTATTTTCATATCTATCTCATTTTTATCTATCTCATTTTAGCATGACACCTCATTATTAAAAATTCTCATTGGGTATAAAACTTATGCTAAACTTTGCAAATAGGGATTAGAATGACCATTTTTTAAAGTATAGGACCAAAATAAACATTTTGAAAGAAAAAATACTTGAATTCATCCTAAGCTACATATATATGCACCCCATCCATTTGTCCAATCATAATTTACTTGGAAAACTCTTCTTACTTTTTTTTTTTTTCAAAATATTTTTGGTTTCTTTCGTGTGTGTGATTAATGTGGGATGCACCAAGATTAGTGCATTTTAGGTTGCACCTGTGTATTGCTCTTTTGAAAGTATATTGACTAAAATATTTTTTGTTTCTTTTGTGTGATTAAAGTGGAAAGCACAAAGATGGATGATTTTGGGATACTCATGTTAATGTATTGATTGCTCTTTTGAAAGTACATTAACTAAAATGATCCAAAACAAAAAATACAAGGATAAAAATTGGAAATTTTAGAAGTATAAGAATACAATGAACCAAAATCAAAATACGCAGACCAAAGTAGTATTTAAATTTCTTTTTCTCCTTCTCTTTCAACTGGAATTATTCCTGAGATTTTATTGATGATCGTTGGATATTCACAGTGCATTGGGCACTTGGGTATTCTCAGTAGCAGGAGCATTGCTAGCAATTCCAGTGGGAATAAAGAGGAAATCGCTTGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTGGACATTATAATGGGAATTAGTGCCTGTGAAAGAGAACATGCCGAGCGTCAAATGAAGCTATTAGAAGAAGCTCAAAACTCTGCAGCCGAAGCCTCTCTTAACGATTCCGAATCCCATTCTTGATATCATCCTTACATGGTTGTACCACTCGCTCGTGTCGTGCCTAACGCCCTTTTCTTCCTCAGCTGTGTTAGATGGCATGGCCCTTGGCTGAGTTTGTTCAGCCTTCTTTCAAACCACAATGACATTGCATGAGTTATGGCTTCACGAAATCAACTGCCTTGACTTTATGCATTTGCAATAAAATTGTACTTGTTACCAAAATACAAATTCTTATGTGCATTTAGCTTTTCTATATGACTTTGAGAATATGGTTTCTTTATTCCCTTGAAGAACTCACAGTTTCAGAAGTAAATAGGTGGAAATTCTGATGAATATTTATGTTCACTGCCCTCTCCTTCACTTCAATGTAGACAATTTGAATTCTA

mRNA sequence

CCCAAATTTCCCTCCCAACTCGCCATCGATGGGAAACAAAGGGGCCGGAGCCCTCAATACTCCACAGCAACCGATTCTAGGGCTCAGCATTCATAAAATCCACCGTCCCAGATCGTAATTCTGTAAATTCCTCGCCGGAGAAGCGTTACCCCCACCGTCAACCACTGTTTGGGTAATTGGGTATAATATTGGAGTAGAATTTTGCTGCTGTTTCTCATTAGTAATTGAGTTCGTTTAATCGAGGAACAGATATGGGAAGCCAAGAAAATGTTAAACATATTGAGGAGTGCTCAGTTTCAAATGCATTGGGCACTTGGGTATTCTCAGTAGCAGGAGCATTGCTAGCAATTCCAGTGGGAATAAAGAGGAAATCGCTTGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTGGACATTATAATGGGAATTAGTGCCTGTGAAAGAGAACATGCCGAGCGTCAAATGAAGCTATTAGAAGAAGCTCAAAACTCTGCAGCCGAAGCCTCTCTTAACGATTCCGAATCCCATTCTTGATATCATCCTTACATGGTTGTACCACTCGCTCGTGTCGTGCCTAACGCCCTTTTCTTCCTCAGCTGTGTTAGATGGCATGGCCCTTGGCTGAGTTTGTTCAGCCTTCTTTCAAACCACAATGACATTGCATGAGTTATGGCTTCACGAAATCAACTGCCTTGACTTTATGCATTTGCAATAAAATTGTACTTGTTACCAAAATACAAATTCTTATGTGCATTTAGCTTTTCTATATGACTTTGAGAATATGGTTTCTTTATTCCCTTGAAGAACTCACAGTTTCAGAAGTAAATAGGTGGAAATTCTGATGAATATTTATGTTCACTGCCCTCTCCTTCACTTCAATGTAGACAATTTGAATTCTA

Coding sequence (CDS)

ATGGGAAGCCAAGAAAATGTTAAACATATTGAGGAGTGCTCAGTTTCAAATGCATTGGGCACTTGGGTATTCTCAGTAGCAGGAGCATTGCTAGCAATTCCAGTGGGAATAAAGAGGAAATCGCTTGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTGGACATTATAATGGGAATTAGTGCCTGTGAAAGAGAACATGCCGAGCGTCAAATGAAGCTATTAGAAGAAGCTCAAAACTCTGCAGCCGAAGCCTCTCTTAACGATTCCGAATCCCATTCTTGA

Protein sequence

MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAAEASLNDSESHS

Homology

[Close]

BLAST of Bhi09G002228 vs. TAIR 10
Match: AT1G21930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3); Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 145.6 bits (366), Expect = 2.0e-35
Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 0


Query: 1  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQENVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1  MGSQENVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 61 ISACEREHAERQMKLLEEAQNSAAEASLNDSESHS 96
          +S CEREHAE QMKLL+++QN+    +  ++E  S
Sbjct: 61 VSQCEREHAEHQMKLLQDSQNATTTTTNTETEESS 95

[Close]

BLAST of Bhi09G002228 vs. TAIR 10
Match: AT3G42150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 3.0e-34
Identity = 68/93 (73.12%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQ+NVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1  MGSQKNVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 61 ISACEREHAERQMKLLEEAQNSAAEASLNDSES 94
          +S CEREHAE Q KLL+++QN+    +  ++E+
Sbjct: 61 VSQCEREHAEHQTKLLQDSQNATTTTTTTNTET 93

[Close]

BLAST of Bhi09G002228 vs. TAIR 10
Match: AT3G42150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 42 Blast hits to 42 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 3.0e-34
Identity = 68/93 (73.12%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQ+NVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1  MGSQKNVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 61 ISACEREHAERQMKLLEEAQNSAAEASLNDSES 94
          +S CEREHAE Q KLL+++QN+    +  ++E+
Sbjct: 61 VSQCEREHAEHQTKLLQDSQNATTTTTTTNTET 93

[Close]

BLAST of Bhi09G002228 vs. TAIR 10
Match: AT3G42150.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 3.0e-34
Identity = 68/93 (73.12%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQ+NVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1  MGSQKNVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 61 ISACEREHAERQMKLLEEAQNSAAEASLNDSES 94
          +S CEREHAE Q KLL+++QN+    +  ++E+
Sbjct: 61 VSQCEREHAEHQTKLLQDSQNATTTTTTTNTET 93

[Close]

BLAST of Bhi09G002228 vs. ExPASy TrEMBL
Match: A0A1S3B9M1 (uncharacterized protein LOC103487570 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487570 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.4e-41
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQENVKHIE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSQENVKHIEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEEAQNSAAEASLNDSESHS 96
          ISACEREHAERQMKLLEEAQNSA ++SLNDS SHS
Sbjct: 61 ISACEREHAERQMKLLEEAQNSAPQSSLNDSNSHS 95

[Close]

BLAST of Bhi09G002228 vs. ExPASy TrEMBL
Match: A0A0A0L1X1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G371820 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.2e-40
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQENVKHIE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSQENVKHIEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEEAQNSAAEASLNDSESHS 96
          ISACEREHAERQMKLLEEAQNSA EA LNDS S S
Sbjct: 61 ISACEREHAERQMKLLEEAQNSATEAFLNDSNSDS 95

[Close]

BLAST of Bhi09G002228 vs. ExPASy TrEMBL
Match: A0A6J1C9Z5 (uncharacterized protein LOC111009737 OS=Momordica charantia OX=3673 GN=LOC111009737 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.0e-39
Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGS ENVKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSHENVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEEAQNSAAEASLNDSESHS 96
          ISACEREHAERQMKLL EAQNSAA+AS+ DSESHS
Sbjct: 61 ISACEREHAERQMKLL-EAQNSAADASVADSESHS 94

[Close]

BLAST of Bhi09G002228 vs. ExPASy TrEMBL
Match: A0A6J1FMK1 (uncharacterized protein LOC111446769 OS=Cucurbita moschata OX=3662 GN=LOC111446769 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-38
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQE VKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEEAQNSAAEASLNDSESHS 96
          ISACEREHAERQMKLLEEAQNSA E S+ +S SHS
Sbjct: 61 ISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS 95

[Close]

BLAST of Bhi09G002228 vs. ExPASy TrEMBL
Match: A0A6J1FFR1 (uncharacterized protein LOC111443534 OS=Cucurbita moschata OX=3662 GN=LOC111443534 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.4e-38
Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQE VKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEEAQNSAAEASLNDSESHS 96
          ISACEREHAERQMKLL EAQNSAAEAS+N+SES S
Sbjct: 61 ISACEREHAERQMKLL-EAQNSAAEASVNESESLS 94

The following BLAST results are available for this feature:

BLAST of Bhi09G002228 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21930.1	2.0e-35	74.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G42150.2	3.0e-34	73.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G42150.1	3.0e-34	73.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G42150.3	3.0e-34	73.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

BLAST of Bhi09G002228 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi09G002228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9M1	7.4e-41	94.74	uncharacterized protein LOC103487570 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L1X1	6.2e-40	94.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G371820 PE=4 SV=1	[more]
A0A6J1C9Z5	9.0e-39	93.68	uncharacterized protein LOC111009737 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1FMK1	1.2e-38	91.58	uncharacterized protein LOC111446769 OS=Cucurbita moschata OX=3662 GN=LOC1114467...	[more]
A0A6J1FFR1	3.4e-38	93.68	uncharacterized protein LOC111443534 OS=Cucurbita moschata OX=3662 GN=LOC1114435...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 66..89
None	No IPR available	PANTHER	PTHR35691	EXPRESSED PROTEIN	coord: 1..91
None	No IPR available	PANTHER	PTHR35691:SF1	EXPRESSED PROTEIN	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M002228	Bhi09M002228	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane