Bhi09G002120 (gene) Wax gourd (B227) v1

Overview
NameBhi09G002120
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionGag-pro-like protein
Locationchr9: 67949889 .. 67950097 (-)
RNA-Seq ExpressionBhi09G002120
SyntenyBhi09G002120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAGAATGCATATACCTAAGTTGGCCAGGGGAATTACTTTTCAACGATAAGCAGTCAAGGGAATACACCAAGGGATTTGAGACCTCAATTGCTGTTATCTCTGAAAACACTCATTCATCTTGTGAATTGGTTTACCATTGTCCGCTAGAACTTGAGTTAAACAATTGGGAGATCAAGAAGATGTTAAGTGTCATTAAAGGATCGCCAAA

mRNA sequence

GTAGAATGCATATACCTAAGTTGGCCAGGGGAATTACTTTTCAACGATAAGCAGTCAAGGGAATACACCAAGGGATTTGAGACCTCAATTGCTGTTATCTCTGAAAACACTCATTCATCTTGTGAATTGGTTTACCATTGTCCGCTAGAACTTGAGTTAAACAATTGGGAGATCAAGAAGATGTTAAGTGTCATTAAAGGATCGCCAAA

Coding sequence (CDS)

GTAGAATGCATATACCTAAGTTGGCCAGGGGAATTACTTTTCAACGATAAGCAGTCAAGGGAATACACCAAGGGATTTGAGACCTCAATTGCTGTTATCTCTGAAAACACTCATTCATCTTGTGAATTGGTTTACCATTGTCCGCTAGAACTTGAGTTAAACAATTGGGAGATCAAGAAGATGTTAAGTGTCATTAAAGGATCGCCAAA

Protein sequence

VECIYLSWPGELLFNDKQSREYTKGFETSIAVISENTHSSCELVYHCPLELELNNWEIKKMLSVIKGSP
Homology
[Close]
BLAST of Bhi09G002120 vs. ExPASy TrEMBL
Match: A0A5A7TI68 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00990 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.7e-08
Identity = 34/60 (56.67%), Postives = 39/60 (65.00%), Query Frame = 0 

Query: 9   PGELLFNDKQSREYTKGFETSIAVISENTHSSCELVYHCPLELELNNWEIKKMLSVIKGS 68
           P ELLF+  Q +   +  E SIAV+SENT  S  LV+ CP   ELNNWEIKK L V KGS
Sbjct: 450 PEELLFDTNQRKRRNEDSEISIAVVSENTSLSHPLVHQCPPGFELNNWEIKKTLEVTKGS 509

[Close]
BLAST of Bhi09G002120 vs. ExPASy TrEMBL
Match: A0A5D3C1I2 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G003070 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.7e-08
Identity = 34/59 (57.63%), Postives = 38/59 (64.41%), Query Frame = 0 

Query: 9   PGELLFNDKQSREYTKGFETSIAVISENTHSSCELVYHCPLELELNNWEIKKMLSVIKG 68
           P ELLF+  Q +   K  E SIAV+SENT     LV+ CP E ELNNWEIKK L V KG
Sbjct: 512 PRELLFDTNQRKRRNKDSEISIAVVSENTILPHPLVHQCPPEFELNNWEIKKTLEVTKG 570

[Close]
BLAST of Bhi09G002120 vs. ExPASy TrEMBL
Match: A0A5A7TZF3 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001550 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.6e-08
Identity = 33/59 (55.93%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 10 GELLFNDKQSREYTKGFETSIAVISENTHSSCELVYHCPLELELNNWEIKKMLSVIKGS 69
          GELLF+  Q + + +  E SIAV+SENT     LV+ CP   ELNNWEIKK L V KGS
Sbjct: 22 GELLFDTHQRKRHNEDSEISIAVVSENTSPPHPLVHKCPPGFELNNWEIKKTLKVTKGS 80

[Close]
BLAST of Bhi09G002120 vs. ExPASy TrEMBL
Match: A0A5A7TW53 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00640 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-07
Identity = 33/60 (55.00%), Postives = 38/60 (63.33%), Query Frame = 0 

Query: 9   PGELLFNDKQSREYTKGFETSIAVISENTHSSCELVYHCPLELELNNWEIKKMLSVIKGS 68
           P ELLF+  Q +   +  E SIAV+SENT     LV+ CP   ELNNWEIKK L V KGS
Sbjct: 427 PRELLFDTNQRKRRNEDSEISIAVVSENTIPPYPLVHQCPPGFELNNWEIKKTLEVTKGS 486

[Close]
BLAST of Bhi09G002120 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.3e-07
Identity = 32/59 (54.24%), Postives = 38/59 (64.41%), Query Frame = 0 

Query: 10   GELLFNDKQSREYTKGFETSIAVISENTHSSCELVYHCPLELELNNWEIKKMLSVIKGS 69
            GELLF+  Q + + +  E SI V+SENT     LV+ CP   ELNNWEIKK L V KGS
Sbjct: 1048 GELLFDTHQRKRHNEDSEISIEVVSENTSLPHPLVHKCPPGFELNNWEIKKTLKVTKGS 1106

The following BLAST results are available for this feature:
BLAST of Bhi09G002120 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi09G002120 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi09G002120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TI682.7e-0856.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C1I22.7e-0857.63Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G... [more]
A0A5A7TZF34.6e-0855.93Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G00155... [more]
A0A5A7TW531.0e-0755.00Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280... [more]
A0A5A7VAU52.3e-0754.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M002120Bhi09M002120mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
molecular_function GO:0140640 catalytic activity, acting on a nucleic acid