Bhi09G001786 (gene) Wax gourd (B227) v1

Overview
NameBhi09G001786
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionGibberellin regulated protein
Locationchr9: 59471263 .. 59472200 (+)
RNA-Seq ExpressionBhi09G001786
SyntenyBhi09G001786
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATTCGTTTCTCATTTATATTCATTCTATACGTCCTCAACATTTTGAATTCCATTCTCTCTCTCAAATCTTATCTTAATTTCTCTCCTCCTAATTCCATGGTGATTTCTAAACCTTTAATTATTGCTTATCTTTTCATATCGTCCTTTCTCGTTCATACGTTGGTTGAAGCTAATAAAATGGTAAATTTTAATATCAGTCTCAATTAAACATGTTTTTTATCGTTCGAAATTATTCTTAGATTCACTTTGGATTTCAGGTGAACTCAATCGATGGTGTTGCGACTAATACGGCTAAGATTCAAAATATTGGTAAATTAATATTATTTGGCTCATTTTTTTTAACTTGATATCTTTTTAGTATTTGATAAATATATAATTGTGAAATTGTGAAATCATATATTCAATGTTTTCAGATTGTGGAGGAGCTTGTGCATCGAGGTGCAAATTATCATCAAGGCCCAACCTGTGCAAGAGGGCATGTGGCACGTGCTGTGCACGTTGTAGCTGCGTGCCGCCGGGCACTTCCGGCGGCTATGATGCCTGCCCTTGCTACGCCAGCATGACCACTCACGGCGGCCGCCGAAAGTGTCCTTAAATTATTTAATTATTCAAGAAGTTACTGTTACGAAATATCCGTCACAATTTCTTCATGCAAAGTCTGTTCTATTATGTTCATTGTCATCTTCAAGCTTTTCCAGCTTTGATTAATAAATAAAATTTTCAAAGAGTGTTTAATGTAAGAAATTAATCTAAAATAAAAGTTATATATAGGAGAAAAACCAGATTTTTCTCTCTTATTTGTTAGCTTTTCCCTATTATGTGAGTGAATATACAACAGATGTGAATTATATTTTTGTACGTTAGAAGTGCTCATTTTTTTTTTATCGTGTAATAACGCTACAATTAATGGATCAAAACCTTTTTGAAACGAC

mRNA sequence

ATGGACATTCGTTTCTCATTTATATTCATTCTATACGTCCTCAACATTTTGAATTCCATTCTCTCTCTCAAATCTTATCTTAATTTCTCTCCTCCTAATTCCATGGTGATTTCTAAACCTTTAATTATTGCTTATCTTTTCATATCGTCCTTTCTCGTTCATACGTTGGTTGAAGCTAATAAAATGGTGAACTCAATCGATGGTGTTGCGACTAATACGGCTAAGATTCAAAATATTGATTGTGGAGGAGCTTGTGCATCGAGGTGCAAATTATCATCAAGGCCCAACCTGTGCAAGAGGGCATGTGGCACGTGCTGTGCACGTTGTAGCTGCGTGCCGCCGGGCACTTCCGGCGGCTATGATGCCTGCCCTTGCTACGCCAGCATGACCACTCACGGCGGCCGCCGAAAGTGTCCTTAAATTATTTAATTATTCAAGAAGTTACTGTTACGAAATATCCGTCACAATTTCTTCATGCAAAGTCTGTTCTATTATGTTCATTGTCATCTTCAAGCTTTTCCAGCTTTGATTAATAAATAAAATTTTCAAAGAGTGTTTAATGTAAGAAATTAATCTAAAATAAAAGTTATATATAGGAGAAAAACCAGATTTTTCTCTCTTATTTGTTAGCTTTTCCCTATTATGTGAGTGAATATACAACAGATGTGAATTATATTTTTGTACGTTAGAAGTGCTCATTTTTTTTTTATCGTGTAATAACGCTACAATTAATGGATCAAAACCTTTTTGAAACGAC

Coding sequence (CDS)

ATGGACATTCGTTTCTCATTTATATTCATTCTATACGTCCTCAACATTTTGAATTCCATTCTCTCTCTCAAATCTTATCTTAATTTCTCTCCTCCTAATTCCATGGTGATTTCTAAACCTTTAATTATTGCTTATCTTTTCATATCGTCCTTTCTCGTTCATACGTTGGTTGAAGCTAATAAAATGGTGAACTCAATCGATGGTGTTGCGACTAATACGGCTAAGATTCAAAATATTGATTGTGGAGGAGCTTGTGCATCGAGGTGCAAATTATCATCAAGGCCCAACCTGTGCAAGAGGGCATGTGGCACGTGCTGTGCACGTTGTAGCTGCGTGCCGCCGGGCACTTCCGGCGGCTATGATGCCTGCCCTTGCTACGCCAGCATGACCACTCACGGCGGCCGCCGAAAGTGTCCTTAA

Protein sequence

MDIRFSFIFILYVLNILNSILSLKSYLNFSPPNSMVISKPLIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP
Homology
BLAST of Bhi09G001786 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 117.9 bits (294), Expect = 6.7e-27
Identity = 62/105 (59.05%), Postives = 72/105 (68.57%), Query Frame = 0

Query: 35  MVISKPLIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSR 94
           M ISK LI + L   S LV  LV+A++     +G A      + IDCG AC +RC+LS R
Sbjct: 1   MAISKALIASLLI--SLLVLQLVQADENSQKKNGYA------KKIDCGSACVARCRLSRR 60

Query: 95  PNLCKRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 140
           P LC RACGTCC RC+CVPPGT G YD C CYAS+TTHGGRRKCP
Sbjct: 61  PRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 97

BLAST of Bhi09G001786 vs. TAIR 10
Match: AT1G75750.1 (GAST1 protein homolog 1 )

HSP 1 Score: 115.5 bits (288), Expect = 3.3e-26
Identity = 60/105 (57.14%), Postives = 70/105 (66.67%), Query Frame = 0

Query: 35  MVISKPLIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSR 94
           M ISK LI + L   S LV  LV+A+     ++         + IDCG AC +RC+LS R
Sbjct: 1   MAISKALIASLLI--SLLVLQLVQAD-----VENSQKKNGYAKKIDCGSACVARCRLSRR 60

Query: 95  PNLCKRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 140
           P LC RACGTCC RC+CVPPGT G YD C CYAS+TTHGGRRKCP
Sbjct: 61  PRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

BLAST of Bhi09G001786 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein )

HSP 1 Score: 110.9 bits (276), Expect = 8.2e-25
Identity = 60/99 (60.61%), Postives = 66/99 (66.67%), Query Frame = 0

Query: 41  LIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSRPNLCKR 100
           +++A L I S LV   V A       D V +N A    IDC   C  RC LSSRPNLC R
Sbjct: 6   VLLASLLI-SLLVLDFVHA-------DMVTSNDA--PKIDCNSRCQERCSLSSRPNLCHR 65

Query: 101 ACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 140
           ACGTCCARC+CV PGTSG YD CPCY S+TTHGGRRKCP
Sbjct: 66  ACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

BLAST of Bhi09G001786 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 )

HSP 1 Score: 100.9 bits (250), Expect = 8.5e-22
Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 0

Query: 76  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGR 135
           +  IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYAS+TT GGR
Sbjct: 36  VVKIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGR 95

Query: 136 RKCP 140
            KCP
Sbjct: 96  LKCP 99

BLAST of Bhi09G001786 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21
Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 0

Query: 63  VNSIDGVATNTAKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDA 122
           V++ DG       ++ IDCGG C  RC  SSR  LC RAC +CC+RC+CVPPGTSG    
Sbjct: 24  VHAADGAKVGEGVVK-IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHL 83

Query: 123 CPCYASMTTHGGRRKCP 140
           CPCYAS+TTHGGR KCP
Sbjct: 84  CPCYASITTHGGRLKCP 99

BLAST of Bhi09G001786 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-25
Identity = 58/105 (55.24%), Postives = 72/105 (68.57%), Query Frame = 0

Query: 35  MVISKPLIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSR 94
           M ISK L  A L +S  L+  +        + + ++      + IDCGGACA+RC+LSSR
Sbjct: 1   MAISKAL-FASLLLSLLLLEQVQSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRLSSR 60

Query: 95  PNLCKRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 140
           P LC RACGTCCARC+CVPPGTSG  + CPCYAS+TTHG +RKCP
Sbjct: 61  PRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

BLAST of Bhi09G001786 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 4.7e-25
Identity = 60/105 (57.14%), Postives = 70/105 (66.67%), Query Frame = 0

Query: 35  MVISKPLIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSR 94
           M ISK LI + L   S LV  LV+A+     ++         + IDCG AC +RC+LS R
Sbjct: 1   MAISKALIASLLI--SLLVLQLVQAD-----VENSQKKNGYAKKIDCGSACVARCRLSRR 60

Query: 95  PNLCKRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 140
           P LC RACGTCC RC+CVPPGT G YD C CYAS+TTHGGRRKCP
Sbjct: 61  PRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

BLAST of Bhi09G001786 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-23
Identity = 60/99 (60.61%), Postives = 66/99 (66.67%), Query Frame = 0

Query: 41  LIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSRPNLCKR 100
           +++A L I S LV   V A       D V +N A    IDC   C  RC LSSRPNLC R
Sbjct: 6   VLLASLLI-SLLVLDFVHA-------DMVTSNDA--PKIDCNSRCQERCSLSSRPNLCHR 65

Query: 101 ACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 140
           ACGTCCARC+CV PGTSG YD CPCY S+TTHGGRRKCP
Sbjct: 66  ACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

BLAST of Bhi09G001786 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-20
Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 0

Query: 76  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGR 135
           +  IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYAS+TT GGR
Sbjct: 36  VVKIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGR 95

Query: 136 RKCP 140
            KCP
Sbjct: 96  LKCP 99

BLAST of Bhi09G001786 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20
Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 0

Query: 63  VNSIDGVATNTAKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDA 122
           V++ DG       ++ IDCGG C  RC  SSR  LC RAC +CC+RC+CVPPGTSG    
Sbjct: 24  VHAADGAKVGEGVVK-IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHL 83

Query: 123 CPCYASMTTHGGRRKCP 140
           CPCYAS+TTHGGR KCP
Sbjct: 84  CPCYASITTHGGRLKCP 99

BLAST of Bhi09G001786 vs. ExPASy TrEMBL
Match: A0A6J1FJ01 (gibberellin-regulated protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445908 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-34
Identity = 77/103 (74.76%), Postives = 86/103 (83.50%), Query Frame = 0

Query: 37  ISKPLIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSRPN 96
           +SK L+   L   S LV  LV A++ VNSI GVA + A IQ+IDCGGACASRCKLSSRPN
Sbjct: 6   LSKALVTCVLM--SLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPN 65

Query: 97  LCKRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 140
           LCKRACGTCCARC+CVPPGTSGGY+ CPCYAS+TTHGGRRKCP
Sbjct: 66  LCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP 106

BLAST of Bhi09G001786 vs. ExPASy TrEMBL
Match: A0A6J1J2A8 (gibberellin-regulated protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481179 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.4e-34
Identity = 76/103 (73.79%), Postives = 86/103 (83.50%), Query Frame = 0

Query: 37  ISKPLIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSRPN 96
           +SK L+   L   S LV  LV A++ VNSI GVA + A +Q+IDCGGACASRCKLSSRP+
Sbjct: 6   LSKALVTCVLM--SLLVVHLVGADEKVNSIHGVAAHPANMQSIDCGGACASRCKLSSRPH 65

Query: 97  LCKRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 140
           LCKRACGTCCARC+CVPPGTSGGY+ CPCYASMTTHGGRRKCP
Sbjct: 66  LCKRACGTCCARCNCVPPGTSGGYETCPCYASMTTHGGRRKCP 106

BLAST of Bhi09G001786 vs. ExPASy TrEMBL
Match: A0A0A0LDK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872170 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.5e-31
Identity = 73/101 (72.28%), Postives = 81/101 (80.20%), Query Frame = 0

Query: 40  PLIIAYLFISSFLVHTLVEANKMVNSIDGVATNT-AKIQNIDCGGACASRCKLSSRPNLC 99
           P II  L  SS LV   VEA+  +  + GVA ++  K QNIDCGGACASRCKLSSRPNLC
Sbjct: 4   PKIIVCLLASSLLVLCFVEADDQM--VVGVAASSPTKTQNIDCGGACASRCKLSSRPNLC 63

Query: 100 KRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 140
            RACGTCCARCSCVPPGTSG Y+ACPCYA++TTHGGRRKCP
Sbjct: 64  HRACGTCCARCSCVPPGTSGNYEACPCYATLTTHGGRRKCP 102

BLAST of Bhi09G001786 vs. ExPASy TrEMBL
Match: A0A6J1CCE1 (gibberellin-regulated protein 11-like OS=Momordica charantia OX=3673 GN=LOC111010205 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.9e-31
Identity = 74/104 (71.15%), Postives = 79/104 (75.96%), Query Frame = 0

Query: 36  VISKPLIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSRP 95
           V+SKPLI       S LV   V A++ VN   G   +  KIQNIDCGGACA RCKLSSRP
Sbjct: 5   VLSKPLITCVFM--SLLVLCFVGAHEKVN---GTTADPTKIQNIDCGGACAMRCKLSSRP 64

Query: 96  NLCKRACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 140
           NLCKRACGTCCARCSCVPPGTSGGYDACPCYA +TT GGR KCP
Sbjct: 65  NLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP 103

BLAST of Bhi09G001786 vs. ExPASy TrEMBL
Match: A0A5D3E7E4 (Gibberellin-regulated protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008070 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.0e-30
Identity = 73/100 (73.00%), Postives = 77/100 (77.00%), Query Frame = 0

Query: 40  PLIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSRPNLCK 99
           P II  L   S LV   VEA+ MV    GVA +    QNI+CGGACASRCKLSSRPNLCK
Sbjct: 4   PKIIPCLVAMSLLVLCFVEADDMV---VGVAASPTLTQNINCGGACASRCKLSSRPNLCK 63

Query: 100 RACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 140
           RACGTCCARCSCVPPGTSG Y ACPCYA +TTHGGRRKCP
Sbjct: 64  RACGTCCARCSCVPPGTSGNYGACPCYAKLTTHGGRRKCP 100

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G75750.26.7e-2759.05GAST1 protein homolog 1 [more]
AT1G75750.13.3e-2657.14GAST1 protein homolog 1 [more]
AT2G18420.18.2e-2560.61Gibberellin-regulated family protein [more]
AT4G09600.18.5e-2267.19GAST1 protein homolog 3 [more]
AT4G09610.11.1e-2159.74GAST1 protein homolog 2 [more]
Match NameE-valueIdentityDescription
Q93X171.2e-2555.24Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1[more]
P466894.7e-2557.14Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV... [more]
F4IQJ41.2e-2360.61Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ... [more]
P466871.2e-2067.19Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV... [more]
P466881.6e-2059.74Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV... [more]
Match NameE-valueIdentityDescription
A0A6J1FJ011.2e-3474.76gibberellin-regulated protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114459... [more]
A0A6J1J2A84.4e-3473.79gibberellin-regulated protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481179... [more]
A0A0A0LDK84.5e-3172.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872170 PE=3 SV=1[more]
A0A6J1CCE15.9e-3171.15gibberellin-regulated protein 11-like OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A5D3E7E41.0e-3073.00Gibberellin-regulated protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003854Gibberellin regulated proteinPFAMPF02704GASAcoord: 80..139
e-value: 9.7E-21
score: 73.7
NoneNo IPR availablePANTHERPTHR23201:SF67SNAKIN-2-LIKEcoord: 36..139
NoneNo IPR availablePANTHERPTHR23201EXTENSIN, PROLINE-RICH PROTEINcoord: 36..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001786Bhi09M001786mRNA