Bhi09G001205 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G001205
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Dehydrin
Location	chr9: 37216318 .. 37216530 (+)
RNA-Seq Expression	Bhi09G001205
Synteny	Bhi09G001205

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCAGTCGAAAGATGACGGTCATGGAGGGAGGAGGAGGAAGAAGGGGCTGAAGGAGAAGGTAAAGGAAAAGATGCCAGGACATCATCATGAGCCCCAGGCAGTGTCAACCACAACGCCGAGCGGTTATTCGTCGGCCCAGTATGGTGGGCAGTATGAGAAGAAGGGAATAATGGAGAAGATCAAGGAGAAACTGTCGGGACATCACTAA

mRNA sequence

ATGTGTCAGTCGAAAGATGACGGTCATGGAGGGAGGAGGAGGAAGAAGGGGCTGAAGGAGAAGGTAAAGGAAAAGATGCCAGGACATCATCATGAGCCCCAGGCAGTGTCAACCACAACGCCGAGCGGTTATTCGTCGGCCCAGTATGGTGGGCAGTATGAGAAGAAGGGAATAATGGAGAAGATCAAGGAGAAACTGTCGGGACATCACTAA

Coding sequence (CDS)

ATGTGTCAGTCGAAAGATGACGGTCATGGAGGGAGGAGGAGGAAGAAGGGGCTGAAGGAGAAGGTAAAGGAAAAGATGCCAGGACATCATCATGAGCCCCAGGCAGTGTCAACCACAACGCCGAGCGGTTATTCGTCGGCCCAGTATGGTGGGCAGTATGAGAAGAAGGGAATAATGGAGAAGATCAAGGAGAAACTGTCGGGACATCACTAA

Protein sequence

MCQSKDDGHGGRRRKKGLKEKVKEKMPGHHHEPQAVSTTTPSGYSSAQYGGQYEKKGIMEKIKEKLSGHH

Homology

[Close]

BLAST of Bhi09G001205 vs. TAIR 10
Match: AT5G66400.1 (Dehydrin family protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKMPGHHHEPQAVSTT--TPSGYSSAQYGGQ-YEKKGIME 63
           S+DDG GG RRKKG+ +K+KEK+PGHH +           SGY +  YGG+ +EKKG+M+
Sbjct: 117 SEDDGQGG-RRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGMMD 176

Query: 64  KIKEKLSG 69
           KIKEKL G
Sbjct: 177 KIKEKLPG 183

[Close]

BLAST of Bhi09G001205 vs. TAIR 10
Match: AT5G66400.2 (Dehydrin family protein )

HSP 1 Score: 65.9 bits (159), Expect = 1.5e-11
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKMPGHHHEPQAVSTT--TPSGYSSAQYGGQ-YEKKGIME 63
           S DDG GG RRKKG+ +K+KEK+PGHH +           SGY +  YGG+ +EKKG+M+
Sbjct: 116 SSDDGQGG-RRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGMMD 175

Query: 64  KIKEKLSG 69
           KIKEKL G
Sbjct: 176 KIKEKLPG 182

[Close]

BLAST of Bhi09G001205 vs. TAIR 10
Match: AT3G50980.1 (dehydrin xero 1 )

HSP 1 Score: 63.5 bits (153), Expect = 7.5e-11
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 4   SKDDGHGGRRR-KKGLKEKVKEKMPGHHHEPQAVST-TTPSGYSSAQYGGQYEKKGIMEK 63
           S+DDG GGRRR KKG+ EK+KEK+PGHH   +  S  +T + Y +      +EKKG+MEK
Sbjct: 61  SEDDGLGGRRRKKKGITEKIKEKLPGHHDSNKTSSLGSTTTAYDTGTV--HHEKKGMMEK 120

Query: 64  IKEKLSGHH 71
           IKEKL G H
Sbjct: 121 IKEKLPGGH 127

[Close]

BLAST of Bhi09G001205 vs. TAIR 10
Match: AT2G21490.1 (dehydrin LEA )

HSP 1 Score: 60.8 bits (146), Expect = 4.9e-10
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKM-PGHHHEPQAVSTTTPSGYSSAQYGGQYEKKGIMEKI 63
           S+DDG GG RRKK +KEK+KEK   G H + Q  +T T +G ++      +EKKGI+EKI
Sbjct: 116 SEDDGQGG-RRKKSIKEKIKEKFGSGKHKDEQTPATATTTGPATTDQ--PHEKKGILEKI 175

Query: 64  KEKLSGHH 71
           K+KL GHH
Sbjct: 176 KDKLPGHH 180

[Close]

BLAST of Bhi09G001205 vs. TAIR 10
Match: AT1G20440.1 (cold-regulated 47 )

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-08
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 11  GRRRKKGLKEKVKEKMPGHH----HEPQAVSTTTPSGYSSAQYGGQY---EKKGIMEKIK 70
           G   KKGL EK+KEK+PGHH     +   VSTT P   S +     +   EKKG++EKIK
Sbjct: 132 GEEDKKGLVEKIKEKLPGHHDKTAEDDVPVSTTIPVPVSESVVEHDHPEEEKKGLVEKIK 191

[Close]

BLAST of Bhi09G001205 vs. ExPASy Swiss-Prot
Match: P30287 (Dehydrin Rab25 OS=Oryza sativa subsp. japonica OX=39947 GN=RAB25 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-11
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKMPGHH---------HEPQAVSTTTPSGYSSAQYGGQYE 63
           S+DDG GGRR+KK +KEK+KEK+PG H         H   A  T T +G  +A   G++E
Sbjct: 154 SEDDGQGGRRKKKSIKEKIKEKLPGSHKQEEQKQAGHTAPAAGTGTGTGTHAA---GKHE 213

Query: 64  KKGIMEKIKEKLSGH 70
           KKGI+EKIKEKL GH
Sbjct: 214 KKGIVEKIKEKLPGH 225

[Close]

BLAST of Bhi09G001205 vs. ExPASy Swiss-Prot
Match: P30185 (Dehydrin Rab18 OS=Arabidopsis thaliana OX=3702 GN=RAB18 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-10
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKMPGHHHEPQAVSTT--TPSGYSSAQYGGQ-YEKKGIME 63
           S+DDG GG RRKKG+ +K+KEK+PGHH +           SGY +  YGG+ +EKKG+M+
Sbjct: 117 SEDDGQGG-RRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGMMD 176

Query: 64  KIKEKLSG 69
           KIKEKL G
Sbjct: 177 KIKEKLPG 183

[Close]

BLAST of Bhi09G001205 vs. ExPASy Swiss-Prot
Match: P12950 (Dehydrin DHN1 OS=Zea mays OX=4577 GN=DHN1 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 4.8e-10
Identity = 41/86 (47.67%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKMPGHHHEPQAVSTTT-----PSGYSSAQYG-------- 63
           S+DDG GG RRKKG+KEK+KEK+PG H + Q  + TT       G++ + YG        
Sbjct: 84  SEDDGMGG-RRKKGIKEKIKEKLPGGHKDDQHATATTGGAYGQQGHTGSAYGQQGHTGGA 143

Query: 64  ------GQYEKKGIMEKIKEKLSGHH 71
                 G  EKKGIM+KIKEKL G H
Sbjct: 144 YATGTEGTGEKKGIMDKIKEKLPGQH 168

[Close]

BLAST of Bhi09G001205 vs. ExPASy Swiss-Prot
Match: P25863 (Dehydrin Xero 1 OS=Arabidopsis thaliana OX=3702 GN=XERO1 PE=2 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-09
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 4   SKDDGHGGRRR-KKGLKEKVKEKMPGHHHEPQAVST-TTPSGYSSAQYGGQYEKKGIMEK 63
           S+DDG GGRRR KKG+ EK+KEK+PGHH   +  S  +T + Y +      +EKKG+MEK
Sbjct: 61  SEDDGLGGRRRKKKGITEKIKEKLPGHHDSNKTSSLGSTTTAYDTGTV--HHEKKGMMEK 120

Query: 64  IKEKLSGHH 71
           IKEKL G H
Sbjct: 121 IKEKLPGGH 127

[Close]

BLAST of Bhi09G001205 vs. ExPASy Swiss-Prot
Match: A8CVF3 (Dehydrin DHN1 OS=Avicennia marina OX=82927 GN=DHN1 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-09
Identity = 40/74 (54.05%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKMPGHHHEPQAVSTTTP-SGYSSAQYGG------QYEKK 63
           S+DDG GG RRKKG+KEK+KEK+PG  H       T P SG    ++GG        EKK
Sbjct: 122 SEDDGQGG-RRKKGIKEKIKEKLPGGGHGDDQTHPTPPGSGGYGYEHGGAAESPEHEEKK 181

Query: 64  GIMEKIKEKLSGHH 71
           GIM+KIKEKL G H
Sbjct: 182 GIMDKIKEKLPGGH 194

[Close]

BLAST of Bhi09G001205 vs. ExPASy TrEMBL
Match: A0A0A0KWM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045040 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.3e-22
Identity = 58/68 (85.29%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKMPGHH-HEPQAVSTTTPSGYSSAQYGGQYEKKGIMEKI 63
           S+DDGHGG RRKKGLKEKVKEK+PGHH HE QAVSTTTP GY+SA+YGGQ+EKKGIMEKI
Sbjct: 111 SEDDGHGG-RRKKGLKEKVKEKLPGHHRHEEQAVSTTTPGGYTSAEYGGQHEKKGIMEKI 170

Query: 64  KEKLSGHH 71
           KEKL GHH
Sbjct: 171 KEKLPGHH 177

[Close]

BLAST of Bhi09G001205 vs. ExPASy TrEMBL
Match: A0A5D3CYN8 (Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005140 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21
Identity = 57/68 (83.82%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKMPG-HHHEPQAVSTTTPSGYSSAQYGGQYEKKGIMEKI 63
           S+DDGHGG RRKKGLKEKVKEK+PG HHHE QAVSTTTP GY+SA++GGQ+EKKGIMEKI
Sbjct: 111 SEDDGHGG-RRKKGLKEKVKEKLPGRHHHEGQAVSTTTPGGYASAEHGGQHEKKGIMEKI 170

Query: 64  KEKLSGHH 71
           KEKL GHH
Sbjct: 171 KEKLPGHH 177

[Close]

BLAST of Bhi09G001205 vs. ExPASy TrEMBL
Match: A0A1S3BTX2 (dehydrin DHN1 OS=Cucumis melo OX=3656 GN=LOC103493214 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21
Identity = 57/68 (83.82%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKMPG-HHHEPQAVSTTTPSGYSSAQYGGQYEKKGIMEKI 63
           S+DDGHGG RRKKGLKEKVKEK+PG HHHE QAVSTTTP GY+SA++GGQ+EKKGIMEKI
Sbjct: 111 SEDDGHGG-RRKKGLKEKVKEKLPGRHHHEGQAVSTTTPGGYASAEHGGQHEKKGIMEKI 170

Query: 64  KEKLSGHH 71
           KEKL GHH
Sbjct: 171 KEKLPGHH 177

[Close]

BLAST of Bhi09G001205 vs. ExPASy TrEMBL
Match: A0A6J1J0Z6 (dehydrin DHN1-like OS=Cucurbita maxima OX=3661 GN=LOC111481701 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.0e-20
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKMPGHH---HEPQAVSTTTPSGYSSAQYGGQYEKKGIME 63
           S+DDGHGG RRKKGLKEK+KEK+PGHH    +PQA STTTP GYSS ++GGQYEKKGIM+
Sbjct: 104 SEDDGHGG-RRKKGLKEKIKEKLPGHHDTAQQPQATSTTTPGGYSSVEHGGQYEKKGIMD 163

Query: 64  KIKEKLSGHH 71
           KIKEKL GH+
Sbjct: 164 KIKEKLPGHN 172

[Close]

BLAST of Bhi09G001205 vs. ExPASy TrEMBL
Match: A0A6J1FRT8 (dehydrin Rab16B-like OS=Cucurbita moschata OX=3662 GN=LOC111447593 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 4   SKDDGHGGRRRKKGLKEKVKEKMPGHH---HEPQAVSTTTPSGYSSAQYGGQYEKKGIME 63
           S+DDGHGG RRKKGLKEK+KEK+PGHH    +P A STTTP GYSS ++GGQ+EKKGIM+
Sbjct: 104 SEDDGHGG-RRKKGLKEKIKEKLPGHHDTAQQPHATSTTTPGGYSSVEHGGQHEKKGIMD 163

Query: 64  KIKEKLSGHH 71
           KIKEKL GH+
Sbjct: 164 KIKEKLPGHN 172

The following BLAST results are available for this feature:

BLAST of Bhi09G001205 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66400.1	1.2e-11	54.41	Dehydrin family protein	[more]
AT5G66400.2	1.5e-11	54.41	Dehydrin family protein	[more]
AT3G50980.1	7.5e-11	55.07	dehydrin xero 1	[more]
AT2G21490.1	4.9e-10	52.94	dehydrin LEA	[more]
AT1G20440.1	1.6e-08	50.75	cold-regulated 47	[more]

BLAST of Bhi09G001205 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30287	1.5e-11	53.33	Dehydrin Rab25 OS=Oryza sativa subsp. japonica OX=39947 GN=RAB25 PE=2 SV=2	[more]
P30185	1.6e-10	54.41	Dehydrin Rab18 OS=Arabidopsis thaliana OX=3702 GN=RAB18 PE=2 SV=1	[more]
P12950	4.8e-10	47.67	Dehydrin DHN1 OS=Zea mays OX=4577 GN=DHN1 PE=1 SV=2	[more]
P25863	1.1e-09	55.07	Dehydrin Xero 1 OS=Arabidopsis thaliana OX=3702 GN=XERO1 PE=2 SV=2	[more]
A8CVF3	1.8e-09	54.05	Dehydrin DHN1 OS=Avicennia marina OX=82927 GN=DHN1 PE=1 SV=1	[more]

BLAST of Bhi09G001205 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWM9	3.3e-22	85.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045040 PE=3 SV=1	[more]
A0A5D3CYN8	1.6e-21	83.82	Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005140 ...	[more]
A0A1S3BTX2	1.6e-21	83.82	dehydrin DHN1 OS=Cucumis melo OX=3656 GN=LOC103493214 PE=3 SV=1	[more]
A0A6J1J0Z6	9.0e-20	75.71	dehydrin DHN1-like OS=Cucurbita maxima OX=3661 GN=LOC111481701 PE=3 SV=1	[more]
A0A6J1FRT8	1.3e-18	72.86	dehydrin Rab16B-like OS=Cucurbita moschata OX=3662 GN=LOC111447593 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 4..70 e-value: 3.9E-23 score: 82.7
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 4..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..49
None	No IPR available	PANTHER	PTHR33346:SF29	DEHYDRIN RAB18	coord: 4..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M001205	Bhi09M001205	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009631	cold acclimation
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009415	response to water
cellular_component	GO:0005829	cytosol