Bhi09G001154 (gene) Wax gourd (B227) v1

Overview
NameBhi09G001154
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 41
Locationchr9: 34997528 .. 34999959 (+)
RNA-Seq ExpressionBhi09G001154
SyntenyBhi09G001154
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTATTCTTCTTAGGTTCTTAGACAATTACAAATGTGTATGGAATTTCAAAACCCTCTTTTCCCCATTAACTTTTATTGAAGCTTCTTCACCCTACCCCCTCTCTCTCTCTCTCTTTTCTCCTCTCTTTGTATTTGTGTTTCAATCTAGCTATTACCAACTTCTCTCTCTTCTATTTTTTTTTTTTTTTGCTCTGTCTCTCTCTTCCTTCTTAGGTGTGTTTGCTGGTTCATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTCTTGTCTTAAATTGCATGGCAACTGCTACACTAAAACCATCTTCATCATCTCACTTTCTCCCACCAAAATCTTCCATTCTCTTTCTCTCTCTCTTCTTCTTCTTTCTCCTCCTTCTAACCCTCATTTCCTCTCCTCATCCTCTTTCCCCTCCTTCCATGGCTCTCGACCGCCACCGCCTTCTCTCCGCCTCCTCCTCCGTATTCCATCCAAAGAAATCTCGACCTCGAACCTCCCCCCCTACGGCCGGAGAGTTCGGAGCTGAAGCCCATGAAGTTCCTAGTGGTCCAAACCCTATATCCAACTAATGGAATGAAAGCAAAGCAAAGGAAAGAACAAAAAAAAGAAACATTTGCAGAGGTTTGATGTTTTTGTGTTTGTTTAATTGTCGCTGCTGATGTTGTGTCTTTATTTTTTAGTTTTTTCTTTTTTTTTTTTACTTTTTGTTGGGTTTATTTTAATTAATTGTATAGCGACAAATATACTGCAGCGTTCATCTTCTTCTTCTTTTTCTTCTTTTTCTTTTTTCCTATTTGTATGTAATAGCCTCTATTTCTTGCATATATAGAAGGTGATGGTTTGGATATTAATTATAATTGGATTAAACTCATATATTAGAGATTTTTGAGAGTTTAATTTCTTGTATGTGTTTTTCATTGAGCATATATTAAACGAATAAATTTATCCCCTTTTTTTATTACCCTAAATATGTTTGAGTTGAGTAGTAATTTAATATGAAATTAAAGGATATGTGTAGATTGGTTTTCGAAAATTCAAAAACCCAATTCTTAAGATAATTATTTTAAATGGTAAAATTACTGAAAATATATTTTCAAGTCTAATAAAATGTTTTTGTCTATCGGTGTTAAATCGCGAAAGATATCTATCACTGACATTAATGTCTATCGCGGCCTATCATTGATAGATAGTAAAATTTTACTATATTTATAAAGATGTTGACTCATTTTCCTTTATTTCAAAATAATTCAAAGTCTTATAATGTTTGTAGTTCAGTTTCTCTTGTTCATAAGTTTGTGTCAAGTATATTGAATCTTAGAGAATATATTAGTTACCCAACGCTGATTTAGGAGGAATGTTGTGAGTTCAAATGCCTATAATTTTATTTTCTAAAATTGATATAACTAACTCGTGCATTTTTATTCTTGGAAATCAAATTAATTTTCAAGCCTAGAAAAGTGTATTAAAAAGGAATTTATGCAAGAGTTTTGATTTCAAATCTCTACATCTTTTGATTTTTATTTTTGAAAATTAAACCTATTTTATCCATATTTCTTACACCAACTTGCATCTTTCTTAAGTAGAATGATTGAATTCTTAGCTAAATTCTTAAAACAAAAACTACTTTTTCTAGTTCTCAAAATTTGGTTTCGTTTTTTAAACCGCTCGTGAAAAGTAGATAATAAAGGAAGAAATTTAGAGGTGAAAATAGTGTCCATAGACTTAATTTTCAAAACCAAAAACCAAAAAACAAAATGACTATCCAATGAGACCCACAATATTACAATTCAGGTTGGTTGAACTTTAAATGATATTAAATTTTGATGTATTTTTGCTTCAAAATTAAATCAATTGACTTTTTCAAAATGGTATTAAATTTTAAAAAATTAATTACCATACCCTTATTAATTGCCACTAATAGTCGATAAAATAGGTCTCGTAGTCAGAATAAATGGACAATAGCTCCCTTAAAGAAAGAGAGCATGAGTGTCGAAATACATAGGCAATGATTAATTGAGTGTAGCCTATACTTATTTCTATACCGTTCTCATTTATCACACAACAGAAAAAATAACAATTCATTTTTTTTTTCGAAAAAGAATTATTTACTAGTGATAAATTTTAAATATTGAACAACTAGTAAGGTGTACAAAGATAGTTAATTTTTCAAAACATATTATATAACTAAAATCCACTGTAACCAATTAACTCGTGTTTTTGTTATATATAAGAATGAAAACCATTATATTAAAAGTATACATATATGTATATGTATGAAAGATTATTGAAAAATATTAGAGCATATAATATAGAAGGGGAAGTATTAAAATGTGAAATTATTTTTTGGTAAAGAAGAATATAAAGCAGTGAAGGAGAGGAACAGCAG

mRNA sequence

AAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTATTCTTCTTAGGTTCTTAGACAATTACAAATGTGTATGGAATTTCAAAACCCTCTTTTCCCCATTAACTTTTATTGAAGCTTCTTCACCCTACCCCCTCTCTCTCTCTCTCTTTTCTCCTCTCTTTGTATTTGTGTTTCAATCTAGCTATTACCAACTTCTCTCTCTTCTATTTTTTTTTTTTTTTGCTCTGTCTCTCTCTTCCTTCTTAGGTGTGTTTGCTGGTTCATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTCTTGTCTTAAATTGCATGGCAACTGCTACACTAAAACCATCTTCATCATCTCACTTTCTCCCACCAAAATCTTCCATTCTCTTTCTCTCTCTCTTCTTCTTCTTTCTCCTCCTTCTAACCCTCATTTCCTCTCCTCATCCTCTTTCCCCTCCTTCCATGGCTCTCGACCGCCACCGCCTTCTCTCCGCCTCCTCCTCCGTATTCCATCCAAAGAAATCTCGACCTCGAACCTCCCCCCCTACGGCCGGAGAGTTCGGAGCTGAAGCCCATGAAGTTCCTAGTGGTCCAAACCCTATATCCAACTAATGGAATGAAAGCAAAGCAAAGGAAAGAACAAAAAAAAGAAACATTTGCAGAGAATATAAAGCAGTGAAGGAGAGGAACAGCAG

Coding sequence (CDS)

ATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTCTTGTCTTAAATTGCATGGCAACTGCTACACTAAAACCATCTTCATCATCTCACTTTCTCCCACCAAAATCTTCCATTCTCTTTCTCTCTCTCTTCTTCTTCTTTCTCCTCCTTCTAACCCTCATTTCCTCTCCTCATCCTCTTTCCCCTCCTTCCATGGCTCTCGACCGCCACCGCCTTCTCTCCGCCTCCTCCTCCGTATTCCATCCAAAGAAATCTCGACCTCGAACCTCCCCCCCTACGGCCGGAGAGTTCGGAGCTGAAGCCCATGAAGTTCCTAGTGGTCCAAACCCTATATCCAACTAA

Protein sequence

MDIEPLWGVGGWFLVLNCMATATLKPSSSSHFLPPKSSILFLSLFFFFLLLLTLISSPHPLSPPSMALDRHRLLSASSSVFHPKKSRPRTSPPTAGEFGAEAHEVPSGPNPISN
Homology
BLAST of Bhi09G001154 vs. TAIR 10
Match: AT3G24770.1 (CLAVATA3/ESR-RELATED 41 )

HSP 1 Score: 42.0 bits (97), Expect = 3.8e-04
Identity = 34/90 (37.78%), Postives = 45/90 (50.00%), Query Frame = 0

Query: 27  SSSSHFLPPKSSILFLSLFFFFLLL--LTLISSPHPLSPPSMALDRHRLLSASSSVFHPK 86
           + SSH        +FLSL  F  L   +T   S   ++P    L    + ++S+    PK
Sbjct: 10  TKSSHSRTLLLLFIFLSLLLFSSLTIPMTRHQSTSMVAPFKRVLLESSVPASSTMDLRPK 69

Query: 87  KSRPRTSPPTAGEFGAEAHEVPSGPNPISN 115
            S  R+      EFG +AHEVPSGPNPISN
Sbjct: 70  ASTRRSRTSRRREFGNDAHEVPSGPNPISN 99

BLAST of Bhi09G001154 vs. ExPASy Swiss-Prot
Match: A1EC31 (CLAVATA3/ESR (CLE)-related protein TDIF OS=Zinnia violacea OX=34245 GN=TDIF PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.5e-10
Identity = 49/132 (37.12%), Postives = 65/132 (49.24%), Query Frame = 0

Query: 1   MDIEPLWGVGGWFLVL------NCMATATLKPSSSSHFLPPKS-SILFLSLFFFFLLLLT 60
           MDI+ LW  GGWF +L       CMA      S  SHF  P+S S LF        +L+T
Sbjct: 1   MDIDLLWSFGGWFFILFPETINYCMAKLR-STSQISHFTNPRSCSSLFFVALLIITILIT 60

Query: 61  LISSPHPLSPPSM------ALDRHRLLSASSSV-----FHPKKSRPRTSPPTAGEFGAEA 115
           ++ S   +   S+      + + H   S SS+       HPK++  ++ P     F A A
Sbjct: 61  MLQSSTSMEVTSLPTHQPTSSNSHDESSTSSTATTTTDLHPKRTHHQSHPKPTRSFEAGA 120

BLAST of Bhi09G001154 vs. ExPASy TrEMBL
Match: M5VZL5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G204100 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.7e-18
Identity = 69/134 (51.49%), Postives = 82/134 (61.19%), Query Frame = 0

Query: 1   MDIEPLWGVGGWFLVLNCMATA-TLKPSSSS------HFLPPKSSILFLSL-FFFFLLLL 60
           MDIEPLW +GGWFL+ NCMA A    PSSSS      H       +LFLSL FF FLLL+
Sbjct: 1   MDIEPLWALGGWFLLPNCMAAAPKTSPSSSSPSVTEFHTKLNPCLLLFLSLVFFIFLLLV 60

Query: 61  TLISSPHPLSPPSMALDRHRLL------SASSSVFHPKKSRPRTSPPTAG------EFGA 115
           + IS+P   SP SMA    RLL      + S++  HPKK++   +  T+       EFGA
Sbjct: 61  SPISNPTTTSPSSMASSSKRLLLEPSKPAMSTTNLHPKKTQNSRTSATSSTARARREFGA 120

BLAST of Bhi09G001154 vs. ExPASy TrEMBL
Match: A0A6P5TUT2 (CLAVATA3/ESR (CLE)-related protein 41 OS=Prunus avium OX=42229 GN=LOC110770681 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.4e-16
Identity = 69/139 (49.64%), Postives = 82/139 (58.99%), Query Frame = 0

Query: 1   MDIEPLWGVGGWFLVLNCMATA-TLKPSSSS------HFLPPKSSILFLSL-FFFFLLLL 60
           MDIEPLW +GGWFL+ NCMA A    PSSSS      H     S +LFLSL FF FLLL+
Sbjct: 1   MDIEPLWALGGWFLLPNCMAAAPKTSPSSSSPSVSEFHTKLNPSLLLFLSLVFFIFLLLV 60

Query: 61  TLISSPHPLSPPSMA--LDRHRLL------SASSSVFHPKKSRPRTSPPTAG-------- 115
           + IS+P   SP SMA      RLL      + S++  HPK ++   +  T+         
Sbjct: 61  SPISNPTTTSPSSMASSSSSKRLLLEPSKPAMSTTNLHPKNTQNSRTSATSSTSSTARAR 120

BLAST of Bhi09G001154 vs. ExPASy TrEMBL
Match: A0A0S3RV03 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G174300 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.8e-16
Identity = 59/124 (47.58%), Postives = 73/124 (58.87%), Query Frame = 0

Query: 1   MDIEPLWGVGGWFLVLNCMATATLKPSSSSHFLPP----KSSILFLSLFFFFLLLLTLIS 60
           MDIEPLW +GGWF + NCMA    +P SSS    P     S + FL+LFF  LLL+ L  
Sbjct: 1   MDIEPLWAIGGWFSLSNCMA----EPKSSSPISEPCSKSPSFLHFLTLFFILLLLINLSH 60

Query: 61  SPHPLSPPSMALDRHRLLSA-SSSVFHPKKSRPRTSPPTAG-----EFGAEAHEVPSGPN 115
            PHP +  S+   +    S  S++  HP+ S+   SP +       EFGAEAHEVPSGPN
Sbjct: 61  QPHPSTMASLESTKASSESTMSTTAMHPQNSQKSRSPSSKAASAKREFGAEAHEVPSGPN 120

BLAST of Bhi09G001154 vs. ExPASy TrEMBL
Match: A0A0D2PF23 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G225300 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.5e-16
Identity = 62/125 (49.60%), Postives = 78/125 (62.40%), Query Frame = 0

Query: 1   MDIEPLWGVGGWFLV-LNCMATATLKPSSSSH-----FLPPKSSILFLSLFFFFLLLLTL 60
           MDIEPLW +GGWF + ++CMA     PSSSS      F    S +  L+LFF FLLLL  
Sbjct: 1   MDIEPLWDLGGWFFIFIDCMAATPKTPSSSSSIVAETFAKSHSLLFLLTLFFIFLLLLNP 60

Query: 61  ISSPHPL-SP---PSMALDRHRLLSASSSVFHPKKSRP-RTSPPTAGEFGAEAHEVPSGP 115
             + +P+ SP   PS+   R  L ++S+   HPK++R   TS  +  EFGAEAHEVPSGP
Sbjct: 61  KPTNYPMDSPNGTPSIPFKRLLLDASSNMNLHPKQTRTLGTSSSSRREFGAEAHEVPSGP 120

BLAST of Bhi09G001154 vs. ExPASy TrEMBL
Match: A0A5D2JY12 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D08G242300v1 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.5e-16
Identity = 62/125 (49.60%), Postives = 78/125 (62.40%), Query Frame = 0

Query: 1   MDIEPLWGVGGWFLV-LNCMATATLKPSSSSH-----FLPPKSSILFLSLFFFFLLLLTL 60
           MDIEPLW +GGWF + ++CMA     PSSSS      F    S +  L+LFF FLLLL  
Sbjct: 1   MDIEPLWDLGGWFFIFIDCMAATPKTPSSSSSIVAETFAKSHSLLFLLTLFFIFLLLLNP 60

Query: 61  ISSPHPL-SP---PSMALDRHRLLSASSSVFHPKKSRP-RTSPPTAGEFGAEAHEVPSGP 115
             + +P+ SP   PS+   R  L ++S+   HPK++R   TS  +  EFGAEAHEVPSGP
Sbjct: 61  KPTNYPMDSPNGTPSIPFKRLLLDASSNMNLHPKQTRTLGTSSSSRREFGAEAHEVPSGP 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G24770.13.8e-0437.78CLAVATA3/ESR-RELATED 41 [more]
Match NameE-valueIdentityDescription
A1EC314.5e-1037.12CLAVATA3/ESR (CLE)-related protein TDIF OS=Zinnia violacea OX=34245 GN=TDIF PE=1... [more]
Match NameE-valueIdentityDescription
M5VZL54.7e-1851.49Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G204100 PE=4 SV=1[more]
A0A6P5TUT23.4e-1649.64CLAVATA3/ESR (CLE)-related protein 41 OS=Prunus avium OX=42229 GN=LOC110770681 P... [more]
A0A0S3RV035.8e-1647.58Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G... [more]
A0A0D2PF237.5e-1649.60Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G225300 PE=4 ... [more]
A0A5D2JY127.5e-1649.60Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D08G242300v1 P... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..114

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001154Bhi09M001154mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0110165 cellular anatomical entity