Bhi09G001050 (gene) Wax gourd (B227) v1

Overview
NameBhi09G001050
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionGag-pro-like protein
Locationchr9: 31297871 .. 31298584 (-)
RNA-Seq ExpressionBhi09G001050
SyntenyBhi09G001050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTTGAGATCATGGAGGAGTTCACTAGCCAAGTACAAGAAATCAGAAAGGATGTTGAAGAGTTAAAAGGACAAATGACAAAGGTTTTAAAATTGCTCACTTCGAAGAATGAGAAGGTTGTAGTAGGGGCATCCAAACAAGCAAAGTTGGAACAAAACCAAGCTTCATATGACATCTCTCTTTGCCCACGGGGTTTTACTCCAAAGAAGTTGTTAGATCCATCATTGGTAGGATTGAAGAACTACCTTACACAAAATCCTAGTCAAACTCCATAACAAATAAACCATTTGAGTGACCTATAATCCACCTTAAACATACATGGCTATAACAAGAAGATTTTTGAAGATGTAGACAATAAAAGAAGATTGGATTTTCTAGAAGAAAGATTGTGTGCATCAAAAGGTATCAATATTTATGAAGGCATTGAGGCGTCACAACTGTCTCTAGTCTTGGATGTCATTATTCCACCCAAGTTCAAAAAACCACAATTTAAAAAGTATAATGAGACAATTTACCCAAAAGGTCATCTCATCATGCACTGTTGAAGGATGTCGATCCAGGTCTATGATGATAAATTATTGATTCACTGCTTTCAAGATATCCTGATTGACTCAACTGCTCATTGGTATTTGCAGTTGAATAACTCGCATATTCACAAGTGGAAGGATTTGGCAAATTCGTTCGTGAAACAGCACAAGCACAAATATTGA

mRNA sequence

ATGAAAGTTGAGATCATGGAGGAGTTCACTAGCCAAGTACAAGAAATCAGAAAGGATGTTGAAGAGTTAAAAGGACAAATGACAAAGGTTTTAAAATTGCTCACTTCGAAGAATGAGAAGGTTGTAGTAGGGGCATCCAAACAAGCAAAGTTGGAACAAAACCAAGCTTCATATGACATCTCTCTTTGCCCACGGGGTTTTACTCCAAAGAAGTTGTTAGATCCATCATTGGTAGGATTGAAGAACTACCTTACACAAAATCCTAACAATAAAAGAAGATTGGATTTTCTAGAAGAAAGATTGTGTGCATCAAAAGGTATCAATATTTATGAAGGCATTGAGGCGTCACAACTGTCTCTAGTCTTGGATGTCATTATTCCACCCAAGTCATCTCATCATGCACTGTTGAAGGATGTCGATCCAGATATCCTGATTGACTCAACTGCTCATTGGTATTTGCAGTTGAATAACTCGCATATTCACAAGTGGAAGGATTTGGCAAATTCGTTCGTGAAACAGCACAAGCACAAATATTGA

Coding sequence (CDS)

ATGAAAGTTGAGATCATGGAGGAGTTCACTAGCCAAGTACAAGAAATCAGAAAGGATGTTGAAGAGTTAAAAGGACAAATGACAAAGGTTTTAAAATTGCTCACTTCGAAGAATGAGAAGGTTGTAGTAGGGGCATCCAAACAAGCAAAGTTGGAACAAAACCAAGCTTCATATGACATCTCTCTTTGCCCACGGGGTTTTACTCCAAAGAAGTTGTTAGATCCATCATTGGTAGGATTGAAGAACTACCTTACACAAAATCCTAACAATAAAAGAAGATTGGATTTTCTAGAAGAAAGATTGTGTGCATCAAAAGGTATCAATATTTATGAAGGCATTGAGGCGTCACAACTGTCTCTAGTCTTGGATGTCATTATTCCACCCAAGTCATCTCATCATGCACTGTTGAAGGATGTCGATCCAGATATCCTGATTGACTCAACTGCTCATTGGTATTTGCAGTTGAATAACTCGCATATTCACAAGTGGAAGGATTTGGCAAATTCGTTCGTGAAACAGCACAAGCACAAATATTGA

Protein sequence

MKVEIMEEFTSQVQEIRKDVEELKGQMTKVLKLLTSKNEKVVVGASKQAKLEQNQASYDISLCPRGFTPKKLLDPSLVGLKNYLTQNPNNKRRLDFLEERLCASKGINIYEGIEASQLSLVLDVIIPPKSSHHALLKDVDPDILIDSTAHWYLQLNNSHIHKWKDLANSFVKQHKHKY
Homology
BLAST of Bhi09G001050 vs. ExPASy TrEMBL
Match: A0A5A7ULI2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00770 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.4e-24
Identity = 79/223 (35.43%), Postives = 115/223 (51.57%), Query Frame = 0

Query: 12  QVQEIRKDVEELKGQMTKVLKLLTSKNEKVVVGASKQAKLEQNQASYDISLCPRGFTPKK 71
           +VQ +R+DVE LK Q+ K+L+LLT+   K V G S Q +++ NQ   D+   P+GFTP++
Sbjct: 22  KVQAVRQDVEGLKDQLAKILELLTTGRGKSVTGISSQVEVDLNQVLEDMPAYPQGFTPQR 81

Query: 72  LLDPSLVGLKNYLTQNPN-----------------------------NKRRLDFLEERLC 131
              P +     Y TQNPN                             +++RL+FLEERL 
Sbjct: 82  SSSPCM----TYPTQNPNPITQQENHVSDPMSTPITESGKKISEEQGSRKRLEFLEERLR 141

Query: 132 ASKGINIYEGIEASQLSLVLDVIIPPK---------------SSH--------------H 177
           A KG ++Y  I+A+QL L+ DV+IPPK                SH              +
Sbjct: 142 AIKGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDN 201

BLAST of Bhi09G001050 vs. ExPASy TrEMBL
Match: A0A5A7SM69 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00240 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.4e-24
Identity = 82/228 (35.96%), Postives = 117/228 (51.32%), Query Frame = 0

Query: 7   EEFTSQVQEIRKDVEELKGQMTKVLKLLTSKNEKVVVGASKQAKLEQNQASYDISLCPRG 66
           E+   QVQ +R+DVE LK Q+ K+L+LLT+   K V G S Q +++ NQ   D+   P+G
Sbjct: 3   EQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYPQG 62

Query: 67  FTPKKLLDPSLVGLKNYLTQNPN-----------------------------NKRRLDFL 126
           FTP++   P +     Y TQNPN                             +++RL+FL
Sbjct: 63  FTPQRSSSPRM----TYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEFL 122

Query: 127 EERLCASKGINIYEGIEASQLSLVLDVIIPPK---------------SSH---------- 177
           EERL A KG ++Y  I+A+QL L+ DV+IP K                SH          
Sbjct: 123 EERLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMSA 182

BLAST of Bhi09G001050 vs. ExPASy TrEMBL
Match: A0A1S4E3F0 (uncharacterized protein LOC107991868 OS=Cucumis melo OX=3656 GN=LOC107991868 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.4e-24
Identity = 82/228 (35.96%), Postives = 117/228 (51.32%), Query Frame = 0

Query: 7   EEFTSQVQEIRKDVEELKGQMTKVLKLLTSKNEKVVVGASKQAKLEQNQASYDISLCPRG 66
           E+   QVQ +R+DVE LK Q+ K+L+LLT+   K V G S Q +++ NQ   D+   P+G
Sbjct: 3   EQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYPQG 62

Query: 67  FTPKKLLDPSLVGLKNYLTQNPN-----------------------------NKRRLDFL 126
           FTP++   P +     Y TQNPN                             +++RL+FL
Sbjct: 63  FTPQRSSSPRM----TYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEFL 122

Query: 127 EERLCASKGINIYEGIEASQLSLVLDVIIPPK---------------SSH---------- 177
           EERL A KG ++Y  I+A+QL L+ DV+IP K                SH          
Sbjct: 123 EERLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMSA 182

BLAST of Bhi09G001050 vs. ExPASy TrEMBL
Match: A0A5D3C562 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00220 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 5.3e-24
Identity = 82/228 (35.96%), Postives = 116/228 (50.88%), Query Frame = 0

Query: 7   EEFTSQVQEIRKDVEELKGQMTKVLKLLTSKNEKVVVGASKQAKLEQNQASYDISLCPRG 66
           E+   QVQ +R+DVE LK Q+ K+L+LLT+   K V G S Q +++ NQ   D+   P G
Sbjct: 3   EQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYPPG 62

Query: 67  FTPKKLLDPSLVGLKNYLTQNPN-----------------------------NKRRLDFL 126
           FTP++   P +     Y TQNPN                             +++RL+FL
Sbjct: 63  FTPQRSSSPRM----TYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEFL 122

Query: 127 EERLCASKGINIYEGIEASQLSLVLDVIIPPK---------------SSH---------- 177
           EERL A KG ++Y  I+A+QL L+ DV+IP K                SH          
Sbjct: 123 EERLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMSA 182

BLAST of Bhi09G001050 vs. ExPASy TrEMBL
Match: A0A5D3CYF0 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003390 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.2e-23
Identity = 77/211 (36.49%), Postives = 111/211 (52.61%), Query Frame = 0

Query: 7   EEFTSQVQEIRKDVEELKGQMTKVLKLLTSKNEKVVVGASKQAKLEQNQASYDISLCPRG 66
           E+   QVQ +R+DVE LK Q+TK+L LLT+   K V G S Q ++++NQ   D+     G
Sbjct: 3   EQTDDQVQAVRQDVEGLKDQLTKILGLLTTGRGKSVAGTSSQVEVDRNQVLEDMPAYSPG 62

Query: 67  FTPKKLLDPSLVGLKNYL------------TQNPNNKRRLDFLEERLCASKGINIYEGIE 126
           FTP++   P +    + L            ++   ++RRL+FLEE+L A +G N+Y  I 
Sbjct: 63  FTPQRSSSPRMAAYVSDLISTLITEGGKKISEEKGSRRRLEFLEEKLHAIEGANMYGSIN 122

Query: 127 ASQLSLVLDVIIPPK---------------SSH--------------HALLKDVDPDILI 177
           A+QL L+  V IPPK                SH                LL     D LI
Sbjct: 123 ATQLCLISAVAIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLIHCFQDSLI 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7ULI22.4e-2435.43Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7SM692.4e-2435.96Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120... [more]
A0A1S4E3F02.4e-2435.96uncharacterized protein LOC107991868 OS=Cucumis melo OX=3656 GN=LOC107991868 PE=... [more]
A0A5D3C5625.3e-2435.96Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718... [more]
A0A5D3CYF01.2e-2336.49Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..33

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001050Bhi09M001050mRNA