Bhi09G001044 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G001044
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	ATP synthase subunit beta, chloroplastic
Location	chr9: 31137282 .. 31137593 (-)
RNA-Seq Expression	Bhi09G001044
Synteny	Bhi09G001044

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAATCGTCGGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCAGAATATTTCCGAGATGTTAATGAACAAGACGTGCTTCTATTTATCGACAATATCTTCCATTTCGTTCAAGCGGGATCCGAAGTATCCGCGTTACTGGGTAGAATGCCTTCGGCTGTGGGTTATCAACCGACTCTTAGTACCGAAATGGATTCCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGTCCATAACTTTTATTCAAGCTGTTTATGTACCTGCGAACGATTTGACCGATCCTGCTCCTGCCAATTAA

mRNA sequence

ATGAATGAATCGTCGGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCAGAATATTTCCGAGATGTTAATGAACAAGACGTGCTTCTATTTATCGACAATATCTTCCATTTCGTTCAAGCGGGATCCGAAGTATCCGCGTTACTGGGTAGAATGCCTTCGGCTGTGGGTTATCAACCGACTCTTAGTACCGAAATGGATTCCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGTCCATAACTTTTATTCAAGCTGTTTATGTACCTGCGAACGATTTGACCGATCCTGCTCCTGCCAATTAA

Coding sequence (CDS)

ATGAATGAATCGTCGGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCAGAATATTTCCGAGATGTTAATGAACAAGACGTGCTTCTATTTATCGACAATATCTTCCATTTCGTTCAAGCGGGATCCGAAGTATCCGCGTTACTGGGTAGAATGCCTTCGGCTGTGGGTTATCAACCGACTCTTAGTACCGAAATGGATTCCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGTCCATAACTTTTATTCAAGCTGTTTATGTACCTGCGAACGATTTGACCGATCCTGCTCCTGCCAATTAA

Protein sequence

MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGYQPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPAN

Homology

[Close]

BLAST of Bhi09G001044 vs. TAIR 10
Match: ATCG00480.1 (ATP synthase subunit beta )

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-46
Identity = 94/102 (92.16%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF FVQAGSEVSALLGRMPSAVGY
Sbjct: 239 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 298

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTLSTEM +LQERITSTK+GSIT IQAVYVPA+DLTDPAPA
Sbjct: 299 QPTLSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPA 340

[Close]

BLAST of Bhi09G001044 vs. TAIR 10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 158.7 bits (400), Expect = 2.5e-39
Identity = 78/102 (76.47%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GAR RVGLT LT+AEYFRD   QDVLLFIDNIF F QA SEVSALLGR+PSAVGY
Sbjct: 299 MNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGY 358

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTL++++ +LQERIT+TK+GSIT +QA+YVPA+DLTDPAPA
Sbjct: 359 QPTLASDLGALQERITTTKKGSITSVQAIYVPADDLTDPAPA 400

[Close]

BLAST of Bhi09G001044 vs. TAIR 10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 158.7 bits (400), Expect = 2.5e-39
Identity = 78/102 (76.47%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GAR RVGLT LT+AEYFRD   QDVLLFIDNIF F QA SEVSALLGR+PSAVGY
Sbjct: 302 MNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGY 361

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTL++++ +LQERIT+TK+GSIT +QA+YVPA+DLTDPAPA
Sbjct: 362 QPTLASDLGALQERITTTKKGSITSVQAIYVPADDLTDPAPA 403

[Close]

BLAST of Bhi09G001044 vs. TAIR 10
Match: AT5G08690.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 158.7 bits (400), Expect = 2.5e-39
Identity = 78/102 (76.47%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GAR RVGLT LT+AEYFRD   QDVLLFIDNIF F QA SEVSALLGR+PSAVGY
Sbjct: 299 MNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGY 358

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTL++++ +LQERIT+TK+GSIT +QA+YVPA+DLTDPAPA
Sbjct: 359 QPTLASDLGALQERITTTKKGSITSVQAIYVPADDLTDPAPA 400

[Close]

BLAST of Bhi09G001044 vs. ExPASy Swiss-Prot
Match: Q3V527 (ATP synthase subunit beta, chloroplastic OS=Acorus calamus OX=4465 GN=atpB PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.7e-46
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF FVQAGSEVSALLGRMPSAVGY
Sbjct: 239 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 298

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTLSTEM SLQERITSTKEGSIT IQAVYVPA+DLTDPAPA
Sbjct: 299 QPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPA 340

[Close]

BLAST of Bhi09G001044 vs. ExPASy Swiss-Prot
Match: Q7HDI4 (ATP synthase subunit beta, chloroplastic OS=Acrocomia aculeata OX=169987 GN=atpB PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.7e-46
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF FVQAGSEVSALLGRMPSAVGY
Sbjct: 239 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 298

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTLSTEM SLQERITSTKEGSIT IQAVYVPA+DLTDPAPA
Sbjct: 299 QPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPA 340

[Close]

BLAST of Bhi09G001044 vs. ExPASy Swiss-Prot
Match: Q9TMQ4 (ATP synthase subunit beta, chloroplastic OS=Albuca bracteata OX=82047 GN=atpB PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.7e-46
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF FVQAGSEVSALLGRMPSAVGY
Sbjct: 239 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 298

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTLSTEM SLQERITSTKEGSIT IQAVYVPA+DLTDPAPA
Sbjct: 299 QPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPA 340

[Close]

BLAST of Bhi09G001044 vs. ExPASy Swiss-Prot
Match: Q9MRV8 (ATP synthase subunit beta, chloroplastic OS=Aristolochia macrophylla OX=12949 GN=atpB PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.7e-46
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF FVQAGSEVSALLGRMPSAVGY
Sbjct: 239 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 298

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTLSTEM SLQERITSTKEGSIT IQAVYVPA+DLTDPAPA
Sbjct: 299 QPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPA 340

[Close]

BLAST of Bhi09G001044 vs. ExPASy Swiss-Prot
Match: Q95AF8 (ATP synthase subunit beta, chloroplastic OS=Aspidistra elatior OX=39526 GN=atpB PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.7e-46
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF FVQAGSEVSALLGRMPSAVGY
Sbjct: 239 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 298

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTLSTEM SLQERITSTKEGSIT IQAVYVPA+DLTDPAPA
Sbjct: 299 QPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPA 340

[Close]

BLAST of Bhi09G001044 vs. ExPASy TrEMBL
Match: A0A0D3M9Z6 (ATP synthase subunit beta OS=Paphiopedilum armeniacum OX=53069 GN=atpB PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY
Sbjct: 239 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 298

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTLSTEM SLQERITSTKEGSIT IQAVYVPA+DLTDPAPA
Sbjct: 299 QPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPA 340

[Close]

BLAST of Bhi09G001044 vs. ExPASy TrEMBL
Match: A0A0S1RF98 (ATP synthase subunit beta, chloroplastic OS=Polygonatum cyrtonema OX=195526 GN=atpB PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY
Sbjct: 232 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 291

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTLSTEM SLQERITSTKEGSIT IQAVYVPA+DLTDPAPA
Sbjct: 292 QPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPA 333

[Close]

BLAST of Bhi09G001044 vs. ExPASy TrEMBL
Match: Q9BA80 (ATP synthase subunit beta, chloroplastic OS=Reinhardtia simplex OX=131291 GN=atpB PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.6e-44
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF FVQAGSEVSALLGRMPSAVGY
Sbjct: 239 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 298

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTLSTEMDSLQERITSTKEGSIT IQAVYVPA+DLTDPAPA
Sbjct: 299 QPTLSTEMDSLQERITSTKEGSITSIQAVYVPADDLTDPAPA 340

[Close]

BLAST of Bhi09G001044 vs. ExPASy TrEMBL
Match: Q9MRG7 (ATP synthase subunit beta, chloroplastic OS=Hedyosmum arborescens OX=13559 GN=atpB PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNES GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF FVQAGSEVSALLGRMPSAVGY
Sbjct: 239 MNESPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 298

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTLSTEM SLQERITSTKEGSIT IQAVYVPA+DLTDPAPA
Sbjct: 299 QPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPA 340

[Close]

BLAST of Bhi09G001044 vs. ExPASy TrEMBL
Match: A0A1L1YQW6 (ATP synthase subunit beta, chloroplastic OS=Paeonia lactiflora OX=35924 GN=atpB PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44
Identity = 96/102 (94.12%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MNESSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 60
           MNE  GARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY
Sbjct: 239 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSAVGY 298

Query: 61  QPTLSTEMDSLQERITSTKEGSITFIQAVYVPANDLTDPAPA 103
           QPTLSTEM +LQERITSTKEGSIT IQAVYVPA+DLTDPAPA
Sbjct: 299 QPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPA 340

The following BLAST results are available for this feature:

BLAST of Bhi09G001044 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00480.1	1.3e-46	92.16	ATP synthase subunit beta	[more]
AT5G08670.1	2.5e-39	76.47	ATP synthase alpha/beta family protein	[more]
AT5G08680.1	2.5e-39	76.47	ATP synthase alpha/beta family protein	[more]
AT5G08690.1	2.5e-39	76.47	ATP synthase alpha/beta family protein	[more]

BLAST of Bhi09G001044 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3V527	2.7e-46	94.12	ATP synthase subunit beta, chloroplastic OS=Acorus calamus OX=4465 GN=atpB PE=3 ...	[more]
Q7HDI4	2.7e-46	94.12	ATP synthase subunit beta, chloroplastic OS=Acrocomia aculeata OX=169987 GN=atpB...	[more]
Q9TMQ4	2.7e-46	94.12	ATP synthase subunit beta, chloroplastic OS=Albuca bracteata OX=82047 GN=atpB PE...	[more]
Q9MRV8	2.7e-46	94.12	ATP synthase subunit beta, chloroplastic OS=Aristolochia macrophylla OX=12949 GN...	[more]
Q95AF8	2.7e-46	94.12	ATP synthase subunit beta, chloroplastic OS=Aspidistra elatior OX=39526 GN=atpB ...	[more]

BLAST of Bhi09G001044 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0D3M9Z6	1.2e-44	95.10	ATP synthase subunit beta OS=Paphiopedilum armeniacum OX=53069 GN=atpB PE=3 SV=1	[more]
A0A0S1RF98	1.2e-44	95.10	ATP synthase subunit beta, chloroplastic OS=Polygonatum cyrtonema OX=195526 GN=a...	[more]
Q9BA80	1.6e-44	95.10	ATP synthase subunit beta, chloroplastic OS=Reinhardtia simplex OX=131291 GN=atp...	[more]
Q9MRG7	2.6e-44	95.10	ATP synthase subunit beta, chloroplastic OS=Hedyosmum arborescens OX=13559 GN=at...	[more]
A0A1L1YQW6	2.6e-44	94.12	ATP synthase subunit beta, chloroplastic OS=Paeonia lactiflora OX=35924 GN=atpB ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 1..102 e-value: 7.7E-30 score: 104.2
None	No IPR available	GENE3D	3.40.50.12240		coord: 1..103 e-value: 8.8E-48 score: 165.0
None	No IPR available	PANTHER	PTHR15184	ATP SYNTHASE	coord: 1..102
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M001044	Bhi09M001044	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042776	mitochondrial ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005753	mitochondrial proton-transporting ATP synthase complex
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism