Bhi09G000893 (gene) Wax gourd (B227) v1

Overview
NameBhi09G000893
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionLysine-rich arabinogalactan protein like
Locationchr9: 25146682 .. 25148427 (-)
RNA-Seq ExpressionBhi09G000893
SyntenyBhi09G000893
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACTTCATAAAAAGCCGAGCCCCGCTACGGCTTCTTTAAACCCCGACGAAGATGAAAAAAGATGAAGAACAAGCCGCCCGATTCATTCAACTTCCCACTTCAATCACTCGTAGAAAGACCACTTCATCAATGAAACCCACAAACCCCATTACCAATTTCAGGTCAGTTCATGTTTCATCTCTTCCGTTTTCTTTTTTCCGATTTTGTTGAACCATTTCTGTGTTGTGAGGTTAACATTCTTAAGCAGCATTTTTAATTTCTTTCTTGTTGTTATTGTTTCTTTAGATTAAGGATTTCTCGAGTTCGTCGTTGAGATTATGAGTTGTGGATCTTTATATCGATTTTGCAATTGAATGCTTTTGGAGTTTGATTCTGCGATGGAAACATTGGTGATTGTAGAACAGTACAGAGATGAGTTCTGTTATCGGGTCAAAACTCTAGAATCGGGTCGATTTGGGAATTTGACGATTAAAGATCATAATCGATTGAGTTTTCAACCGGGTACAGGATTTCGCCCACCTCCATTGGAGATTTCTTCAATTCCTGTTTATTGTTTCTCTTCCCCCAAAACACCACCCCCTTCCGCCGCAACAATTCCGATTAGTGGGGAAATTTGTGTTAACGAGAGCATTGATTTTGATGAACATTGCTGTTACAAGAGAATATCATTTCCTGAGCTTTGGGCTGGACCAACTTACTCGAATTCACCCCCTGCAAGTTCATTGCCAATCCCCAAATTTTCAATCCGAGGAAATAGAACAGTTTCACTCGAATTACCCACTAATTCAGTTGAAAAAATTCACCCAATTGTGAAATCTGCACCACCATCCCCAACTAGGGGCTATACTCATCCTTCTTCAAGAGAGCCATTCCATGGTGCTGATTCTGCTACAAGAACACTTAGAAGAATCCTTAACCTTGATGTTAACTCTGAATGAATGATATTTTTAGTGAGCATCAAGCTCACTTGTGTGTTTCGTTGATGGGGGGTTAGTGTATGCCTGTAAATGTAATGAAGAATCATGGTCGATATATGTAGGATTTAGAATTTTGATTCTCTTTTTAGTTTTTGAGAAGTGGGATTTGTAGCTGATGGTTAATATTCTCAGCTTTATTCAATCTCAAGCTTCTTAAAACTGTGAATGGTTGCTTTAGATATGGAGCTTGATTCAACAAGAGTAAAGCACCAAGGAATCCAGCCACCTCAAACTTCTTAGAAAAGAAGATAGAGAGAAAGGGAGAATGTATATTCTGTACTCTATCTTCTCACTTAATCTTCTTGTTCATCATACACTTTCATAGCTCTGATTTAGGCTTGTAAACTTAGATACTAGTACTTAAAATGAAATGTAGCTTAAAAGAATTCAAGGGTTCTTTTCGATTCCTTCTACTTTGATGATTCTTGTTCAAGAGATAGTCTCTGTCTATGTATCAGTCAAATTGTTCTTTTCACTATTTCTATATTTGCTTATCTGCTTTGTTGCAAAATCTTACCTGTTCTATCAGAGATTGTCGTTTGTTTGTCGATCATCAACGTTTTTTTCTTGCACGACCTTACATCTTGGCTCCTCTTGTAGTTCATCTTCCATCTTCTACATTATTTGAAGAGAAGAAGATGGCAAGGGAAATTATAACATGTAATTGTATTCGACTTTGTTTACTTTACCATGCTAGATTCCTTATACACTATTTGTTTAGACTTTTTACTGATAAAGTTCATCTGCTTGGAGTCAGATCATTGAGCC

mRNA sequence

AAACTTCATAAAAAGCCGAGCCCCGCTACGGCTTCTTTAAACCCCGACGAAGATGAAAAAAGATGAAGAACAAGCCGCCCGATTCATTCAACTTCCCACTTCAATCACTCGTAGAAAGACCACTTCATCAATGAAACCCACAAACCCCATTACCAATTTCAGATTAAGGATTTCTCGAGTTCGTCGTTGAGATTATGAGTTGTGGATCTTTATATCGATTTTGCAATTGAATGCTTTTGGAGTTTGATTCTGCGATGGAAACATTGGTGATTGTAGAACAGTACAGAGATGAGTTCTGTTATCGGGTCAAAACTCTAGAATCGGGTCGATTTGGGAATTTGACGATTAAAGATCATAATCGATTGAGTTTTCAACCGGGTACAGGATTTCGCCCACCTCCATTGGAGATTTCTTCAATTCCTGTTTATTGTTTCTCTTCCCCCAAAACACCACCCCCTTCCGCCGCAACAATTCCGATTAGTGGGGAAATTTGTGTTAACGAGAGCATTGATTTTGATGAACATTGCTGTTACAAGAGAATATCATTTCCTGAGCTTTGGGCTGGACCAACTTACTCGAATTCACCCCCTGCAAGTTCATTGCCAATCCCCAAATTTTCAATCCGAGGAAATAGAACAGTTTCACTCGAATTACCCACTAATTCAGTTGAAAAAATTCACCCAATTGTGAAATCTGCACCACCATCCCCAACTAGGGGCTATACTCATCCTTCTTCAAGAGAGCCATTCCATGGTGCTGATTCTGCTACAAGAACACTTAGAAGAATCCTTAACCTTGATGTTAACTCTGAATGAATGATATTTTTAGTGAGCATCAAGCTCACTTGTGTGTTTCGTTGATGGGGGGTTAGTGTATGCCTGTAAATGTAATGAAGAATCATGGTCGATATATGTAGGATTTAGAATTTTGATTCTCTTTTTAGTTTTTGAGAAGTGGGATTTGTAGCTGATGGTTAATATTCTCAGCTTTATTCAATCTCAAGCTTCTTAAAACTGTGAATGGTTGCTTTAGATATGGAGCTTGATTCAACAAGAGTAAAGCACCAAGGAATCCAGCCACCTCAAACTTCTTAGAAAAGAAGATAGAGAGAAAGGGAGAATGTATATTCTGTACTCTATCTTCTCACTTAATCTTCTTGTTCATCATACACTTTCATAGCTCTGATTTAGGCTTGTAAACTTAGATACTAGTACTTAAAATGAAATGTAGCTTAAAAGAATTCAAGGGTTCTTTTCGATTCCTTCTACTTTGATGATTCTTGTTCAAGAGATAGTCTCTGTCTATGTATCAGTCAAATTGTTCTTTTCACTATTTCTATATTTGCTTATCTGCTTTGTTGCAAAATCTTACCTGTTCTATCAGAGATTGTCGTTTGTTTGTCGATCATCAACGTTTTTTTCTTGCACGACCTTACATCTTGGCTCCTCTTGTAGTTCATCTTCCATCTTCTACATTATTTGAAGAGAAGAAGATGGCAAGGGAAATTATAACATGTAATTGTATTCGACTTTGTTTACTTTACCATGCTAGATTCCTTATACACTATTTGTTTAGACTTTTTACTGATAAAGTTCATCTGCTTGGAGTCAGATCATTGAGCC

Coding sequence (CDS)

ATGCTTTTGGAGTTTGATTCTGCGATGGAAACATTGGTGATTGTAGAACAGTACAGAGATGAGTTCTGTTATCGGGTCAAAACTCTAGAATCGGGTCGATTTGGGAATTTGACGATTAAAGATCATAATCGATTGAGTTTTCAACCGGGTACAGGATTTCGCCCACCTCCATTGGAGATTTCTTCAATTCCTGTTTATTGTTTCTCTTCCCCCAAAACACCACCCCCTTCCGCCGCAACAATTCCGATTAGTGGGGAAATTTGTGTTAACGAGAGCATTGATTTTGATGAACATTGCTGTTACAAGAGAATATCATTTCCTGAGCTTTGGGCTGGACCAACTTACTCGAATTCACCCCCTGCAAGTTCATTGCCAATCCCCAAATTTTCAATCCGAGGAAATAGAACAGTTTCACTCGAATTACCCACTAATTCAGTTGAAAAAATTCACCCAATTGTGAAATCTGCACCACCATCCCCAACTAGGGGCTATACTCATCCTTCTTCAAGAGAGCCATTCCATGGTGCTGATTCTGCTACAAGAACACTTAGAAGAATCCTTAACCTTGATGTTAACTCTGAATGA

Protein sequence

MLLEFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNLTIKDHNRLSFQPGTGFRPPPLEISSIPVYCFSSPKTPPPSAATIPISGEICVNESIDFDEHCCYKRISFPELWAGPTYSNSPPASSLPIPKFSIRGNRTVSLELPTNSVEKIHPIVKSAPPSPTRGYTHPSSREPFHGADSATRTLRRILNLDVNSE
Homology
BLAST of Bhi09G000893 vs. TAIR 10
Match: AT4G02715.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 3.9e-25
Identity = 83/210 (39.52%), Postives = 109/210 (51.90%), Query Frame = 0

Query: 9   METLVIVEQYRDEFCYRVKTLESGRFGNL---TIKDHNRLSFQPGTGFRPPPLEISSIP- 68
           METL++  ++RD++ Y  K+L   RF +    T +  N  +FQ G G  P P   SS P 
Sbjct: 1   METLIVAVEHRDQY-YGKKSLGHDRFRSAPSKTFRQINCRTFQSGVGLLPRPKRTSSTPL 60

Query: 69  -------VYCFSSPKTPPP--------SAATIPISGEICVNESI-----DFDEHCCYKRI 128
                  V    SPK+  P        S  T PI    C    I     +F +    + +
Sbjct: 61  TKGALSQVQSPRSPKSVLPVFHHPSVDSGRTSPIPIANCRGSQIRRCSSEFVDK--RRSL 120

Query: 129 SFPELWAGPTYSNSPPASSLPIPKFSIRGNRTVSLELPT-NSVEKIHPIVKSAPPSPTRG 188
           S+ ELWAGPTYSNSPP +S+PIPKFS++  RTVSL  P  +S   I  + KSAP SPT  
Sbjct: 121 SYSELWAGPTYSNSPPPASVPIPKFSLQQKRTVSLTFPAPDSAVDIREVAKSAPVSPT-- 180

Query: 189 YTHPSSREPFHGADSATRTLRRILNLDVNS 194
               S   PF    SAT TLRR+LNL++ +
Sbjct: 181 ---SSGDNPFRSTVSATMTLRRMLNLELET 202

BLAST of Bhi09G000893 vs. ExPASy TrEMBL
Match: A0A0A0K5M6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388310 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.0e-89
Identity = 168/194 (86.60%), Postives = 175/194 (90.21%), Query Frame = 0

Query: 1   MLLEFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNLTIKDHNRLSFQPGTGFRPPPLEI 60
           MLLEF SAMETLVI+EQYRDEFC+R+K LESGRFGNLTIKDHNR        FRP PLEI
Sbjct: 1   MLLEFGSAMETLVIIEQYRDEFCHRIKPLESGRFGNLTIKDHNRFR------FRPTPLEI 60

Query: 61  SSIPVYCFSSPKTPPPSAATIPISGEICVNESIDFDEHCCYKRISFPELWAGPTYSNSPP 120
           SSIPVYCFSSPKT PPS A IPI+ + CVNESIDFD HCCYKR+SFPELWAGPTYSNSPP
Sbjct: 61  SSIPVYCFSSPKT-PPSCAPIPINEKNCVNESIDFDAHCCYKRLSFPELWAGPTYSNSPP 120

Query: 121 ASSLPIPKFSIRGNRTVSLELPTNSVEKIHPIVKSAPPSPTRGYTHPSSREPFHGADSAT 180
           ASSLPIPKFSIRGNRTVSLELPTNSVEKIHPIVKSAPPSPTRG+THPSSREP HGAD AT
Sbjct: 121 ASSLPIPKFSIRGNRTVSLELPTNSVEKIHPIVKSAPPSPTRGHTHPSSREPCHGADCAT 180

Query: 181 RTLRRILNLDVNSE 195
           RTLRRILNLDVNSE
Sbjct: 181 RTLRRILNLDVNSE 187

BLAST of Bhi09G000893 vs. ExPASy TrEMBL
Match: A0A5D3DRH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001460 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.6e-88
Identity = 169/194 (87.11%), Postives = 174/194 (89.69%), Query Frame = 0

Query: 1   MLLEFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNLTIKDHNRLSFQPGTGFRPPPLEI 60
           MLLEF SAMETLVIVEQYRDEFCYRVK LES RFGN+TIKDHNRL       FRP PLEI
Sbjct: 1   MLLEFGSAMETLVIVEQYRDEFCYRVKPLESSRFGNVTIKDHNRLR------FRPTPLEI 60

Query: 61  SSIPVYCFSSPKTPPPSAATIPISGEICVNESIDFDEHCCYKRISFPELWAGPTYSNSPP 120
           SSIPVY FSSPKTPPP  A IPI+G+ICVNESIDFDEHCCYKR+SFPELWAGPTYSNSPP
Sbjct: 61  SSIPVYYFSSPKTPPP-FAPIPINGKICVNESIDFDEHCCYKRLSFPELWAGPTYSNSPP 120

Query: 121 ASSLPIPKFSIRGNRTVSLELPTNSVEKIHPIVKSAPPSPTRGYTHPSSREPFHGADSAT 180
           ASSLPIPKFSIRGNRTVSLE PTNSVEK+H IVKSAPPSPTRG THPSSREP H ADSAT
Sbjct: 121 ASSLPIPKFSIRGNRTVSLESPTNSVEKVHQIVKSAPPSPTRGNTHPSSREPCHCADSAT 180

Query: 181 RTLRRILNLDVNSE 195
           RTLRRILNLDVNSE
Sbjct: 181 RTLRRILNLDVNSE 187

BLAST of Bhi09G000893 vs. ExPASy TrEMBL
Match: A0A1S3BR78 (uncharacterized protein LOC103492654 OS=Cucumis melo OX=3656 GN=LOC103492654 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.1e-87
Identity = 168/194 (86.60%), Postives = 174/194 (89.69%), Query Frame = 0

Query: 1   MLLEFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNLTIKDHNRLSFQPGTGFRPPPLEI 60
           MLLEF SAMETLVIVEQYRDEFCYRVK LES RFGN+TIKDHNRL       FRP PLEI
Sbjct: 1   MLLEFGSAMETLVIVEQYRDEFCYRVKPLESSRFGNVTIKDHNRLR------FRPTPLEI 60

Query: 61  SSIPVYCFSSPKTPPPSAATIPISGEICVNESIDFDEHCCYKRISFPELWAGPTYSNSPP 120
           SSIPVY FSSPKTPPP  A IPI+G+ICV+ESIDFDEHCCYKR+SFPELWAGPTYSNSPP
Sbjct: 61  SSIPVYYFSSPKTPPP-FAPIPINGKICVDESIDFDEHCCYKRLSFPELWAGPTYSNSPP 120

Query: 121 ASSLPIPKFSIRGNRTVSLELPTNSVEKIHPIVKSAPPSPTRGYTHPSSREPFHGADSAT 180
           ASSLPIPKFSIRGNRTVSLE PTNSVEK+H IVKSAPPSPTRG THPSSREP H ADSAT
Sbjct: 121 ASSLPIPKFSIRGNRTVSLESPTNSVEKVHQIVKSAPPSPTRGNTHPSSREPCHCADSAT 180

Query: 181 RTLRRILNLDVNSE 195
           RTLRRILNLDVNSE
Sbjct: 181 RTLRRILNLDVNSE 187

BLAST of Bhi09G000893 vs. ExPASy TrEMBL
Match: A0A6J1GP91 (uncharacterized protein LOC111455884 OS=Cucurbita moschata OX=3662 GN=LOC111455884 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.8e-68
Identity = 148/213 (69.48%), Postives = 161/213 (75.59%), Query Frame = 0

Query: 1   MLLEFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNLTIKDHNRLSFQPGTGFRPPPLEI 60
           MLLEFDSAMETLVIVEQYRDEFCY  KTLES R GNLTIK+  R +      FRP PL+I
Sbjct: 1   MLLEFDSAMETLVIVEQYRDEFCYLAKTLESDRLGNLTIKEGKRKN-----QFRPNPLKI 60

Query: 61  SSIPVYCFSSPKTPPPSA-------------ATIPISGEIC-VNESIDFDEHCCYKRISF 120
           SSIPVY FSSP+TPPPSA             A I I+ EIC   ES +FDEHCCY+R+SF
Sbjct: 61  SSIPVYLFSSPRTPPPSADYNCTPISTISRSAVISINREICRREESNEFDEHCCYERLSF 120

Query: 121 PELWAGPTYSNSPPASSLPIPKFSIRGNRTVSLELPTN----SVEKIHPIVKSAPPSPTR 180
           PELWAGPTYSNSPPASSLP+PKFS+ GNRTVSLE PTN    SVEKIH         PT 
Sbjct: 121 PELWAGPTYSNSPPASSLPMPKFSMPGNRTVSLEFPTNSAAESVEKIH---------PTW 180

Query: 181 G-YTHPSSREPFHGADSATRTLRRILNLDVNSE 195
           G YTHPS+REPFHGADSATRTLRRILNLD++SE
Sbjct: 181 GRYTHPSTREPFHGADSATRTLRRILNLDIDSE 199

BLAST of Bhi09G000893 vs. ExPASy TrEMBL
Match: A0A6J1JND6 (uncharacterized protein LOC111488454 OS=Cucurbita maxima OX=3661 GN=LOC111488454 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.3e-63
Identity = 138/204 (67.65%), Postives = 152/204 (74.51%), Query Frame = 0

Query: 9   METLVIVEQYRDEFCYRVKTLESGRFGNLTIKDHNRLSFQPGTGFRPPPLEISSIPVYCF 68
           METLVIVEQYRDEFC   KTLES R GNLTIK+  R +      FRP PL+ISSIPVY F
Sbjct: 1   METLVIVEQYRDEFCCLAKTLESDRLGNLTIKEGKRKN-----QFRPNPLKISSIPVYLF 60

Query: 69  SSPKTPPPSA-------------ATIPISGEICVNESIDFDEHCCYKRISFPELWAGPTY 128
           SSP+TPPPSA             A I I+GEIC  ES +FDEHCCY+R+SFPELWAGPTY
Sbjct: 61  SSPRTPPPSADYNCTPISTISRSALISINGEICRRESNEFDEHCCYERLSFPELWAGPTY 120

Query: 129 SNSPPASSLPIPKFSIRGNRTVSLELPTN----SVEKIHPIVKSAPPSPTRG-YTHPSSR 188
           SNSPPA+SLP+PKFS+ GNRTVSL+L TN    SVEKIH         PTRG YTHPS  
Sbjct: 121 SNSPPANSLPMPKFSMPGNRTVSLDLHTNSAAESVEKIH---------PTRGRYTHPSKL 180

Query: 189 EPFHGADSATRTLRRILNLDVNSE 195
           EPFHGADSATRTLRRILNLD++SE
Sbjct: 181 EPFHGADSATRTLRRILNLDIDSE 190

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G02715.13.9e-2539.52unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K5M63.0e-8986.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388310 PE=4 SV=1[more]
A0A5D3DRH95.6e-8887.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BR782.1e-8786.60uncharacterized protein LOC103492654 OS=Cucumis melo OX=3656 GN=LOC103492654 PE=... [more]
A0A6J1GP913.8e-6869.48uncharacterized protein LOC111455884 OS=Cucurbita moschata OX=3662 GN=LOC1114558... [more]
A0A6J1JND61.3e-6367.65uncharacterized protein LOC111488454 OS=Cucurbita maxima OX=3661 GN=LOC111488454... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF15365PNRCcoord: 110..129
e-value: 2.1E-6
score: 27.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..179
NoneNo IPR availablePANTHERPTHR35306:SF1BNAA03G57290D PROTEINcoord: 9..193
NoneNo IPR availablePANTHERPTHR35306BNAA03G57290D PROTEINcoord: 9..193

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M000893Bhi09M000893mRNA