Bhi09G000581 (gene) Wax gourd (B227) v1

Overview
NameBhi09G000581
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionDehydrin
Locationchr9: 15569525 .. 15569674 (-)
RNA-Seq ExpressionBhi09G000581
SyntenyBhi09G000581
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGGAAGATGACGGTCATGGAAGGAGGAGGAAGAAGGGGCTGAAGGAGAAAGTAAAGGAAAAGATGCCAAGACATCATCATGAGCCCCAGGCAGTGTCAACCACAACGTCGGGCGGTTTATTCATCGGCCTAGTACGGTGGGCAGCATGA

mRNA sequence

TCGGAAGATGACGGTCATGGAAGGAGGAGGAAGAAGGGGCTGAAGGAGAAAGTAAAGGAAAAGATGCCAAGACATCATCATGAGCCCCAGGCAGTGTCAACCACAACGTCGGGCGGTTTATTCATCGGCCTAGTACGGTGGGCAGCATGA

Coding sequence (CDS)

TCGGAAGATGACGGTCATGGAAGGAGGAGGAAGAAGGGGCTGAAGGAGAAAGTAAAGGAAAAGATGCCAAGACATCATCATGAGCCCCAGGCAGTGTCAACCACAACGTCGGGCGGTTTATTCATCGGCCTAGTACGGTGGGCAGCATGA

Protein sequence

SEDDGHGRRRKKGLKEKVKEKMPRHHHEPQAVSTTTSGGLFIGLVRWAA
Homology
[Close]
BLAST of Bhi09G000581 vs. TAIR 10
Match: AT5G66400.1 (Dehydrin family protein )

HSP 1 Score: 42.0 bits (97), Expect = 1.6e-04
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 0 

Query: 1   SEDDGHGRRRKKGLKEKVKEKMPRHHHEPQAVSTTTSGGLFIG 44
           SEDDG G RRKKG+ +K+KEK+P HH   Q+      GG+  G
Sbjct: 117 SEDDGQGGRRKKGITQKIKEKLPGHH--DQSGQAQAMGGMGSG 157

[Close]
BLAST of Bhi09G000581 vs. TAIR 10
Match: AT5G66400.2 (Dehydrin family protein )

HSP 1 Score: 40.0 bits (92), Expect = 6.2e-04
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0 

Query: 1   SEDDGHGRRRKKGLKEKVKEKMPRHHHEPQAVSTTTSGGLFIG 44
           S DDG G RRKKG+ +K+KEK+P HH   Q+      GG+  G
Sbjct: 116 SSDDGQGGRRKKGITQKIKEKLPGHH--DQSGQAQAMGGMGSG 156

[Close]
BLAST of Bhi09G000581 vs. ExPASy Swiss-Prot
Match: P12950 (Dehydrin DHN1 OS=Zea mays OX=4577 GN=DHN1 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 5.5e-05
Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 1   SEDDGHGRRRKKGLKEKVKEKMPRHHHEPQAVSTTTSG 39
           SEDDG G RRKKG+KEK+KEK+P  H + Q  + TT G
Sbjct: 84  SEDDGMGGRRKKGIKEKIKEKLPGGHKDDQHATATTGG 121

[Close]
BLAST of Bhi09G000581 vs. ExPASy TrEMBL
Match: A0A5D3CYN8 (Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005140 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-08
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 1   SEDDGHGRRRKKGLKEKVKEKMP-RHHHEPQAVSTTTSGG 40
           SEDDGHG RRKKGLKEKVKEK+P RHHHE QAVSTTT GG
Sbjct: 111 SEDDGHGGRRKKGLKEKVKEKLPGRHHHEGQAVSTTTPGG 150

[Close]
BLAST of Bhi09G000581 vs. ExPASy TrEMBL
Match: A0A1S3BTX2 (dehydrin DHN1 OS=Cucumis melo OX=3656 GN=LOC103493214 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-08
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 1   SEDDGHGRRRKKGLKEKVKEKMP-RHHHEPQAVSTTTSGG 40
           SEDDGHG RRKKGLKEKVKEK+P RHHHE QAVSTTT GG
Sbjct: 111 SEDDGHGGRRKKGLKEKVKEKLPGRHHHEGQAVSTTTPGG 150

[Close]
BLAST of Bhi09G000581 vs. ExPASy TrEMBL
Match: A0A0A0KWM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045040 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 9.4e-08
Identity = 34/40 (85.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 1   SEDDGHGRRRKKGLKEKVKEKMPRHH-HEPQAVSTTTSGG 40
           SEDDGHG RRKKGLKEKVKEK+P HH HE QAVSTTT GG
Sbjct: 111 SEDDGHGGRRKKGLKEKVKEKLPGHHRHEEQAVSTTTPGG 150

[Close]
BLAST of Bhi09G000581 vs. ExPASy TrEMBL
Match: A0A6J1J0Z6 (dehydrin DHN1-like OS=Cucurbita maxima OX=3661 GN=LOC111481701 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-06
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 1   SEDDGHGRRRKKGLKEKVKEKMPRHH---HEPQAVSTTTSGG 40
           SEDDGHG RRKKGLKEK+KEK+P HH    +PQA STTT GG
Sbjct: 104 SEDDGHGGRRKKGLKEKIKEKLPGHHDTAQQPQATSTTTPGG 145

[Close]
BLAST of Bhi09G000581 vs. ExPASy TrEMBL
Match: A0A6J1FRT8 (dehydrin Rab16B-like OS=Cucurbita moschata OX=3662 GN=LOC111447593 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.2e-06
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0 

Query: 1   SEDDGHGRRRKKGLKEKVKEKMPRHH---HEPQAVSTTTSGG 40
           SEDDGHG RRKKGLKEK+KEK+P HH    +P A STTT GG
Sbjct: 104 SEDDGHGGRRKKGLKEKIKEKLPGHHDTAQQPHATSTTTPGG 145

The following BLAST results are available for this feature:
BLAST of Bhi09G000581 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G66400.11.6e-0451.16Dehydrin family protein [more]
AT5G66400.26.2e-0448.84Dehydrin family protein [more]
BLAST of Bhi09G000581 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P129505.5e-0560.53Dehydrin DHN1 OS=Zea mays OX=4577 GN=DHN1 PE=1 SV=2[more]
BLAST of Bhi09G000581 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CYN81.9e-0887.50Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005140 ... [more]
A0A1S3BTX21.9e-0887.50dehydrin DHN1 OS=Cucumis melo OX=3656 GN=LOC103493214 PE=3 SV=1[more]
A0A0A0KWM99.4e-0885.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045040 PE=3 SV=1[more]
A0A6J1J0Z61.4e-0673.81dehydrin DHN1-like OS=Cucurbita maxima OX=3661 GN=LOC111481701 PE=3 SV=1[more]
A0A6J1FRT85.2e-0671.43dehydrin Rab16B-like OS=Cucurbita moschata OX=3662 GN=LOC111447593 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000167DehydrinPFAMPF00257Dehydrincoord: 1..36
e-value: 3.0E-12
score: 47.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M000581Bhi09M000581mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009631 cold acclimation
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009414 response to water deprivation
biological_process GO:0009415 response to water
cellular_component GO:0005829 cytosol