Bhi09G000340 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G000340
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	cryptdin protein-related
Location	chr9: 8720195 .. 8721041 (+)
RNA-Seq Expression	Bhi09G000340
Synteny	Bhi09G000340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCAGCTAAATTCTCTCTAACCTCTGTTTTGATGACGGTTCTCGTCTTCACCATGGTTCTCTCTCCCATGACGATTCCAACTGCCAATGCTACCCGTGTGCTTCTACAGCAAAGTAAGTTATGATTTTGTTTGATAACTATTTTTTTTTTGTTTTTGTAAATTAAATCTATAAATAATCACTCACAATTTCTTTTGTATTATGCTTTATCTTTTATTTTAAAAATTCAAATTAAGTTTCGTAAACGGAAAAAATATATATATATATATACTTCTTTTATAAACTACCTATTTTTTTTTTTCTAGAATTTGACTCAGAATTGAAATATCTTATGAGTAAAAAATTAAACTGTGAGAAAACTAAAATAAATATATATATATATATATATAAAGAAGTTACAAGGTTTTTTCAACCTATTAGTATTATAGGATATTTAAAAAGAAAAAAAAAAAAAAAAATAGAGCTGTCTCTTGAAAAAGATACATGTAACTGTGTATATTTGCTTGAAAATTAGCATCAGACCCAAAAATTGGTATAATATAAAACAGAGAAAATGTCATTTTATTTTCGGATCAAGTTAAATTATTTTCTGGCCGAGACATTTTATTTTGAGTCAAAACCATTAGATTAAAAAAGCTTAAGCTTATTGGCTTAGGATAAATTAAATTAAAATTTTCATTTTGAAATTCAAAGAAATTTGAGCTTTCATATTTATATTGTTGAGTTTGGTGACGTAGTTAATAGGCCGCCGATATGCCCGGCCTGCGTGTGCTGCGAGCCAGCACCGGCGGGATCCTGTTGCCGGTGCTGCGCTTCTCCGATCCAGACTTCATCTCAGAACGG

mRNA sequence

ATGGCCTCAGCTAAATTCTCTCTAACCTCTGTTTTGATGACGGTTCTCGTCTTCACCATGGTTCTCTCTCCCATGACGATTCCAACTGCCAATGCTACCCGTGTGCTTCTACAGCAAATTAATAGGCCGCCGATATGCCCGGCCTGCGTGTGCTGCGAGCCAGCACCGGCGGGATCCTGTTGCCGGTGCTGCGCTTCTCCGATCCAGACTTCATCTCAGAACGG

Coding sequence (CDS)

ATGGCCTCAGCTAAATTCTCTCTAACCTCTGTTTTGATGACGGTTCTCGTCTTCACCATGGTTCTCTCTCCCATGACGATTCCAACTGCCAATGCTACCCGTGTGCTTCTACAGCAAATTAATAGGCCGCCGATATGCCCGGCCTGCGTGTGCTGCGAGCCAGCACCGGCGGGATCCTGTTGCCGGTGCTGCGCTTCTCCGATCCAGACTTCATCTCAGAACGG

Protein sequence

MASAKFSLTSVLMTVLVFTMVLSPMTIPTANATRVLLQQINRPPICPACVCCEPAPAGSCCRCCASPIQTSSQN

Homology

[Close]

BLAST of Bhi09G000340 vs. TAIR 10
Match: AT1G51920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 4.0e-10
Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 0


Query: 1  MASAKFSLTSVLMTVLVFTMVLSPMTIPTANATRVLLQQI-NRPPICPACVCCEPAPAGS 60
          MAS     +  L   ++F +++ P++   +NATR+    I +R PICPACVCCEPAP GS
Sbjct: 1  MASFHSGKSIFLKLFVLFLLLVLPLS--QSNATRIPRAPISSRRPICPACVCCEPAPLGS 60

Query: 61 CCRCCASPIQTSSQN 75
          CCRCCASPI T + +
Sbjct: 61 CCRCCASPIVTQTHH 73

[Close]

BLAST of Bhi09G000340 vs. TAIR 10
Match: AT1G51915.1 (cryptdin protein-related )

HSP 1 Score: 45.1 bits (105), Expect = 2.9e-05
Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 1  MASAKFSLTSVLMTVLVFTMVLSPMTIPTANATRVLLQQINR--PPICPACVCCEPAPAG 60
          MA+ +FS  ++L++VLV  +VLSP  I    ATR  L    R    +CP+CVCC PAP G
Sbjct: 1  MATERFS--TMLISVLVLALVLSP--ILPCQATRAHLDAETRMLRRVCPSCVCCAPAPRG 60

Query: 61 SCCRC 64
          +CC C
Sbjct: 61 ACCPC 61

[Close]

BLAST of Bhi09G000340 vs. ExPASy TrEMBL
Match: A0A5A7UWJ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00530 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.6e-25
Identity = 64/74 (86.49%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1  MASAKFSLTSVLMTVLVFTMVLSPMTIPTANATRVLLQQINRPPICPACVCCEPAPAGSC 60
          MA  K  +TSV MTVLVF M+LSPMTIPTA ATRVLLQQ+NRPPICPACVCCEPAPAGSC
Sbjct: 1  MAIPKSPITSVFMTVLVFAMLLSPMTIPTATATRVLLQQLNRPPICPACVCCEPAPAGSC 60

Query: 61 CRCCASPIQTSSQN 75
          CRCCASPIQTSSQN
Sbjct: 61 CRCCASPIQTSSQN 74

[Close]

BLAST of Bhi09G000340 vs. ExPASy TrEMBL
Match: A0A0A0K7Y9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452230 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.5e-25
Identity = 64/74 (86.49%), Postives = 66/74 (89.19%), Query Frame = 0


Query: 1  MASAKFSLTSVLMTVLVFTMVLSPMTIPTANATRVLLQQINRPPICPACVCCEPAPAGSC 60
          MA  K  LTSV +TVLVF MVLSPMT PTA+ATRVLLQQINRPPICPACVCCEP PAGSC
Sbjct: 1  MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC 60

Query: 61 CRCCASPIQTSSQN 75
          CRCCASPIQTSSQN
Sbjct: 61 CRCCASPIQTSSQN 74

[Close]

BLAST of Bhi09G000340 vs. ExPASy TrEMBL
Match: A0A6J1JPW7 (uncharacterized protein LOC111488758 OS=Cucurbita maxima OX=3661 GN=LOC111488758 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-23
Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 6  FSLTSVLMTVLVFTMVLSPMTIPTANATRVLLQQINRPPICPACVCCEPAPAGSCCRCCA 65
          FS  S+ +TVLVF MVLSPMTI TANATR LLQQ+NRPPICPACVCCEPAPAGSCCRCCA
Sbjct: 7  FSPISIFVTVLVFAMVLSPMTISTANATRALLQQVNRPPICPACVCCEPAPAGSCCRCCA 66

Query: 66 SPIQTSSQN 75
          +PIQTSSQN
Sbjct: 67 TPIQTSSQN 75

[Close]

BLAST of Bhi09G000340 vs. ExPASy TrEMBL
Match: A0A6J1GR88 (uncharacterized protein LOC111456398 OS=Cucurbita moschata OX=3662 GN=LOC111456398 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.0e-23
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 5  KFSLTSVLMTVLVFTMVLSPMTIPTANATRVLLQQINRPPICPACVCCEPAPAGSCCRCC 64
          KF+ TS+ +TVLVF MVLSP TI T NATRVLLQQ+NRPPICPACVCCEPAPAGSCCRCC
Sbjct: 6  KFTPTSIFVTVLVFAMVLSPTTISTVNATRVLLQQVNRPPICPACVCCEPAPAGSCCRCC 65

Query: 65 ASPIQTSSQN 75
          A+PIQTSSQ+
Sbjct: 66 ATPIQTSSQS 75

[Close]

BLAST of Bhi09G000340 vs. ExPASy TrEMBL
Match: A0A6J1CSH3 (uncharacterized protein LOC111013890 OS=Momordica charantia OX=3673 GN=LOC111013890 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.2e-16
Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 1  MASAKFSLTSVLMTVLVFTMVLSPMTIPTANATRVLLQQINRPPICPACVCCEPAPAGSC 60
          MA+ KFSL+S+ +TVLVFTMVLSPM I TA ATR+ L Q+ RPPICPACVCC+P P GSC
Sbjct: 5  MAAPKFSLSSIFVTVLVFTMVLSPM-ISTAAATRLPL-QVRRPPICPACVCCKPPPPGSC 64

Query: 61 CR-CCASPIQTSSQN 75
          C+ CCA+PI+TSSQN
Sbjct: 65 CKQCCATPIETSSQN 77

The following BLAST results are available for this feature:

BLAST of Bhi09G000340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51920.1	4.0e-10	49.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G51915.1	2.9e-05	47.69	cryptdin protein-related	[more]

BLAST of Bhi09G000340 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi09G000340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UWJ7	2.6e-25	86.49	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K7Y9	7.5e-25	86.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452230 PE=4 SV=1	[more]
A0A6J1JPW7	3.2e-23	85.51	uncharacterized protein LOC111488758 OS=Cucurbita maxima OX=3661 GN=LOC111488758...	[more]
A0A6J1GR88	7.0e-23	82.86	uncharacterized protein LOC111456398 OS=Cucurbita moschata OX=3662 GN=LOC1114563...	[more]
A0A6J1CSH3	2.2e-16	72.00	uncharacterized protein LOC111013890 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36328	TRANSMEMBRANE PROTEIN	coord: 4..73
None	No IPR available	PANTHER	PTHR36328:SF1	TRANSMEMBRANE PROTEIN	coord: 4..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000340	Bhi09M000340	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division