Bhi09G000261 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G000261
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	ATP synthase subunit beta, chloroplastic
Location	chr9: 6748546 .. 6748997 (-)
RNA-Seq Expression	Bhi09G000261
Synteny	Bhi09G000261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGTAGTTTTTTCTTTCTTTTTTTCTCTTTTGAAAAAACATATTTTATCTTTATATATATTTTATACTATATCCAAAGTTCGAAATATCGATGTCAATGAAAATATCGAGGTCCTGATTTTGTGGAAAGAATCGTTGGTGAAAAACATTATGAAACTGCGCAAAGAGTTAAACAAACCTTACAACGTTACAAAGAACTGCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTTAACCGTAGCACGAGCACGCAAAATTGAGCGTTTCTTATCACAACCTTTTTTCGTAGCAGAAGTATTTACTGGTTCCCCCGGGAAATACGTTGGCCTAGCAGAAACAATTAGAGGGCTCTCGCGTGTCCGGGGTCCGATCAGATCAACCAGCGACTGGTTTACAGAACAAGGAGTTAAGCAAGGGCCAGGAGATTGA

mRNA sequence

ATGATAGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTTAACCGTAGCACGAGCACGCAAAATTGAGCGTTTCTTATCACAACCTTTTTTCGTAGCAGAAGTATTTACTGGTTCCCCCGGGAAATACGTTGGCCTAGCAGAAACAATTAGAGGGCTCTCGCGTGTCCGGGGTCCGATCAGATCAACCAGCGACTGGTTTACAGAACAAGGAGTTAAGCAAGGGCCAGGAGATTGA

Coding sequence (CDS)

ATGATAGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTTAACCGTAGCACGAGCACGCAAAATTGAGCGTTTCTTATCACAACCTTTTTTCGTAGCAGAAGTATTTACTGGTTCCCCCGGGAAATACGTTGGCCTAGCAGAAACAATTAGAGGGCTCTCGCGTGTCCGGGGTCCGATCAGATCAACCAGCGACTGGTTTACAGAACAAGGAGTTAAGCAAGGGCCAGGAGATTGA

Protein sequence

MIDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRVRGPIRSTSDWFTEQGVKQGPGD

Homology

[Close]

BLAST of Bhi09G000261 vs. TAIR 10
Match: ATCG00480.1 (ATP synthase subunit beta )

HSP 1 Score: 109.8 bits (273), Expect = 1.1e-24
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRV 62
           DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRG + +
Sbjct: 403 DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLI 461

[Close]

BLAST of Bhi09G000261 vs. TAIR 10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.2e-18
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETI 56
           DIIAILG+DELSE+D+LTVARARKI+RFLSQPF VAE+FTG+PGKYV L E I
Sbjct: 463 DIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEIFTGAPGKYVDLKENI 515

[Close]

BLAST of Bhi09G000261 vs. TAIR 10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.2e-18
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETI 56
           DIIAILG+DELSE+D+LTVARARKI+RFLSQPF VAE+FTG+PGKYV L E I
Sbjct: 466 DIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEIFTGAPGKYVDLKENI 518

[Close]

BLAST of Bhi09G000261 vs. TAIR 10
Match: AT5G08690.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.2e-18
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETI 56
           DIIAILG+DELSE+D+LTVARARKI+RFLSQPF VAE+FTG+PGKYV L E I
Sbjct: 463 DIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEIFTGAPGKYVDLKENI 515

[Close]

BLAST of Bhi09G000261 vs. ExPASy Swiss-Prot
Match: Q9MRR9 (ATP synthase subunit beta, chloroplastic OS=Brasenia schreberi OX=4424 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.3e-24
Identity = 59/73 (80.82%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRVR 62
           DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRG   + 
Sbjct: 403 DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLI- 462

Query: 63  GPIRSTSDWFTEQ 76
             +    D F EQ
Sbjct: 463 --LSGELDSFPEQ 472

[Close]

BLAST of Bhi09G000261 vs. ExPASy Swiss-Prot
Match: Q8MBF7 (ATP synthase subunit beta, chloroplastic OS=Montinia caryophyllacea OX=23084 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.3e-24
Identity = 59/73 (80.82%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRVR 62
           DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRG   + 
Sbjct: 403 DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLI- 462

Query: 63  GPIRSTSDWFTEQ 76
             +    D F EQ
Sbjct: 463 --LSGELDSFPEQ 472

[Close]

BLAST of Bhi09G000261 vs. ExPASy Swiss-Prot
Match: Q6EW72 (ATP synthase subunit beta, chloroplastic OS=Nymphaea alba OX=34301 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.3e-24
Identity = 59/73 (80.82%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRVR 62
           DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRG   + 
Sbjct: 403 DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLI- 462

Query: 63  GPIRSTSDWFTEQ 76
             +    D F EQ
Sbjct: 463 --LSGELDSFPEQ 472

[Close]

BLAST of Bhi09G000261 vs. ExPASy Swiss-Prot
Match: Q9MU26 (ATP synthase subunit beta, chloroplastic OS=Nymphaea odorata OX=4419 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.3e-24
Identity = 59/73 (80.82%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRVR 62
           DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRG   + 
Sbjct: 403 DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLI- 462

Query: 63  GPIRSTSDWFTEQ 76
             +    D F EQ
Sbjct: 463 --LSGELDSFPEQ 472

[Close]

BLAST of Bhi09G000261 vs. ExPASy Swiss-Prot
Match: P19366 (ATP synthase subunit beta, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=atpB PE=1 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-23
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRV 62
           DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRG + +
Sbjct: 403 DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLI 461

[Close]

BLAST of Bhi09G000261 vs. ExPASy TrEMBL
Match: Q8MBJ5 (ATP synthase subunit beta (Fragment) OS=Petrogenia repens OX=197430 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21
Identity = 59/73 (80.82%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRVR 62
           DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRG   + 
Sbjct: 386 DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLI- 445

Query: 63  GPIRSTSDWFTEQ 76
             +    D F EQ
Sbjct: 446 --LSGELDGFPEQ 455

[Close]

BLAST of Bhi09G000261 vs. ExPASy TrEMBL
Match: A0A6H1XKW4 (ATP synthase subunit beta, chloroplastic OS=Euonymus szechuanensis OX=2726726 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21
Identity = 59/73 (80.82%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRVR 62
           DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRG   + 
Sbjct: 403 DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLI- 462

Query: 63  GPIRSTSDWFTEQ 76
             +    D F EQ
Sbjct: 463 --LSGELDGFPEQ 472

[Close]

BLAST of Bhi09G000261 vs. ExPASy TrEMBL
Match: A0A2H4NVN8 (ATP synthase subunit beta, chloroplastic OS=Lecythis minor OX=372754 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21
Identity = 59/73 (80.82%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRVR 62
           DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRG   + 
Sbjct: 403 DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLI- 462

Query: 63  GPIRSTSDWFTEQ 76
             +    D F EQ
Sbjct: 463 --LSGELDGFPEQ 472

[Close]

BLAST of Bhi09G000261 vs. ExPASy TrEMBL
Match: A0A290Y309 (ATP synthase subunit beta, chloroplastic OS=Euonymus schensianus OX=2039006 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21
Identity = 59/73 (80.82%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRVR 62
           DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRG   + 
Sbjct: 403 DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLI- 462

Query: 63  GPIRSTSDWFTEQ 76
             +    D F EQ
Sbjct: 463 --LSGELDGFPEQ 472

[Close]

BLAST of Bhi09G000261 vs. ExPASy TrEMBL
Match: A0A1C9HC61 (ATP synthase subunit beta (Fragment) OS=Glyptopetalum sp. TY-2016 OX=1898797 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21
Identity = 59/73 (80.82%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3   DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGLSRVR 62
           DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRG   + 
Sbjct: 247 DIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLI- 306

Query: 63  GPIRSTSDWFTEQ 76
             +    D F EQ
Sbjct: 307 --LSGEFDGFPEQ 316

The following BLAST results are available for this feature:

BLAST of Bhi09G000261 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00480.1	1.1e-24	93.22	ATP synthase subunit beta	[more]
AT5G08670.1	1.2e-18	81.13	ATP synthase alpha/beta family protein	[more]
AT5G08680.1	1.2e-18	81.13	ATP synthase alpha/beta family protein	[more]
AT5G08690.1	1.2e-18	81.13	ATP synthase alpha/beta family protein	[more]

BLAST of Bhi09G000261 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MRR9	5.3e-24	80.82	ATP synthase subunit beta, chloroplastic OS=Brasenia schreberi OX=4424 GN=atpB P...	[more]
Q8MBF7	5.3e-24	80.82	ATP synthase subunit beta, chloroplastic OS=Montinia caryophyllacea OX=23084 GN=...	[more]
Q6EW72	5.3e-24	80.82	ATP synthase subunit beta, chloroplastic OS=Nymphaea alba OX=34301 GN=atpB PE=3 ...	[more]
Q9MU26	5.3e-24	80.82	ATP synthase subunit beta, chloroplastic OS=Nymphaea odorata OX=4419 GN=atpB PE=...	[more]
P19366	1.5e-23	93.22	ATP synthase subunit beta, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=atpB...	[more]

BLAST of Bhi09G000261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q8MBJ5	1.5e-21	80.82	ATP synthase subunit beta (Fragment) OS=Petrogenia repens OX=197430 GN=atpB PE=3...	[more]
A0A6H1XKW4	1.5e-21	80.82	ATP synthase subunit beta, chloroplastic OS=Euonymus szechuanensis OX=2726726 GN...	[more]
A0A2H4NVN8	1.5e-21	80.82	ATP synthase subunit beta, chloroplastic OS=Lecythis minor OX=372754 GN=atpB PE=...	[more]
A0A290Y309	1.5e-21	80.82	ATP synthase subunit beta, chloroplastic OS=Euonymus schensianus OX=2039006 GN=a...	[more]
A0A1C9HC61	1.5e-21	80.82	ATP synthase subunit beta (Fragment) OS=Glyptopetalum sp. TY-2016 OX=1898797 GN=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024034	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal	GENE3D	1.10.1140.10		coord: 1..74 e-value: 3.9E-29 score: 102.7
None	No IPR available	PANTHER	PTHR15184	ATP SYNTHASE	coord: 2..61
None	No IPR available	PANTHER	PTHR15184:SF65	F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT	coord: 2..61
None	No IPR available	SUPERFAMILY	47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase	coord: 3..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000261	Bhi09M000261	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism