Bhi09G000172 (gene) Wax gourd (B227) v1

Overview
NameBhi09G000172
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionGolgin family A protein
Locationchr9: 4762337 .. 4764012 (-)
RNA-Seq ExpressionBhi09G000172
SyntenyBhi09G000172
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAGTAGAGAAGAAAGAAAGAAACCTGGATGGAGTTAGTATTAGACTTTATTTTCAAAAGCAAAAAATAAAAAATCAGATGGCCTTAATAATTTAGGTTGGGTGGGTGTGGGTGTGGTTTGTGGATTGATAGTTGAGAGTCGCCATGGTTTGCATTCTTGCTGGTTCCACGGGTTTATGTTTGCAGGGAAAGACGTTGGCGGCGGTATGTATGTGGAGAAGGCGAAGTGATGGGATTAGGAACAAGATTAGGAGTGAAGCAGAAGGAGAAAACGAAAATACGGTTCCAGGCAGAGACCGAGTGATGGGGTTTGGAAAGCACAAGGGCAAAATGCTCGGAACCCTACCTTCAACCTACCTGAAATGGGTTTCCAAAAATCTAAGAGCAAGGGAGTTTGAAGAATGGGCGATTTTGGCAGACCAAGTTCTCGAAGACCCGGTTTACCAAGACCGGATCCAGTGGGAGTTCGCCCACAACATTCTGACCGGTGCCGGTCGGACTGGCCGTGACGATGTCGTTTCTGAGCTGTTGGAGATCAGTGACAGATTTGGCTGGGATTGGGAGAATAAGTCCGGTTGGAGAGATGTGGAGTTTGAGCTTCTGGGGACTTCGAAAGGTGGAAGGATCCCGCGACGAATCGAATCAACTCAGAAGTCGGAATCGAAGACGACGGATAATGTATCATCATGCGCCGGCGGTGGTGGCGGTGGAAGAAGGAGGGAGAGAAGAAATCGGTTGAGAGTGAAGCGAGAGAAATCGAAGGGAGCCGAGGAGAAAAGTGAAGTGAAAACGGAAACTGAGAATCCCACTCCCAGGTTTAATAATCCCTTCCCTGGCCGTCAAACTCTTCTAAACCGGTTTACCACAACCAAATCACATTTATTTATTAAAAAGGATCCCAATTCATAAGGCAACGCAACTGTATGCATGGAGTTATGATGTGAAGTTGAATTCATGGAGTTCTGAAATTTGGAACTCTTAAGGCTAAGGAATTAATATATATATATATTTTTTTTTTATTGACTCACAAACTCCAGTAAAAAAAGTCGGTAGAAAAAATAGTGTTCAATCACTCACTCTTCAGGTCAAACATCCTTAGAAACTATTACATAGATCATAAGGATCATAGTTTTTTATTTTCCTTTTATTGAATCTCGATATATTTTGTTTTAGCTTAATCACCGAGAAAATTGCACAAAAAATTCATTTTAAATATTTTAAAGGCCGAAAATGGCAAGGACTTGATGATCTTGTAAATTTACAATATTGTCTTTGTTTTTTCTTTCTTCACCAACTCCTTTCCCCTTTCTTTTTTCCTTTTTCTTTTTCCTCTTTCTTTCTCCCTCTCTGCGCGTCGTCTCTTCTTCTCTGATCATTTTCTTTTGTGCATTTTCTTTTTCTTCTCTGAAATGGTGAGTTCACACGAGCAGTTCCAACACGACCAACTCCGATGAACAACAGCAAGAATGAGAGAGAAGAGTGATTTTGTGAGTTAGAAAAAGAAGAACAATACCGACGAAAGGATGACCGACGAGAGCGAAACAAACATGAGGGGAAGAAGGCGACTCATTATTCCATGGATGTTCGCAAATGGATCATCTACATGAGGTAGAGTAAGAACGAGAGTGAGCGAATGCTTTTCCACGTGCACGTAAATATATTTTAGTGATTCAC

mRNA sequence

AAAGAGTAGAGAAGAAAGAAAGAAACCTGGATGGAGTTAGTATTAGACTTTATTTTCAAAAGCAAAAAATAAAAAATCAGATGGCCTTAATAATTTAGGTTGGGTGGGTGTGGGTGTGGTTTGTGGATTGATAGTTGAGAGTCGCCATGGTTTGCATTCTTGCTGGTTCCACGGGTTTATGTTTGCAGGGAAAGACGTTGGCGGCGGTATGTATGTGGAGAAGGCGAAGTGATGGGATTAGGAACAAGATTAGGAGTGAAGCAGAAGGAGAAAACGAAAATACGGTTCCAGGCAGAGACCGAGTGATGGGGTTTGGAAAGCACAAGGGCAAAATGCTCGGAACCCTACCTTCAACCTACCTGAAATGGGTTTCCAAAAATCTAAGAGCAAGGGAGTTTGAAGAATGGGCGATTTTGGCAGACCAAGTTCTCGAAGACCCGGTTTACCAAGACCGGATCCAGTGGGAGTTCGCCCACAACATTCTGACCGGTGCCGGTCGGACTGGCCGTGACGATGTCGTTTCTGAGCTGTTGGAGATCAGTGACAGATTTGGCTGGGATTGGGAGAATAAGTCCGGTTGGAGAGATGTGGAGTTTGAGCTTCTGGGGACTTCGAAAGGTGGAAGGATCCCGCGACGAATCGAATCAACTCAGAAGTCGGAATCGAAGACGACGGATAATGTATCATCATGCGCCGGCGGTGGTGGCGGTGGAAGAAGGAGGGAGAGAAGAAATCGGTTGAGAGTGAAGCGAGAGAAATCGAAGGGAGCCGAGGAGAAAAGTGAAGTGAAAACGGAAACTGAGAATCCCACTCCCAGTTCCAACACGACCAACTCCGATGAACAACAGCAAGAATGAGAGAGAAGAGTGATTTTGTGAGTTAGAAAAAGAAGAACAATACCGACGAAAGGATGACCGACGAGAGCGAAACAAACATGAGGGGAAGAAGGCGACTCATTATTCCATGGATGTTCGCAAATGGATCATCTACATGAGGTAGAGTAAGAACGAGAGTGAGCGAATGCTTTTCCACGTGCACGTAAATATATTTTAGTGATTCAC

Coding sequence (CDS)

ATGGTTTGCATTCTTGCTGGTTCCACGGGTTTATGTTTGCAGGGAAAGACGTTGGCGGCGGTATGTATGTGGAGAAGGCGAAGTGATGGGATTAGGAACAAGATTAGGAGTGAAGCAGAAGGAGAAAACGAAAATACGGTTCCAGGCAGAGACCGAGTGATGGGGTTTGGAAAGCACAAGGGCAAAATGCTCGGAACCCTACCTTCAACCTACCTGAAATGGGTTTCCAAAAATCTAAGAGCAAGGGAGTTTGAAGAATGGGCGATTTTGGCAGACCAAGTTCTCGAAGACCCGGTTTACCAAGACCGGATCCAGTGGGAGTTCGCCCACAACATTCTGACCGGTGCCGGTCGGACTGGCCGTGACGATGTCGTTTCTGAGCTGTTGGAGATCAGTGACAGATTTGGCTGGGATTGGGAGAATAAGTCCGGTTGGAGAGATGTGGAGTTTGAGCTTCTGGGGACTTCGAAAGGTGGAAGGATCCCGCGACGAATCGAATCAACTCAGAAGTCGGAATCGAAGACGACGGATAATGTATCATCATGCGCCGGCGGTGGTGGCGGTGGAAGAAGGAGGGAGAGAAGAAATCGGTTGAGAGTGAAGCGAGAGAAATCGAAGGGAGCCGAGGAGAAAAGTGAAGTGAAAACGGAAACTGAGAATCCCACTCCCAGTTCCAACACGACCAACTCCGATGAACAACAGCAAGAATGA

Protein sequence

MVCILAGSTGLCLQGKTLAAVCMWRRRSDGIRNKIRSEAEGENENTVPGRDRVMGFGKHKGKMLGTLPSTYLKWVSKNLRAREFEEWAILADQVLEDPVYQDRIQWEFAHNILTGAGRTGRDDVVSELLEISDRFGWDWENKSGWRDVEFELLGTSKGGRIPRRIESTQKSESKTTDNVSSCAGGGGGGRRRERRNRLRVKREKSKGAEEKSEVKTETENPTPSSNTTNSDEQQQE
Homology
BLAST of Bhi09G000172 vs. TAIR 10
Match: AT1G51080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 162.9 bits (411), Expect = 3.1e-40
Identity = 100/199 (50.25%), Postives = 120/199 (60.30%), Query Frame = 0

Query: 46  TVPGRDRVMGFGKHKGKMLGTLPSTYLKWVSKNLRAREFEEWAILADQVLEDPVYQDRIQ 105
           T+  RD ++ FGKHKGKMLGTLPS+YLKWVSKNLRA  FE WA LAD+VLED VY+DR +
Sbjct: 60  TLAARDTIIDFGKHKGKMLGTLPSSYLKWVSKNLRAGVFEYWAKLADEVLEDDVYKDRTE 119

Query: 106 WEFAHNILTGAG---------RTGRDDV--VSELLEISDRFGWDWENKSGWRDVEFELLG 165
           WEFA  IL G+          R  R++V  VS LLEIS+RFGWD E+K GW  + FELLG
Sbjct: 120 WEFAEKILHGSDESMRALTSVRKSREEVNSVSMLLEISERFGWDNEDKIGWSKINFELLG 179

Query: 166 TSKGGRIPR----------RIESTQKSESKTTDNVSSCAGGGGGGRRRERRNRLR----- 214
           TSKGGRIPR          R E  ++ E K  +          G RR++RR R+R     
Sbjct: 180 TSKGGRIPRLRKANEEEEERGEMVRRREIKKKEEEED----ENGWRRKQRRERMRQSLGR 239

BLAST of Bhi09G000172 vs. ExPASy TrEMBL
Match: A0A1S3CGX9 (uncharacterized protein LOC103500617 OS=Cucumis melo OX=3656 GN=LOC103500617 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.4e-93
Identity = 182/226 (80.53%), Postives = 194/226 (85.84%), Query Frame = 0

Query: 1   MVCILAGSTGLCLQGKTLAAVCMWRRRSDGIRNKIRSEAEGENENTVPGRDRVMGFGKHK 60
           MV + AGST LCL G   AA C+WRRRS G  N IRSEAEG  +N +PGRDRV+GFGKHK
Sbjct: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRG--NTIRSEAEG--QNPIPGRDRVIGFGKHK 60

Query: 61  GKMLGTLPSTYLKWVSKNLRAREFEEWAILADQVLEDPVYQDRIQWEFAHNILTGAGRTG 120
           GKMLGTLPSTYLKW+SKNLRAREFEEWAILADQVLEDPVYQDR+QWEFAHN+LTGAGR+G
Sbjct: 61  GKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPVYQDRVQWEFAHNVLTGAGRSG 120

Query: 121 RDDVVSELLEISDRFGWDWENKSGWRDVEFELLGTSKGGRIPRRIESTQKSESKTTDNVS 180
           RDDVVSEL EISDRFGWDW+NKSGWRDV+FELLGTSKGGRIPRRIE TQ SE KT  NVS
Sbjct: 121 RDDVVSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVS 180

Query: 181 SCAGGGGGGRRRERRNRLRVKREKSKGAEEKSEVKTETENPTPSSN 227
              GGGGGGRRRERR+RLR KREKSKG  EKSE KTE ENP P  N
Sbjct: 181 ---GGGGGGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFN 219

BLAST of Bhi09G000172 vs. ExPASy TrEMBL
Match: A0A5D3BWA7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001890 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.1e-93
Identity = 181/226 (80.09%), Postives = 193/226 (85.40%), Query Frame = 0

Query: 1   MVCILAGSTGLCLQGKTLAAVCMWRRRSDGIRNKIRSEAEGENENTVPGRDRVMGFGKHK 60
           MV + AGST LCL G   AA C+WRRRS G  N IRSEAEG  +N +PGRDRV+GFGKHK
Sbjct: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRG--NTIRSEAEG--QNPIPGRDRVIGFGKHK 60

Query: 61  GKMLGTLPSTYLKWVSKNLRAREFEEWAILADQVLEDPVYQDRIQWEFAHNILTGAGRTG 120
           GKMLGTLPSTYLKW+SKNLRAREFEEWA LADQVLEDPVYQDR+QWEFAHN+LTGAGR+G
Sbjct: 61  GKMLGTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSG 120

Query: 121 RDDVVSELLEISDRFGWDWENKSGWRDVEFELLGTSKGGRIPRRIESTQKSESKTTDNVS 180
           RDDVVSEL EISDRFGWDW+NKSGWRDV+FELLGTSKGGRIPRRIE TQ SE KT  NVS
Sbjct: 121 RDDVVSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVS 180

Query: 181 SCAGGGGGGRRRERRNRLRVKREKSKGAEEKSEVKTETENPTPSSN 227
              GGGGGGRRRERR+RLR KREKSKG  EKSE KTE ENP P  N
Sbjct: 181 ---GGGGGGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFN 219

BLAST of Bhi09G000172 vs. ExPASy TrEMBL
Match: A0A0A0K7H6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447750 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.6e-92
Identity = 181/226 (80.09%), Postives = 194/226 (85.84%), Query Frame = 0

Query: 1   MVCILAGSTGLCLQGKTLAAVCMWRRRSDGIRNKIRSEAEGENENTVPGRDRVMGFGKHK 60
           MV + AGST LCL G  LAA C+ RRRS GI   IRSEAEG  +N VPGRDRV+GFGKHK
Sbjct: 15  MVVVFAGSTSLCLPGNALAAACVRRRRSQGI--TIRSEAEG--KNPVPGRDRVIGFGKHK 74

Query: 61  GKMLGTLPSTYLKWVSKNLRAREFEEWAILADQVLEDPVYQDRIQWEFAHNILTGAGRTG 120
           GKMLGTLPSTYLKW+SKNLRAREFEEWAILADQVLEDP+YQDR+QWEFAHN+LTGAGR+G
Sbjct: 75  GKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVLTGAGRSG 134

Query: 121 RDDVVSELLEISDRFGWDWENKSGWRDVEFELLGTSKGGRIPRRIESTQKSESKTTDNVS 180
           RD+VVSEL EISDRFGWDW+NKSGWR V+FELLGTSKGGRIPRRIE TQKSESKT  NVS
Sbjct: 135 RDNVVSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVS 194

Query: 181 SCAGGGGGGRRRERRNRLRVKREKSKGAEEKSEVKTETENPTPSSN 227
              GGGGGGRRRERR+RLR KREKS G  EKSE KTE ENP P  N
Sbjct: 195 G-GGGGGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFN 235

BLAST of Bhi09G000172 vs. ExPASy TrEMBL
Match: A0A6J1JVI9 (uncharacterized protein LOC111488702 OS=Cucurbita maxima OX=3661 GN=LOC111488702 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.1e-69
Identity = 151/223 (67.71%), Postives = 163/223 (73.09%), Query Frame = 0

Query: 11  LCLQGKTLAAVCMWRRRSDGIRNKIRSEAEGENENTVPGRDRVMGFGKHKGKMLGTLPST 70
           LCLQ K L  VC WR   DGIRN+          N +P RDRV+GFG+HKGKMLG LPS+
Sbjct: 3   LCLQAKAL-PVCAWRSDGDGIRNR-----APPTPNPIPPRDRVIGFGRHKGKMLGALPSS 62

Query: 71  YLKWVSKNLRAREFEEWAILADQVLEDPVYQDRIQWEFAHNIL---TGAGRTGRDDVVSE 130
           YLKW+SKNLRAR+ EEWAILADQVLEDPVYQDRIQWEFAHN+L   TG G T RD VVSE
Sbjct: 63  YLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGTGRGGTARDGVVSE 122

Query: 131 LLEISDRFGWDWENKSGWRDVEFELLGTSKGGRIPRRIESTQKSESKTTDNVSSCAGGGG 190
           LLEISDRFGWDW+   GWRDV FELLGTSKGGRIPRR E        T   VS   GGGG
Sbjct: 123 LLEISDRFGWDWDG-GGWRDVNFELLGTSKGGRIPRRAE-------PTAQKVSPGGGGGG 182

Query: 191 GGRRRERRNRLRVKREKSKGAEEKSEVKTETEN-PTPSSNTTN 230
           GGRR ERRNRLRVKREKSKG  E+SE+K E    PTP +   N
Sbjct: 183 GGRRSERRNRLRVKREKSKGVVERSEMKAENNPLPTPKAQPDN 211

BLAST of Bhi09G000172 vs. ExPASy TrEMBL
Match: A0A6J1GQE9 (uncharacterized protein LOC111456149 OS=Cucurbita moschata OX=3662 GN=LOC111456149 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 7.4e-66
Identity = 150/228 (65.79%), Postives = 168/228 (73.68%), Query Frame = 0

Query: 11  LCLQGKTLAAVCMWRRRSDGIRNKIRSEAEGENENTVPGRDRVMGFGKHKGKMLGTLPST 70
           LCLQ K L  VC W  RSDGIRN+        + N +P RDRV+GFG+HKGKMLG LPS+
Sbjct: 3   LCLQAKAL-PVCAW--RSDGIRNR-----AAPSPNPIPPRDRVIGFGRHKGKMLGALPSS 62

Query: 71  YLKWVSKNLRAREFEEWAILADQVLEDPVYQDRIQWEFAHNILTGA-GR--TGRDDVVSE 130
           YLKW+SKNLRAR+ EEWAILADQVLEDPVYQDRIQWEFAHN+L+G  GR  TGRD VVSE
Sbjct: 63  YLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDGRRGTGRDGVVSE 122

Query: 131 LLEISDRFGWDWE---NKSGWRDVEFELLGTSKGGRIPRRIESTQKSESKTTDNVSSCAG 190
           LLEISDRFGWDW+   +  GWRDV FELLGTSKGGRIPRR + T +  S          G
Sbjct: 123 LLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSP-----GGGGG 182

Query: 191 GGGGGRRRERRNRLRVKREKSKGAEEKSEVKTETEN---PTPSSNTTN 230
            GGGG+R ERR+RLRVKREKSKG  E+SE  TE EN   PTP +   N
Sbjct: 183 SGGGGKRSERRDRLRVKREKSKGVVERSE--TEVENNPLPTPKAQPDN 215

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G51080.13.1e-4050.25unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CGX91.4e-9380.53uncharacterized protein LOC103500617 OS=Cucumis melo OX=3656 GN=LOC103500617 PE=... [more]
A0A5D3BWA77.1e-9380.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K7H61.6e-9280.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447750 PE=4 SV=1[more]
A0A6J1JVI91.1e-6967.71uncharacterized protein LOC111488702 OS=Cucurbita maxima OX=3661 GN=LOC111488702... [more]
A0A6J1GQE97.4e-6665.79uncharacterized protein LOC111456149 OS=Cucurbita moschata OX=3662 GN=LOC1114561... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024530Putative quorum-sensing-regulated virulence factorPFAMPF12843QSregVF_bcoord: 53..77
e-value: 9.5E-5
score: 22.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..236
NoneNo IPR availablePANTHERPTHR38357EXPRESSED PROTEINcoord: 28..230

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M000172Bhi09M000172mRNA