Bhi09G000074 (gene) Wax gourd (B227) v1

Overview
NameBhi09G000074
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionneurogenic locus notch homolog protein 3-like
Locationchr9: 1849937 .. 1851158 (-)
RNA-Seq ExpressionBhi09G000074
SyntenyBhi09G000074
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGGCGTCAGTCTCTGCATCCTCATTCTCATTTCTTTTCAGTTCTTCCTTGCAACCAGTGGAATTCTGAACTCTTCAGCATCACAAGGTACCAATTTAAATCCTTTTTCTATGAGTTTGTCTGTACCGGGTCTAGTTATGCTTTTAGCTTTTGCTTTTGTTCATTTTTTTGGGTTGGTTAGGGAGGTTTAATTTTATTTTAAATATTCTGATTTTATTTGCAGGTACTGCCGTGTGCTCAGTCATAAATTGTGGGCAAGGAACTTGCAAGGCATCTAATGCATCATTTCTTGGTTTCGATTGTGAGTGTAACTTTGGTTGGAGGAAACGCCAGATTGGTTTGTTCACCTTCCCCTATTGTGTTCTTCCCAACGGTAAGAATCTCTTTCTGCCTACACAAACACACAACTACAGATTGTACTATATATTAACCGTATTCAATACATATATATGGTAATAACGTAATATGCCTCCTTATTTTGATGGTTTTGATTTATCTCCATCTAGTTTAATTCTACTAATTGAATTGCATAAAATATAACGGTGCCTAGAATTTAGAGGTAAAAGGTATTGAATCGAGTCTTGAATAAGAAAAATTGCTATACAGTTTAGTAAAATTCTTAAATCAATGTGGATTAGATTGGTTCTTACCTTTAATAAAGATATCTGCACCATTGAGAGAATAGGATACATGCCAATGCTAAGACTTGCAGGAATATGAACGAGAAGGAATCACCATTTTTTGAAGAAATTAACTTAATTTATTTCTAAATTGCTTAATGGTATAGTGTACGACTATTATTTGTCAATACATTAAGTTCATGGGTGTAAAGAATAATTTGCGTCGGGAATGCACCAACTGTCTTTTCTCATGGTGGGCGTGTCCAGTTTCTCTGTATTAAAATAAAATATAAAGAGCACAACAAAGATTGTGAAAAATAAAGTTAGCTATAATATGGAACAAATTACGGGTCTCATCACTTCTCTGCTGCGTGTACTTACAATTATTTTAATAATGCTCACTAGGTAACAACTTTCAGACAAGTTGGGGAGAGGAAAAATAATTTTTTATGGGAAAATAGATAATTAGAGTTATATGAATAGTTACTGAACTTTCAGGCACTGCCGAATTCCAAAGTGGCGGTGGATCTCCACTTCCACCTCTACTGCCACCAACAACGGTGGTTCCTTCATACACCTTTTGTATTCTCAAACT

mRNA sequence

ATGGAAGAAGGCGTCAGTCTCTGCATCCTCATTCTCATTTCTTTTCAGTTCTTCCTTGCAACCAGTGGAATTCTGAACTCTTCAGCATCACAAGGTACTGCCGTGTGCTCAGTCATAAATTGTGGGCAAGGAACTTGCAAGGCATCTAATGCATCATTTCTTGGTTTCGATTGTGAGTGTAACTTTGGTTGGAGGAAACGCCAGATTGGTTTGTTCACCTTCCCCTATTGTGTTCTTCCCAACGGCACTGCCGAATTCCAAAGTGGCGGTGGATCTCCACTTCCACCTCTACTGCCACCAACAACGGTGGTTCCTTCATACACCTTTTGTATTCTCAAACT

Coding sequence (CDS)

ATGGAAGAAGGCGTCAGTCTCTGCATCCTCATTCTCATTTCTTTTCAGTTCTTCCTTGCAACCAGTGGAATTCTGAACTCTTCAGCATCACAAGGTACTGCCGTGTGCTCAGTCATAAATTGTGGGCAAGGAACTTGCAAGGCATCTAATGCATCATTTCTTGGTTTCGATTGTGAGTGTAACTTTGGTTGGAGGAAACGCCAGATTGGTTTGTTCACCTTCCCCTATTGTGTTCTTCCCAACGGCACTGCCGAATTCCAAAGTGGCGGTGGATCTCCACTTCCACCTCTACTGCCACCAACAACGGTGGTTCCTTCATACACCTTTTGTATTCTCAAACT

Protein sequence

MEEGVSLCILILISFQFFLATSGILNSSASQGTAVCSVINCGQGTCKASNASFLGFDCECNFGWRKRQIGLFTFPYCVLPNGTAEFQSGGGSPLPPLLPPTTVVPSYTFCILK
Homology
BLAST of Bhi09G000074 vs. TAIR 10
Match: AT4G14746.1 (CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 4.8e-07
Identity = 28/75 (37.33%), Postives = 41/75 (54.67%), Query Frame = 0

Query: 35  VCSVINCGQGTCKA-SNASFLGFDCECNFGWRKRQIGLFTFPYCVLPNGTAEFQSG-GGS 94
           +C  + CG+G CKA SN +F+ ++CEC  GW++    L   P C+ PN T +   G   S
Sbjct: 38  ICKEVECGKGKCKAPSNTTFM-YECECEDGWKQFDQHLKFLP-CITPNCTFDLTCGEAAS 97

Query: 95  PLPPLLPPTTVVPSY 108
           P  P  PP   + S+
Sbjct: 98  PAQPKPPPKDNITSF 110

BLAST of Bhi09G000074 vs. ExPASy TrEMBL
Match: A0A6J1CVF7 (uncharacterized protein LOC111014937 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014937 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.0e-33
Identity = 79/109 (72.48%), Postives = 85/109 (77.98%), Query Frame = 0

Query: 1   MEEGVSLCILILISFQFFLATSGILNSS----ASQGTAVCSVINCGQGTCKASNASFLGF 60
           ME+  +  ILILIS QFFLATS  LNSS    +S    VCSVINCGQGTCKASNASFLGF
Sbjct: 1   MEDEFNFYILILISLQFFLATSRTLNSSQELVSSSSQGVCSVINCGQGTCKASNASFLGF 60

Query: 61  DCECNFGWRKRQIGLFTFPYCVLPNGTAEFQSGGGSPLPPLLPPTTVVP 106
           DCECN GWR+ QIG FTFP CVLPN   +F+ GGGSPLPP LPPTTVVP
Sbjct: 61  DCECNSGWRRLQIGSFTFP-CVLPNWIPDFRRGGGSPLPPPLPPTTVVP 108

BLAST of Bhi09G000074 vs. ExPASy TrEMBL
Match: A0A6J1CW51 (uncharacterized protein LOC111014937 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014937 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.0e-33
Identity = 79/109 (72.48%), Postives = 85/109 (77.98%), Query Frame = 0

Query: 1   MEEGVSLCILILISFQFFLATSGILNSS----ASQGTAVCSVINCGQGTCKASNASFLGF 60
           ME+  +  ILILIS QFFLATS  LNSS    +S    VCSVINCGQGTCKASNASFLGF
Sbjct: 1   MEDEFNFYILILISLQFFLATSRTLNSSQELVSSSSQGVCSVINCGQGTCKASNASFLGF 60

Query: 61  DCECNFGWRKRQIGLFTFPYCVLPNGTAEFQSGGGSPLPPLLPPTTVVP 106
           DCECN GWR+ QIG FTFP CVLPN   +F+ GGGSPLPP LPPTTVVP
Sbjct: 61  DCECNSGWRRLQIGSFTFP-CVLPNWIPDFRRGGGSPLPPPLPPTTVVP 108

BLAST of Bhi09G000074 vs. ExPASy TrEMBL
Match: A0A0B0MR48 (Teneurin-4 OS=Gossypium arboreum OX=29729 GN=F383_02948 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.5e-19
Identity = 51/90 (56.67%), Postives = 63/90 (70.00%), Query Frame = 0

Query: 17  FFLATSGILNSSASQGTA------VCSVINCGQGTCKASNASFLGFDCECNFGWRKRQIG 76
           F+LATS  + +++S  T+       CSVI+CGQGTC+ASN S LGFDC C  GW+K QIG
Sbjct: 76  FYLATSTTVTTTSSHVTSNPLQGVFCSVIDCGQGTCQASNNSLLGFDCLCKPGWKKIQIG 135

Query: 77  LFTFPYCVLPNGTAEFQSGGGSPLPPLLPP 101
            FTFP C++PN T +F  G GSP PP LPP
Sbjct: 136 PFTFPSCLVPNCTIDFDCGKGSPPPPSLPP 165

BLAST of Bhi09G000074 vs. ExPASy TrEMBL
Match: A0A6P4LJN4 (uncharacterized protein LOC108452298 OS=Gossypium arboreum OX=29729 GN=LOC108452298 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.5e-19
Identity = 51/90 (56.67%), Postives = 63/90 (70.00%), Query Frame = 0

Query: 17  FFLATSGILNSSASQGTA------VCSVINCGQGTCKASNASFLGFDCECNFGWRKRQIG 76
           F+LATS  + +++S  T+       CSVI+CGQGTC+ASN S LGFDC C  GW+K QIG
Sbjct: 19  FYLATSTTVTTTSSHVTSNPLQGVFCSVIDCGQGTCQASNNSLLGFDCLCKPGWKKIQIG 78

Query: 77  LFTFPYCVLPNGTAEFQSGGGSPLPPLLPP 101
            FTFP C++PN T +F  G GSP PP LPP
Sbjct: 79  PFTFPSCLVPNCTIDFDCGKGSPPPPSLPP 108

BLAST of Bhi09G000074 vs. ExPASy TrEMBL
Match: A0A5D2QE67 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A05G135800v1 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 7.2e-19
Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = 0

Query: 17  FFLATSGILNSSASQGT------AVCSVINCGQGTCKASNASFLGFDCECNFGWRKRQIG 76
           F+LATS  + +++S  T        CSVI+CGQGTC+ASN S LGFDC C  GW+K QIG
Sbjct: 76  FYLATSTTVTTTSSHVTLNPLQGVFCSVIDCGQGTCQASNNSLLGFDCLCKPGWKKIQIG 135

Query: 77  LFTFPYCVLPNGTAEFQSGGGSPLPPLLPP 101
            FTFP C++PN T +F  G GSP PP LPP
Sbjct: 136 PFTFPSCLVPNCTIDFDCGKGSPPPPSLPP 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G14746.14.8e-0737.33CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CVF73.0e-3372.48uncharacterized protein LOC111014937 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CW513.0e-3372.48uncharacterized protein LOC111014937 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A0B0MR485.5e-1956.67Teneurin-4 OS=Gossypium arboreum OX=29729 GN=F383_02948 PE=4 SV=1[more]
A0A6P4LJN45.5e-1956.67uncharacterized protein LOC108452298 OS=Gossypium arboreum OX=29729 GN=LOC108452... [more]
A0A5D2QE677.2e-1956.67Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A05G135800v1 P... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33881NEUROGENIC LOCUS NOTCH-LIKE PROTEINcoord: 8..101
NoneNo IPR availablePANTHERPTHR33881:SF13NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 3-LIKEcoord: 8..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M000074Bhi09M000074mRNA