Bhi09G000061 (gene) Wax gourd (B227) v1

Overview
NameBhi09G000061
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionConserved oligomeric Golgi complex subunit 5
Locationchr9: 1299634 .. 1299831 (+)
RNA-Seq ExpressionBhi09G000061
SyntenyBhi09G000061
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTTAGGGACCTTGCTTCTCCATCTACTGACGAATCGGAGAATCTGGATCTTGACCTTGCAGACATTGATGTCGTTGATGAGGAGTTGAAATGGGTTAAAGAAATTGGGGATAAATTGAGAAGTGAGGCTATGAAGGTTTTGGAGAGAGGAACGAAGGGTCTAAATCAAGCTGAGATGGGAACTGGTTTGTAG

mRNA sequence

ATGAAGCTTAGGGACCTTGCTTCTCCATCTACTGACGAATCGGAGAATCTGGATCTTGACCTTGCAGACATTGATGTCGTTGATGAGGAGTTGAAATGGGTTAAAGAAATTGGGGATAAATTGAGAAGTGAGGCTATGAAGGTTTTGGAGAGAGGAACGAAGGGTCTAAATCAAGCTGAGATGGGAACTGGTTTGTAG

Coding sequence (CDS)

ATGAAGCTTAGGGACCTTGCTTCTCCATCTACTGACGAATCGGAGAATCTGGATCTTGACCTTGCAGACATTGATGTCGTTGATGAGGAGTTGAAATGGGTTAAAGAAATTGGGGATAAATTGAGAAGTGAGGCTATGAAGGTTTTGGAGAGAGGAACGAAGGGTCTAAATCAAGCTGAGATGGGAACTGGTTTGTAG

Protein sequence

MKLRDLASPSTDESENLDLDLADIDVVDEELKWVKEIGDKLRSEAMKVLERGTKGLNQAEMGTGL
Homology
[Close]
BLAST of Bhi09G000061 vs. TAIR 10
Match: AT1G67930.1 (Golgi transport complex protein-related )

HSP 1 Score: 72.0 bits (175), Expect = 2.0e-13
Identity = 36/48 (75.00%), Postives = 43/48 (89.58%), Query Frame = 0 

Query: 18  DLDLADIDVVDEELKWVKEIGDKLRSEAMKVLERGTKGLNQAEMGTGL 66
           + DL  IDV+DEE+K+V EIG+KLRSEAMKVLERG +GLNQAE+GTGL
Sbjct: 210 EYDLFGIDVIDEEIKFVTEIGEKLRSEAMKVLERGMEGLNQAEVGTGL 257

[Close]
BLAST of Bhi09G000061 vs. ExPASy Swiss-Prot
Match: Q9C9V9 (Conserved oligomeric Golgi complex subunit 5 OS=Arabidopsis thaliana OX=3702 GN=COG5 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.8e-12
Identity = 36/48 (75.00%), Postives = 43/48 (89.58%), Query Frame = 0 

Query: 18  DLDLADIDVVDEELKWVKEIGDKLRSEAMKVLERGTKGLNQAEMGTGL 66
           + DL  IDV+DEE+K+V EIG+KLRSEAMKVLERG +GLNQAE+GTGL
Sbjct: 210 EYDLFGIDVIDEEIKFVTEIGEKLRSEAMKVLERGMEGLNQAEVGTGL 257

[Close]
BLAST of Bhi09G000061 vs. ExPASy TrEMBL
Match: A0A6J1I3W6 (Conserved oligomeric Golgi complex subunit 5 OS=Cucurbita maxima OX=3661 GN=LOC111469676 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.5e-16
Identity = 55/81 (67.90%), Postives = 57/81 (70.37%), Query Frame = 0 

Query: 2   KLRDLASPSTDESENLDL-----------------DLADIDVVDEELKWVKEIGDKLRSE 61
           KLRDLAS S DE E LDL                 DLA IDVVDEELKWV EIGDKLRSE
Sbjct: 184 KLRDLASASADEPEKLDLAKAAQLHCEILSLCNEYDLAGIDVVDEELKWVNEIGDKLRSE 243

Query: 62  AMKVLERGTKGLNQAEMGTGL 66
           AMKVLERG +GLNQAE+GTGL
Sbjct: 244 AMKVLERGMEGLNQAEVGTGL 264

[Close]
BLAST of Bhi09G000061 vs. ExPASy TrEMBL
Match: A0A6J1G6L1 (Conserved oligomeric Golgi complex subunit 5 OS=Cucurbita moschata OX=3662 GN=LOC111451297 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.5e-16
Identity = 55/81 (67.90%), Postives = 57/81 (70.37%), Query Frame = 0 

Query: 2   KLRDLASPSTDESENLDL-----------------DLADIDVVDEELKWVKEIGDKLRSE 61
           KLRDLAS S DE E LDL                 DLA IDVVDEELKWV EIGDKLRSE
Sbjct: 184 KLRDLASASADEPEKLDLAKAAQLHCEILSLCNEYDLAGIDVVDEELKWVNEIGDKLRSE 243

Query: 62  AMKVLERGTKGLNQAEMGTGL 66
           AMKVLERG +GLNQAE+GTGL
Sbjct: 244 AMKVLERGMEGLNQAEVGTGL 264

[Close]
BLAST of Bhi09G000061 vs. ExPASy TrEMBL
Match: A0A6J1D8Q0 (Conserved oligomeric Golgi complex subunit 5 OS=Momordica charantia OX=3673 GN=LOC111018066 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-16
Identity = 54/81 (66.67%), Postives = 57/81 (70.37%), Query Frame = 0 

Query: 2   KLRDLASPSTDESENLDL-----------------DLADIDVVDEELKWVKEIGDKLRSE 61
           KLRDLAS S DE E LDL                 DLA IDV+DEELKWV EIGDKLRSE
Sbjct: 185 KLRDLASASADEPEKLDLAKAAQLHCEILSLCNEFDLAGIDVIDEELKWVNEIGDKLRSE 244

Query: 62  AMKVLERGTKGLNQAEMGTGL 66
           AMKVLERG +GLNQAE+GTGL
Sbjct: 245 AMKVLERGMEGLNQAEVGTGL 265

[Close]
BLAST of Bhi09G000061 vs. ExPASy TrEMBL
Match: A0A0A0KD96 (Conserved oligomeric Golgi complex subunit 5 OS=Cucumis sativus OX=3659 GN=Csa_6G139240 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.6e-16
Identity = 53/81 (65.43%), Postives = 58/81 (71.60%), Query Frame = 0 

Query: 2   KLRDLASPSTDESENLDL-----------------DLADIDVVDEELKWVKEIGDKLRSE 61
           KLR+LAS S D+ E LDL                 DLA IDVVDEELKWVKEIGDKLR+E
Sbjct: 187 KLRELASASADDPEKLDLAKAAQLHCEILSLCTEFDLAGIDVVDEELKWVKEIGDKLRTE 246

Query: 62  AMKVLERGTKGLNQAEMGTGL 66
           AMKVLERG +GLNQAE+GTGL
Sbjct: 247 AMKVLERGMEGLNQAEVGTGL 267

[Close]
BLAST of Bhi09G000061 vs. ExPASy TrEMBL
Match: A0A5D3DVS4 (Conserved oligomeric Golgi complex subunit 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00520 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14
Identity = 52/81 (64.20%), Postives = 56/81 (69.14%), Query Frame = 0 

Query: 2   KLRDLASPSTDESENLDL-----------------DLADIDVVDEELKWVKEIGDKLRSE 61
           KLRDLAS S D+ E LDL                 DLA IDVVDEELKWVKEIG+KLR E
Sbjct: 187 KLRDLASASADDPEKLDLSKAAQLHCEILSLCNEFDLAGIDVVDEELKWVKEIGEKLRIE 246

Query: 62  AMKVLERGTKGLNQAEMGTGL 66
           AMKVLERG + LNQAE+GTGL
Sbjct: 247 AMKVLERGMESLNQAEVGTGL 267

The following BLAST results are available for this feature:
BLAST of Bhi09G000061 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G67930.12.0e-1375.00Golgi transport complex protein-related [more]
BLAST of Bhi09G000061 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C9V92.8e-1275.00Conserved oligomeric Golgi complex subunit 5 OS=Arabidopsis thaliana OX=3702 GN=... [more]
BLAST of Bhi09G000061 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I3W62.5e-1667.90Conserved oligomeric Golgi complex subunit 5 OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1G6L12.5e-1667.90Conserved oligomeric Golgi complex subunit 5 OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1D8Q03.3e-1666.67Conserved oligomeric Golgi complex subunit 5 OS=Momordica charantia OX=3673 GN=L... [more]
A0A0A0KD969.6e-1665.43Conserved oligomeric Golgi complex subunit 5 OS=Cucumis sativus OX=3659 GN=Csa_6... [more]
A0A5D3DVS41.1e-1464.20Conserved oligomeric Golgi complex subunit 5 OS=Cucumis melo var. makuwa OX=1194... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M000061Bhi09M000061mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
cellular_component GO:0017119 Golgi transport complex