Bhi08G001781 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G001781
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	60S ribosomal protein L11
Location	chr8: 61987836 .. 61989190 (-)
RNA-Seq Expression	Bhi08G001781
Synteny	Bhi08G001781

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACCCGTTTCTGTTAGATGTTCATATTTGTTTCATGTCTTATGATTGCAGTGTCAAATTTGTAGAGGACTAGCTGATTGATTTATATTTCTGACGCTAACCTGACGCAAATTGCAGGCTTCAGAGAAGAAGCTCTCGAACCCCATGCGAGATATTAAAGTCCAGAAGCTGGTTCTTAACATCTCCGTCGGTGAAAGCGGCGATCGTCTCACCAGAGCCGCCAAGGTTTCATCCCCTCTTCTTTAGCGCACTGGTTTTTCCACCTTTATAACTTCACCCCATTTGCATCTTTATTGATTTCTTGCATTTTATATCGGTTTCTTTATCCTCAGGTGCTCGAACAACTCAGTGGCCAATCCCCCGTCTTCTCTAAAGGTGCTGTGGCTATGTCATTTCAAATTTAAGTTGTTTTATTCTTAGCCCCTTAATTTAATCACTATTGTTTAGATTATCTAATTTTCGTTTCTGGGAATGAAACAGCCCGTTACACCGTTCGGTCTTTTGGGATCAGGCGTAACGAGAAGATCGCCTGCTATGTCACTGTGAGGGGCGAAAAGGCAATGCAACTTCTTGAAAGTGGTTTAAAAGTTAAGGAATACGAACTCTTGCGCAGGAACTTCAGTGATACAGGCTGCTTTGGTTTTGGTATTCAGGAGCATATTGATCTTGGAATCAAGTCAGTTTTCAATATTCTTATTTCTTTCTTAATCCTTTTGTGTTTTCTTTAGCTAAAGATCTTTGTGCTCGTTTTATGTTTTGCTGGCTCATTTGCAACCTTATGGCCTACCTTACAACGATCTGAGAACATCCATTCATTAGTTTTGATTTTTTCTGTAGTTACAGGAATTGCAACTGCCCTGACTAGAAATCTTTGAATACAGATTATAATGTGTTTGTCGTGATGTAGAAACATAGTTTACACGTGAATCAAATGCACATATTGAATTGAGACTCGAGAAGTTTAAACCTTTGATTGTATTTGGTTATGCATCAGTGGTTTTCCACTCCGTAAATTGTGTACCAGCTGAAAATTTATAAGCCAAGTAAAATCCTAAAGGGTCTAGTTTTCCTGACTTAGAATGCTAACGTATGCGCATTATTGAGCTTCATGGAGGCTGGTGTTTGACAAATAATTACTTTGCTTCATCTTTAGGTATGACCCTTCGACTGGTATATATGGTATGGACTTCTATGTTGTTCTAGAACGTCCAGGCTATCGTGTTGGTCGTCGACGTCGATGCAAGTCAAGTGTTGGAATTCAACATAGAGTCACCAAAGAGGATGCTATGAAGTGGTTTCAAGTTAAGTATGAAGGTGTCATCCTTAATAAGTCCCAGAACATTACAGGCTAG

mRNA sequence

ATGGCTTCAGAGAAGAAGCTCTCGAACCCCATGCGAGATATTAAAGTCCAGAAGCTGGTTCTTAACATCTCCGTCGGTGAAAGCGGCGATCGTCTCACCAGAGCCGCCAAGGTGCTCGAACAACTCAGTGGCCAATCCCCCGTCTTCTCTAAAGCCCGTTACACCGTTCGGTCTTTTGGGATCAGGCGTAACGAGAAGATCGCCTGCTATGTCACTGTGAGGGGCGAAAAGGCAATGCAACTTCTTGAAAGTGGTTTAAAAGTTAAGGAATACGAACTCTTGCGCAGGAACTTCAGTGATACAGGCTGCTTTGGTTTTGGTATTCAGGAGCATATTGATCTTGGAATCAAGTATGACCCTTCGACTGGTATATATGGTATGGACTTCTATGTTGTTCTAGAACGTCCAGGCTATCGTGTTGGTCGTCGACGTCGATGCAAGTCAAGTGTTGGAATTCAACATAGAGTCACCAAAGAGGATGCTATGAAGTGGTTTCAAGTTAAGTATGAAGGTGTCATCCTTAATAAGTCCCAGAACATTACAGGCTAG

Coding sequence (CDS)

ATGGCTTCAGAGAAGAAGCTCTCGAACCCCATGCGAGATATTAAAGTCCAGAAGCTGGTTCTTAACATCTCCGTCGGTGAAAGCGGCGATCGTCTCACCAGAGCCGCCAAGGTGCTCGAACAACTCAGTGGCCAATCCCCCGTCTTCTCTAAAGCCCGTTACACCGTTCGGTCTTTTGGGATCAGGCGTAACGAGAAGATCGCCTGCTATGTCACTGTGAGGGGCGAAAAGGCAATGCAACTTCTTGAAAGTGGTTTAAAAGTTAAGGAATACGAACTCTTGCGCAGGAACTTCAGTGATACAGGCTGCTTTGGTTTTGGTATTCAGGAGCATATTGATCTTGGAATCAAGTATGACCCTTCGACTGGTATATATGGTATGGACTTCTATGTTGTTCTAGAACGTCCAGGCTATCGTGTTGGTCGTCGACGTCGATGCAAGTCAAGTGTTGGAATTCAACATAGAGTCACCAAAGAGGATGCTATGAAGTGGTTTCAAGTTAAGTATGAAGGTGTCATCCTTAATAAGTCCCAGAACATTACAGGCTAG

Protein sequence

MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNITG

Homology

[Close]

BLAST of Bhi08G001781 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 357.5 bits (916), Expect = 6.6e-99
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Bhi08G001781 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 357.5 bits (916), Expect = 6.6e-99
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Bhi08G001781 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 357.5 bits (916), Expect = 6.6e-99
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Bhi08G001781 vs. TAIR 10
Match: AT5G45775.2 (Ribosomal L5P family protein )

HSP 1 Score: 357.5 bits (916), Expect = 6.6e-99
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Bhi08G001781 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 339.0 bits (868), Expect = 2.4e-93
Identity = 166/172 (96.51%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 11  MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACY 70
           MRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACY
Sbjct: 1   MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 60

Query: 71  VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 130
           VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY
Sbjct: 61  VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 120

Query: 131 VVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNITG 183
           VVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNITG
Sbjct: 121 VVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 172

[Close]

BLAST of Bhi08G001781 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 357.5 bits (916), Expect = 9.2e-98
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Bhi08G001781 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2)

HSP 1 Score: 357.5 bits (916), Expect = 9.2e-98
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Bhi08G001781 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 2.5e-95
Identity = 172/180 (95.56%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDF+VVLERPGYRVGRRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180

[Close]

BLAST of Bhi08G001781 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2)

HSP 1 Score: 342.8 bits (878), Expect = 2.4e-93
Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQ 179
           STGIYGMDFYVVLER GYRV RRRRCKS VGIQHRVTKEDAMKWFQVKYEGVILNK+Q
Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178

[Close]

BLAST of Bhi08G001781 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.4e-93
Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQ 179
           STGIYGMDFYVVLER GYRV RRRRCKS VGIQHRVTKEDAMKWFQVKYEGVILNK+Q
Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178

[Close]

BLAST of Bhi08G001781 vs. ExPASy TrEMBL
Match: A0A5A7UMH0 (60S ribosomal protein L11-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002400 PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 7.3e-98
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Bhi08G001781 vs. ExPASy TrEMBL
Match: A0A0A0LUL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470310 PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 7.3e-98
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Bhi08G001781 vs. ExPASy TrEMBL
Match: A0A1S3B809 (60S ribosomal protein L11-1 OS=Cucumis melo OX=3656 GN=LOC103487028 PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 7.3e-98
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Bhi08G001781 vs. ExPASy TrEMBL
Match: A0A200R2R8 (Ribosomal protein L5 OS=Macleaya cordata OX=56857 GN=BVC80_9043g45 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.2e-97
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKS VGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Bhi08G001781 vs. ExPASy TrEMBL
Match: A0A6J1IU83 (60S ribosomal protein L11-1 OS=Cucurbita maxima OX=3661 GN=LOC111478629 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

Query: 181 T 182
           +
Sbjct: 181 S 181

The following BLAST results are available for this feature:

BLAST of Bhi08G001781 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42740.1	6.6e-99	96.70	ribosomal protein large subunit 16A	[more]
AT3G58700.1	6.6e-99	96.70	Ribosomal L5P family protein	[more]
AT4G18730.1	6.6e-99	96.70	ribosomal protein L16B	[more]
AT5G45775.2	6.6e-99	96.70	Ribosomal L5P family protein	[more]
AT5G45775.1	2.4e-93	96.51	Ribosomal L5P family protein	[more]

BLAST of Bhi08G001781 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42795	9.2e-98	96.70	60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2	[more]
P42794	9.2e-98	96.70	60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2	[more]
P46287	2.5e-95	95.56	60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1	[more]
A2YDY2	2.4e-93	95.51	60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 S...	[more]
Q0DK10	2.4e-93	95.51	60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2...	[more]

BLAST of Bhi08G001781 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMH0	7.3e-98	100.00	60S ribosomal protein L11-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A0A0LUL5	7.3e-98	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470310 PE=3 SV=1	[more]
A0A1S3B809	7.3e-98	100.00	60S ribosomal protein L11-1 OS=Cucumis melo OX=3656 GN=LOC103487028 PE=3 SV=1	[more]
A0A200R2R8	6.2e-97	98.90	Ribosomal protein L5 OS=Macleaya cordata OX=56857 GN=BVC80_9043g45 PE=3 SV=1	[more]
A0A6J1IU83	1.1e-96	99.45	60S ribosomal protein L11-1 OS=Cucurbita maxima OX=3661 GN=LOC111478629 PE=3 SV=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002132	Ribosomal protein L5	PIRSF	PIRSF002161	RPL5p_RPL5a_RPL11e_RPL5o	coord: 1..172 e-value: 3.7E-43 score: 145.1
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 1..181
IPR031310	Ribosomal protein L5, N-terminal	PFAM	PF00281	Ribosomal_L5	coord: 9..62 e-value: 8.7E-21 score: 74.0
IPR031309	Ribosomal protein L5, C-terminal	PFAM	PF00673	Ribosomal_L5_C	coord: 66..164 e-value: 6.1E-21 score: 74.4
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 2..177 e-value: 7.2E-73 score: 245.9
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 8..173
None	No IPR available	PANTHER	PTHR11994:SF31	60S RIBOSOMAL PROTEIN L11-1	coord: 1..181
IPR020929	Ribosomal protein L5, conserved site	PROSITE	PS00358	RIBOSOMAL_L5	coord: 39..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001781	Bhi08M001781	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome