Bhi08G001729 (gene) Wax gourd (B227) v1

Overview
NameBhi08G001729
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
Locationchr8: 60890207 .. 60893643 (-)
RNA-Seq ExpressionBhi08G001729
SyntenyBhi08G001729
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGGCTCCGGTTTTTTCACGTTCATCAGTTGGGCGAGCGACAGTTTCCTTGTTGAATCAAAACTCGAATCAAGAGCATTGTTTCCAGTCCAAAATCCGAGAGAAGATAGAGGCTGAACCAAGCAAAGGAAGAAGGTGGAAATGGTTTGTGTATCTTTATCTTCTGCTGTTTCACTTTACAATCCCTCTCTCTATAGATCCAAGCTCTCCGTTCCTCTCTCGCTAAGATCTTCACCGCCAAATGCAAAGCTCTCGTTCAGTCCTGCCGCTAAACAGAGTTCCATCTGTTACAATCCGCTTAGGTAATTCGAGGCTCCGGAATCCTGCTAGATTGATTGAGTAGTAATGGTTTTGGTTTAATAAAATTGAGATTTTTAAAAAAGGAAAGTTGTGAATCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCTGCGATTACCAAGAAGAGGAGTCGTGGTTTAAGTGCTATTTGTTACGCTATGCCCGTTAACGCCCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGCGTAATTCTCCCTTCTCTCTATCAGATTCTCGTGTAATTGTATACAAGCACCATCTCGTCTAATACATGATCTTATTATATCTTTGGAACTGTGCTTTTATTTATCGTTGTTTTGCTTCTCAACTATATGGAATTTACTACTTTTAATCTTCGAGGTACGTTTCTGTGGAATCAGCACTGAATGCTCAATTTTAACCAATACTCAGATGGGTTTGTAAATGCTTTGCTACAATTCCTTTTATTGCGGTAGATAATTATTTTCATTTAAGTCGATAGCATTCAGTGGCTACTTTTATATTGTCAATATGCCACCACTTTCGTTTTCATCTGCTGTTTTAGAACCCATTGCACGAATCAAAGTATAATTTTTAAAACCTTAAGTTTCTTCACCAGGGTTTTAATGCTAGCAAAGGGGACTGGGATTCAGAAGTCATTTATTGTTCCGCTATTTGCTCTTCTGGCACCTGCAAGTGTTGTCTCGTGGATTAAGTAAGCCTCGTGAAAATCCTCTGTGTATTACTACCCCGTTTCTCCTTACGATCACATAGATACATTGACTGTCTTCAAGAAAATCATCTTCAAGAATTCTCTCTATTCAGTATCTATCAGTATGATGCCAAGATTTATGAGGAATTAGTTCCAATTTATAAATGGGTCAATGTTTTGGTTCTAACTTCTATTTCAGAGGAGAATACGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTTATCCCCGGTATAATCTTCTGTCTCCTTCACTGGATAGCTAATGAATTTAATTGCTAGTTATCACACTTTATCTTGTAAGGAACCTTAGTTTATAGCTTAGCTAGAAACGTATTAGTTTGAACCTCATTTTATTCAATCAACTAAAAGGGTTCCACTCTGTACAATCCACTGATTTCGTAGATAATTCATAGGAAGTCGGATGCTGGGTTCTTTTGGATGTAGGTGAATTGGAGATACCATTCATATCGTTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAGCTTAAGGTAAACATTTAAACTTTTAATCAGATTGAGCTTTATAATTTTTCCAATCTCAGGATCTGATTATTATCTGTAATTGCAGGGGAACTCAAGAAGGAAACATTATCTCCCTAATGATAGCAGCATATTTGGCCTTCCAGCATTTCTCTAGAGCGGGCAGTTTTCGGAGAGCTTTTGACCAGAATTCAATTGTTGCAACAGTAGCAGTCATTTGTTTTACTGCTGTCTCATTTCTGCTCGTGATCTAAGTTCCTTAGTCACTCCCAAGTAAACCTTATCGGTTAAATCTTCAATAAACACTATTGGTCATCCTGTAATAGTTGCACAATAGTCAGAATGTACAGACTTTCCCTTTTGTGTTTATAAATGCTATAAAGAAATTTTCCTTTCTTCGTGCTTGCTTGATCTCAATCACCCTCCATCTCTTTTTAGTTATCACAAAATTGCATTGGATTGAACCTAGACAATCATTTGTTTCCTTTTTAAATAACATCGGTCCTACTCGTTATATATACGAGCTTGTGAACTCACCTTCTAGCATCTACTTTTTTTGTATAATTTGTACATTGTACAGTGAACAATCTTAAATTGGACAATTTGTCATTCATAGGTAAAACTAAATGAACCCCTGCAAGCCGAAGTTCAAGTACAATGTCTTCCCTGGAAAATCAACCTAAAGAGCTTCCAAACGGAAGTGACTTATCTATATTATTTGCTAACATTTGTCCAAAATGGAATTGACTTGTCTTTATCCTTTTACTGGCTAACAATGTGAAATATCGTATGGCTAGCATATGACCTATTTATTTCTTTAATGTACTGATGTATGTTCCTGTGGACTCCTTAGTTTTCTAATGCATAACCTGATTTATAACAGCAATAACTTACTATATAATCTTTCTTTTATCATATTGATGTCTAACAATGCAAAAATGTGCAGCAAATAATCAATTGCCATCTCTCTGTGGAGAGAAGAAATGATTCCTTCAGGTTACAGATGATTTGCAATGAGCAAACCCAGAAAGTAAGTCATGGTCAAGAGCAGCACCGATCGTTTTGATATTGAAGTAGCTGAGCTGGGCATGCCTGATGGTTCTGCACCATAGATTGATGGATCTGTGGGTGTATATGTCGGGTTTGTGGTGTCTGGCGGTGTCATTGTTGGGATCGTGGTGGCTGGAGGTGGTGGTGGTGGGATTACAGGTGCCGGCGGTGTTGGGTTTGGGTTTGCTGGTGGAGGGGGGCTGTCAAATACATAAAGAAATTAGTTAGCTCTGATTTTGCTTCCTTTACTGATTCCTTTCCTTTTATGGGTATCTTATAGTCTCTTAGTAAAATGAATACTGAGCTCTTAAGGAATTACCTTGGCATAGCTCTGGGTGTTGCATAGTGACAGTTACCATTACCTGCAATATAATATAGAAAAGACAATTGTCAATAAAAAGTTTCAACTGACCAATTTATGAGATTTTATTTCACCTTTGAGCTATGACTTTGTTAGGGATCACTACCTCGTTTTTATCTTTAGATGATAGGATATGACCTTTTTGGGAAATTTGTCACTAAAGTTTCCTTATCCCTTGTTCTCTACTAGGAAAGGAGAATGAGAGAGATAAAATTGAGAATTAAGTACATTCAGGAAAAGGTTGAATGAAAAGTAGTAGTCCTAGGTATAACACAACGGATTACCTACCAAGAAAAGCATAATTTGTGATTTAATGTTCTTGTCACTTTGTAGTATGGCCAATTTCTATTGGATAAAAAAATGTTAGGAGGATTCACAGATTAAGTAGGAACTCCTGTAATCAATAGAACCTGTCTGAGCTAAGTTTGATAGTTCAGAAAACCTATTAAATTTGGCTATCATAAGTGACAA

mRNA sequence

CCGGCTCCGGTTTTTTCACGTTCATCAGTTGGGCGAGCGACAGTTTCCTTGTTGAATCAAAACTCGAATCAAGAGCATTGTTTCCAGTCCAAAATCCGAGAGAAGATAGAGGCTGAACCAAGCAAAGGAAGAAGGTGGAAATGGTTTGTGTATCTTTATCTTCTGCTGTTTCACTTTACAATCCCTCTCTCTATAGATCCAAGCTCTCCGTTCCTCTCTCGCTAAGATCTTCACCGCCAAATGCAAAGCTCTCGTTCAGTCCTGCCGCTAAACAGAGTTCCATCTGTTACAATCCGCTTAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCTGCGATTACCAAGAAGAGGAGTCGTGGTTTAAGTGCTATTTGTTACGCTATGCCCGTTAACGCCCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGCGGTTTTAATGCTAGCAAAGGGGACTGGGATTCAGAAGTCATTTATTGTTCCGCTATTTGCTCTTCTGGCACCTGCAAGTGTTGTCTCGTGGATTAAAGGAGAATACGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTTATCCCCGGTGAATTGGAGATACCATTCATATCGTTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAGCTTAAGGGGAACTCAAGAAGGAAACATTATCTCCCTAATGATAGCAGCATATTTGGCCTTCCAGCATTTCTCTAGAGCGGGCAGTTTTCGGAGAGCTTTTGACCAGAATTCAATTGTTGCAACAGTAGCAGTCATTTGTTTTACTGCTGTCTCATTTCTGCTCGTGATCTAAGTTCCTTAGTCACTCCCAAGTAAACCTTATCGGTTAAATCTTCAATAAACACTATTGGTCATCCTGTAATAGTTGCACAATAGTCAGAATGTACAGACTTTCCCTTTTGTGTTTATAAATGCTATAAAGAAATTTTCCTTTCTTCGTGCTTGCTTGATCTCAATCACCCTCCATCTCTTTTTAGTTATCACAAAATTGCATTGGATTGAACCTAGACAATCATTTGTTTCCTTTTTAAATAACATCGGTCCTACTCGTTATATATACGAGCTTGTGAACTCACCTTCTAGCATCTACTTTTTTTGTATAATTTGTACATTGTACAGTGAACAATCTTAAATTGGACAATTTGTCATTCATAGGTAAAACTAAATGAACCCCTGCAAGCCGAAGTTCAAGTACAATGTCTTCCCTGGAAAATCAACCTAAAGAGCTTCCAAACGGAAGTGACTTATCTATATTATTTGCTAACATTTGTCCAAAATGGAATTGACTTGTCTTTATCCTTTTACTGGCTAACAATGTGAAATATCGTATGGCTAGCATATGACCTATTTATTTCTTTAATGTACTGATGTATGTTCCTGTGGACTCCTTAGTTTTCTAATGCATAACCTGATTTATAACAGCAATAACTTACTATATAATCTTTCTTTTATCATATTGATGTCTAACAATGCAAAAATGTGCAGCAAATAATCAATTGCCATCTCTCTGTGGAGAGAAGAAATGATTCCTTCAGGTTACAGATGATTTGCAATGAGCAAACCCAGAAAGTAAGTCATGGTCAAGAGCAGCACCGATCGTTTTGATATTGAAGTAGCTGAGCTGGGCATGCCTGATGGTTCTGCACCATAGATTGATGGATCTGTGGGTGTATATGTCGGGTTTGTGGTGTCTGGCGGTGTCATTGTTGGGATCGTGGTGGCTGGAGGTGGTGGTGGTGGGATTACAGGTGCCGGCGGTGTTGGGTTTGGGTTTGCTGGTGGAGGGGGGCTGTCAAATACATAAAGAAATTAGTTAGCTCTGATTTTGCTTCCTTTACTGATTCCTTTCCTTTTATGGGTATCTTATAGTCTCTTAGTAAAATGAATACTGAGCTCTTAAGGAATTACCTTGGCATAGCTCTGGGTGTTGCATAGTGACAGTTACCATTACCTGCAATATAATATAGAAAAGACAATTGTCAATAAAAAGTTTCAACTGACCAATTTATGAGATTTTATTTCACCTTTGAGCTATGACTTTGTTAGGGATCACTACCTCGTTTTTATCTTTAGATGATAGGATATGACCTTTTTGGGAAATTTGTCACTAAAGTTTCCTTATCCCTTGTTCTCTACTAGGAAAGGAGAATGAGAGAGATAAAATTGAGAATTAAGTACATTCAGGAAAAGGTTGAATGAAAAGTAGTAGTCCTAGGTATAACACAACGGATTACCTACCAAGAAAAGCATAATTTGTGATTTAATGTTCTTGTCACTTTGTAGTATGGCCAATTTCTATTGGATAAAAAAATGTTAGGAGGATTCACAGATTAAGTAGGAACTCCTGTAATCAATAGAACCTGTCTGAGCTAAGTTTGATAGTTCAGAAAACCTATTAAATTTGGCTATCATAAGTGACAA

Coding sequence (CDS)

ATGGTTTGTGTATCTTTATCTTCTGCTGTTTCACTTTACAATCCCTCTCTCTATAGATCCAAGCTCTCCGTTCCTCTCTCGCTAAGATCTTCACCGCCAAATGCAAAGCTCTCGTTCAGTCCTGCCGCTAAACAGAGTTCCATCTGTTACAATCCGCTTAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCTGCGATTACCAAGAAGAGGAGTCGTGGTTTAAGTGCTATTTGTTACGCTATGCCCGTTAACGCCCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGCGGTTTTAATGCTAGCAAAGGGGACTGGGATTCAGAAGTCATTTATTGTTCCGCTATTTGCTCTTCTGGCACCTGCAAGTGTTGTCTCGTGGATTAAAGGAGAATACGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTTATCCCCGGTGAATTGGAGATACCATTCATATCGTTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAGCTTAAGGGGAACTCAAGAAGGAAACATTATCTCCCTAATGATAGCAGCATATTTGGCCTTCCAGCATTTCTCTAGAGCGGGCAGTTTTCGGAGAGCTTTTGACCAGAATTCAATTGTTGCAACAGTAGCAGTCATTTGTTTTACTGCTGTCTCATTTCTGCTCGTGATCTAA

Protein sequence

MVCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSEGIATAAITKKRSRGLSAICYAMPVNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFALLAPASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQEGNIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI
Homology
BLAST of Bhi08G001729 vs. TAIR 10
Match: AT1G29395.1 (COLD REGULATED 314 INNER MEMBRANE 1 )

HSP 1 Score: 228.0 bits (580), Expect = 7.6e-60
Identity = 125/230 (54.35%), Postives = 167/230 (72.61%), Query Frame = 0

Query: 2   VCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSEG 61
           +C+S S  VSL++   + S     L LRS P +           S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLHHQKPFLS-----LKLRSRPSDLS---GLGRHTSPVCFNPLRLSGDRQR 63

Query: 62  IATAA--ITKKRSRGLSAICYAMPVNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFAL 121
            AT +  + K+R RG S +CYA P++A +LQWISTIS   LMLA+GTGI KS +VPLFAL
Sbjct: 64  TATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFAL 123

Query: 122 LAPASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQE 181
            AP+S+V+WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV ++RG QE
Sbjct: 124 HAPSSIVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQE 183

Query: 182 GNIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 230
           G II++ I+ +LAFQHFSRAGS  +A+++ S++ATVA+I  T VS LL++
Sbjct: 184 GAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

BLAST of Bhi08G001729 vs. TAIR 10
Match: AT1G29390.1 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-59
Identity = 131/231 (56.71%), Postives = 162/231 (70.13%), Query Frame = 0

Query: 2   VCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSEG 61
           +C+S S  VSL++      K  + L LR  P N           S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLHH-----QKPFLALKLRPRPSNIS---GLGHSTSVVCFNPLRLSADRQR 63

Query: 62  IAT--AAITKKRSRGLSAICYAMP-VNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFA 121
            AT  A   K+R RG S +CYA P ++   LQWISTIS   LM A+GTGI KSF+VPLFA
Sbjct: 64  TATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFA 123

Query: 122 LLAPASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQ 181
           L AP  +VSW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV S+RG Q
Sbjct: 124 LQAPMGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQ 183

Query: 182 EGNIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 230
           EG I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVA+I  T VSFL +I
Sbjct: 184 EGAILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

BLAST of Bhi08G001729 vs. TAIR 10
Match: AT1G29390.2 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 213.4 bits (542), Expect = 1.9e-55
Identity = 111/167 (66.47%), Postives = 134/167 (80.24%), Query Frame = 0

Query: 64  TAAITKKRSRGLSAICYAMP-VNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFALLAP 123
           +A   K+R RG S +CYA P ++   LQWISTIS   LM A+GTGI KSF+VPLFAL AP
Sbjct: 17  SARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFALQAP 76

Query: 124 ASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQEGNI 183
             +VSW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV S+RG QEG I
Sbjct: 77  MGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQEGAI 136

Query: 184 ISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 230
           +SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVA+I  T VSFL +I
Sbjct: 137 LSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 183

BLAST of Bhi08G001729 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 45/138 (32.61%), Postives = 77/138 (55.80%), Query Frame = 0

Query: 89  LQWISTISSAVLMLAKGTG----IQKSFIVPLFALLAPASVVSWIKGEYGIWSAFLALLV 148
           LQW ++I +  L++   T     +  + +VP      P+ +  +  G++G W A +A++V
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 149 RLFF--FIPGELEIPFISLLLVIVAPYQVQ-SLRGTQEGNIISLMIAAYLAFQHFSRAGS 208
           RLFF    P  LEIP   +L+V+V+P  +  +LR +  G +I L+IA YL  +H   +G 
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 209 FRRAFDQ-NSIVATVAVI 219
           F+ +F Q N I  T+ ++
Sbjct: 170 FKNSFTQKNGISNTIGIV 187

BLAST of Bhi08G001729 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 )

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-12
Identity = 41/127 (32.28%), Postives = 74/127 (58.27%), Query Frame = 0

Query: 89  LQWISTISSAVLMLAKGTG----IQKSFIVPLFALLAPASVVSWIKGEYGIWSAFLALLV 148
           L+++++ ++  L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++
Sbjct: 51  LKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVL 110

Query: 149 RLFF--FIPGELEIPFISLLLVIVAP-YQVQSLRGTQEGNIISLMIAAYLAFQHFSRAGS 208
           RLFF    P  LE+P   +LL++V+P +    +RGT  G +ISL I  YL  +H   +G 
Sbjct: 111 RLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGG 170

BLAST of Bhi08G001729 vs. ExPASy Swiss-Prot
Match: Q94AL8 (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM1 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-58
Identity = 125/230 (54.35%), Postives = 167/230 (72.61%), Query Frame = 0

Query: 2   VCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSEG 61
           +C+S S  VSL++   + S     L LRS P +           S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLHHQKPFLS-----LKLRSRPSDLS---GLGRHTSPVCFNPLRLSGDRQR 63

Query: 62  IATAA--ITKKRSRGLSAICYAMPVNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFAL 121
            AT +  + K+R RG S +CYA P++A +LQWISTIS   LMLA+GTGI KS +VPLFAL
Sbjct: 64  TATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFAL 123

Query: 122 LAPASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQE 181
            AP+S+V+WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV ++RG QE
Sbjct: 124 HAPSSIVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQE 183

Query: 182 GNIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 230
           G II++ I+ +LAFQHFSRAGS  +A+++ S++ATVA+I  T VS LL++
Sbjct: 184 GAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

BLAST of Bhi08G001729 vs. ExPASy Swiss-Prot
Match: F4I1G5 (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM2 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.4e-58
Identity = 131/231 (56.71%), Postives = 162/231 (70.13%), Query Frame = 0

Query: 2   VCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSEG 61
           +C+S S  VSL++      K  + L LR  P N           S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLHH-----QKPFLALKLRPRPSNIS---GLGHSTSVVCFNPLRLSADRQR 63

Query: 62  IAT--AAITKKRSRGLSAICYAMP-VNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFA 121
            AT  A   K+R RG S +CYA P ++   LQWISTIS   LM A+GTGI KSF+VPLFA
Sbjct: 64  TATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFA 123

Query: 122 LLAPASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQ 181
           L AP  +VSW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV S+RG Q
Sbjct: 124 LQAPMGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQ 183

Query: 182 EGNIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 230
           EG I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVA+I  T VSFL +I
Sbjct: 184 EGAILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

BLAST of Bhi08G001729 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 2.2e-11
Identity = 45/138 (32.61%), Postives = 77/138 (55.80%), Query Frame = 0

Query: 89  LQWISTISSAVLMLAKGTG----IQKSFIVPLFALLAPASVVSWIKGEYGIWSAFLALLV 148
           LQW ++I +  L++   T     +  + +VP      P+ +  +  G++G W A +A++V
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 149 RLFF--FIPGELEIPFISLLLVIVAPYQVQ-SLRGTQEGNIISLMIAAYLAFQHFSRAGS 208
           RLFF    P  LEIP   +L+V+V+P  +  +LR +  G +I L+IA YL  +H   +G 
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 209 FRRAFDQ-NSIVATVAVI 219
           F+ +F Q N I  T+ ++
Sbjct: 170 FKNSFTQKNGISNTIGIV 187

BLAST of Bhi08G001729 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.3e-11
Identity = 41/127 (32.28%), Postives = 74/127 (58.27%), Query Frame = 0

Query: 89  LQWISTISSAVLMLAKGTG----IQKSFIVPLFALLAPASVVSWIKGEYGIWSAFLALLV 148
           L+++++ ++  L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++
Sbjct: 51  LKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVL 110

Query: 149 RLFF--FIPGELEIPFISLLLVIVAP-YQVQSLRGTQEGNIISLMIAAYLAFQHFSRAGS 208
           RLFF    P  LE+P   +LL++V+P +    +RGT  G +ISL I  YL  +H   +G 
Sbjct: 111 RLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGG 170

BLAST of Bhi08G001729 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09
Identity = 46/139 (33.09%), Postives = 74/139 (53.24%), Query Frame = 0

Query: 89  LQWISTISSAVLMLAK----GTGIQKSFIVPLFALLAPASVVSWIKGEYGIWSAFLALLV 148
           L+W+++I++  L++       T +  S ++P      P+ +    +GE G W AF+A++V
Sbjct: 48  LEWVASIAAIYLLVLDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVV 107

Query: 149 RLFF--FIPGELEIPFISLLLVIVAPYQVQ-SLRGTQEGNIISLMIAAYLAFQHFSRAGS 208
           +LFF       LE+P   +LL +VAP  +  + R +  G  I L I  YL  +H   +G 
Sbjct: 108 QLFFPKHAREYLELPVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGG 167

Query: 209 FRRAFDQ-NSIVATVAVIC 220
           FR AF + N I  TV +IC
Sbjct: 168 FRNAFTKANGISNTVGIIC 186

BLAST of Bhi08G001729 vs. ExPASy TrEMBL
Match: A0A5D3DB21 (Cold-regulated 413 inner membrane protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00120 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 207/229 (90.39%), Postives = 216/229 (94.32%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PS Y+SKLSVPLSLRSSPPNAKLS + AAKQSSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATAAITKKRSRGLSAICYAMPVNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFALL 120
           GIATA I KK++RGLSA CYAMPVN RTLQW+STISS VLMLAKGTGIQKSFIVPLFAL 
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQEG 180
           APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 NIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 230
            IISL+IAAYLAFQHFSRAGSF+RAFDQNSIVATVAVIC TAVSFL VI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

BLAST of Bhi08G001729 vs. ExPASy TrEMBL
Match: A0A1S3B961 (cold-regulated 413 inner membrane protein 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487404 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 207/229 (90.39%), Postives = 216/229 (94.32%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PS Y+SKLSVPLSLRSSPPNAKLS + AAKQSSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATAAITKKRSRGLSAICYAMPVNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFALL 120
           GIATA I KK++RGLSA CYAMPVN RTLQW+STISS VLMLAKGTGIQKSFIVPLFAL 
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQEG 180
           APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 NIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 230
            IISL+IAAYLAFQHFSRAGSF+RAFDQNSIVATVAVIC TAVSFL VI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

BLAST of Bhi08G001729 vs. ExPASy TrEMBL
Match: A0A0A0LXM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G459500 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 204/229 (89.08%), Postives = 213/229 (93.01%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PS Y+SKLSVPLSLRSSPPNAKLS + AAKQSSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATAAITKKRSRGLSAICYAMPVNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFALL 120
           G     I KK+SRGLSA+CYAMPVN RTLQWISTISS VLMLAKGTGIQKSFIVPLFAL 
Sbjct: 61  G-----INKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQEG 180
           APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 NIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 230
            IISL+IAAYLAFQHFSRAGSF+RAFDQNSIVATVAV+C TAVSFL VI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224

BLAST of Bhi08G001729 vs. ExPASy TrEMBL
Match: A0A6J1CH44 (cold-regulated 413 inner membrane protein 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111010803 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.6e-96
Identity = 190/229 (82.97%), Postives = 211/229 (92.14%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSE 60
           MVC+SLSSA SL+  SLY++KLS PLSLRS P +AKLS +PA K+SSICYNPLRFAVG+E
Sbjct: 1   MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNE 60

Query: 61  GIATAAITKKRSRGLSAICYAMPVNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFALL 120
           GIATAAI K+RSRGL+ +CYAMP+ AR +QWISTIS  VLMLA+GTGIQKSFIVPLFAL 
Sbjct: 61  GIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISYVVLMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQEG 180
           APASV+SWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG
Sbjct: 121 APASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 NIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 230
           +IISL+IAA+LAFQHFSRAGSFRRAFDQNSIVAT AV+C TA SFLLVI
Sbjct: 181 SIISLLIAAFLAFQHFSRAGSFRRAFDQNSIVATAAVVCVTAASFLLVI 229

BLAST of Bhi08G001729 vs. ExPASy TrEMBL
Match: A0A6J1K0I6 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490472 PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95
Identity = 193/229 (84.28%), Postives = 212/229 (92.58%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSE 60
           MVCV LSSA+SL++P L++SKLS PLSLRSS PNAKL+F+PAAKQSSIC NP+RF  GS+
Sbjct: 1   MVCV-LSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSD 60

Query: 61  GIATAAITKKRSRGLSAICYAMPVNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFALL 120
             +T AI KKR RGLSA+CYAMP++AR LQWISTISS +LMLA+GTGIQKSFIVPLFAL 
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQEG 180
           APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 NIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 230
            IISL+IAAYLAFQHFSRAGSFRRAFDQNSIVATVA+IC TAVSFLLVI
Sbjct: 181 TIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G29395.17.6e-6054.35COLD REGULATED 314 INNER MEMBRANE 1 [more]
AT1G29390.11.7e-5956.71cold regulated 314 thylakoid membrane 2 [more]
AT1G29390.21.9e-5566.47cold regulated 314 thylakoid membrane 2 [more]
AT4G37220.11.5e-1232.61Cold acclimation protein WCOR413 family [more]
AT3G50830.14.5e-1232.28cold-regulated 413-plasma membrane 2 [more]
Match NameE-valueIdentityDescription
Q94AL81.1e-5854.35Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thalia... [more]
F4I1G52.4e-5856.71Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thalia... [more]
O231642.2e-1132.61Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q9SVL66.3e-1132.28Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q9XIM71.6e-0933.09Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Match NameE-valueIdentityDescription
A0A5D3DB211.1e-10390.39Cold-regulated 413 inner membrane protein 2 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B9611.1e-10390.39cold-regulated 413 inner membrane protein 2, chloroplastic-like OS=Cucumis melo ... [more]
A0A0A0LXM71.2e-10089.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G459500 PE=3 SV=1[more]
A0A6J1CH446.6e-9682.97cold-regulated 413 inner membrane protein 1, chloroplastic-like OS=Momordica cha... [more]
A0A6J1K0I61.1e-9584.28cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cu... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008892Cold-regulated 413 proteinPFAMPF05562WCOR413coord: 67..219
e-value: 1.1E-50
score: 172.1
IPR008892Cold-regulated 413 proteinPANTHERPTHR33596COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2coord: 16..229
NoneNo IPR availablePANTHERPTHR33596:SF17COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 16..229

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M001729Bhi08M001729mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane