Bhi08G001577 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G001577
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr8: 55603542 .. 55603730 (+)
RNA-Seq Expression	Bhi08G001577
Synteny	Bhi08G001577

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATTCCTAAGAGATTTAGCCTTGAACGCCTCTTCCGATCCAAGAAGAATCACTCACCAGATGTCTCCCACTCTGATTCACCGTCTTTCGGCTCTGATAAGTCCTCTTCCTCTTCCTCTTTCGAGAATTTCTTCAAGCCGAACTACGCTGTTACCGACGATGATGCTGAACGAAGTCGACAGTGA

mRNA sequence

ATGAAAATTCCTAAGAGATTTAGCCTTGAACGCCTCTTCCGATCCAAGAAGAATCACTCACCAGATGTCTCCCACTCTGATTCACCGTCTTTCGGCTCTGATAAGTCCTCTTCCTCTTCCTCTTTCGAGAATTTCTTCAAGCCGAACTACGCTGTTACCGACGATGATGCTGAACGAAGTCGACAGTGA

Coding sequence (CDS)

ATGAAAATTCCTAAGAGATTTAGCCTTGAACGCCTCTTCCGATCCAAGAAGAATCACTCACCAGATGTCTCCCACTCTGATTCACCGTCTTTCGGCTCTGATAAGTCCTCTTCCTCTTCCTCTTTCGAGAATTTCTTCAAGCCGAACTACGCTGTTACCGACGATGATGCTGAACGAAGTCGACAGTGA

Protein sequence

MKIPKRFSLERLFRSKKNHSPDVSHSDSPSFGSDKSSSSSSFENFFKPNYAVTDDDAERSRQ

Homology

[Close]

BLAST of Bhi08G001577 vs. ExPASy TrEMBL
Match: A0A6J1HS37 (probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC111467281 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.8e-09
Identity = 40/51 (78.43%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 1  MKIPKRFSLERLFRSKKNHSPDVSHSDSPSFGSDKSSSSSSFENFFKPNYA 52
          MKIPKRFS +RLFRSKKN S DVS SD PSFGS  SSSSSS ENFFKP+ A
Sbjct: 1  MKIPKRFSPKRLFRSKKNPSADVSRSDPPSFGSGTSSSSSSSENFFKPHTA 51

[Close]

BLAST of Bhi08G001577 vs. ExPASy TrEMBL
Match: A0A5A7VA05 (Putative calcium-binding protein CML36 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold382G00410 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.8e-09
Identity = 39/49 (79.59%), Postives = 41/49 (83.67%), Query Frame = 0


Query: 1  MKIPKRFSLERLFRSKKNHSPDVSHSDSPSFGSDKSSSSSSFENFFKPN 50
          MKIPKRFS +RLFRSKK+ S DVS SD PSFGS  SSSSSS ENFFKPN
Sbjct: 2  MKIPKRFSPKRLFRSKKHQSADVSRSDPPSFGSGTSSSSSSSENFFKPN 50

[Close]

BLAST of Bhi08G001577 vs. ExPASy TrEMBL
Match: A0A0A0L0H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G355130 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.8e-09
Identity = 39/49 (79.59%), Postives = 41/49 (83.67%), Query Frame = 0


Query: 1  MKIPKRFSLERLFRSKKNHSPDVSHSDSPSFGSDKSSSSSSFENFFKPN 50
          MKIPKRFS +RLFRSKK+HS DVS SD PSFGS  SSSSSS ENFFK N
Sbjct: 2  MKIPKRFSPKRLFRSKKHHSADVSRSDPPSFGSGTSSSSSSSENFFKAN 50

[Close]

BLAST of Bhi08G001577 vs. ExPASy TrEMBL
Match: A0A1S3C5U3 (probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103497255 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.8e-09
Identity = 39/49 (79.59%), Postives = 41/49 (83.67%), Query Frame = 0


Query: 1  MKIPKRFSLERLFRSKKNHSPDVSHSDSPSFGSDKSSSSSSFENFFKPN 50
          MKIPKRFS +RLFRSKK+ S DVS SD PSFGS  SSSSSS ENFFKPN
Sbjct: 2  MKIPKRFSPKRLFRSKKHQSADVSRSDPPSFGSGTSSSSSSSENFFKPN 50

[Close]

BLAST of Bhi08G001577 vs. ExPASy TrEMBL
Match: A0A6J1F310 (probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC111439413 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-08
Identity = 39/51 (76.47%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 1  MKIPKRFSLERLFRSKKNHSPDVSHSDSPSFGSDKSSSSSSFENFFKPNYA 52
          MKIPKRFS +RLFRSKKN S +VS SD PSFGS  SSSSSS ENFFKP+ A
Sbjct: 1  MKIPKRFSPKRLFRSKKNPSAEVSRSDPPSFGSGTSSSSSSSENFFKPHTA 51

The following BLAST results are available for this feature:

BLAST of Bhi08G001577 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi08G001577 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi08G001577 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HS37	4.8e-09	78.43	probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC1114672...	[more]
A0A5A7VA05	4.8e-09	79.59	Putative calcium-binding protein CML36 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0L0H1	4.8e-09	79.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G355130 PE=4 SV=1	[more]
A0A1S3C5U3	4.8e-09	79.59	probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103497255 P...	[more]
A0A6J1F310	1.4e-08	76.47	probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001577	Bhi08M001577	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding