Bhi08G001547 (gene) Wax gourd (B227) v1

Overview
NameBhi08G001547
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionankyrin repeat-containing protein NPR4-like
Locationchr8: 54556437 .. 54556763 (+)
RNA-Seq ExpressionBhi08G001547
SyntenyBhi08G001547
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACTGTGGATCAAGCCTTATCAGGATGGCTTTTTGGGTCAATGATCCCTGCTGTAGTAGCCAATGGGGTGAACTTCAACTCTTCCAAAGAAGTGCAAAAAGATCTAGAACAAGTGTACGGAGCTACGAGCAAGGCACGAATCAACCAGCTGAGATGATTCTTCAAAACACAAAGAAAGGGAGAACAAGAACGGTTGACTATCTTGCAACAATTAAGCAAGTCTCTGAGAATCTTCAGCTAGCTGGAGCACCAGTGACCTTCTCTAACCTGATGTCCTATGTCTTATCGGGACTTCATGCTGATTACGTTGCTGTTGTCTGA

mRNA sequence

ATGGACAACTGTGGATCAAGCCTTATCAGGATGGCTTTTTGGGTCAATGATCCCTGCTGTAGTAGCCAATGGGGTGAACTTCAACTCTTCCAAAGAAGTGCAAAAAGATCTAGAACAAGTGTACGGAGCTACGAGCAAGGCACGAATCAACCAGCTGAGATGATTCTTCAAAACACAAAGAAAGGGAGAACAAGAACGGTTGACTATCTTGCAACAATTAAGCAAGTCTCTGAGAATCTTCAGCTAGCTGGAGCACCAGTGACCTTCTCTAACCTGATGTCCTATGTCTTATCGGGACTTCATGCTGATTACGTTGCTGTTGTCTGA

Coding sequence (CDS)

ATGGACAACTGTGGATCAAGCCTTATCAGGATGGCTTTTTGGGTCAATGATCCCTGCTGTAGTAGCCAATGGGGTGAACTTCAACTCTTCCAAAGAAGTGCAAAAAGATCTAGAACAAGTGTACGGAGCTACGAGCAAGGCACGAATCAACCAGCTGAGATGATTCTTCAAAACACAAAGAAAGGGAGAACAAGAACGGTTGACTATCTTGCAACAATTAAGCAAGTCTCTGAGAATCTTCAGCTAGCTGGAGCACCAGTGACCTTCTCTAACCTGATGTCCTATGTCTTATCGGGACTTCATGCTGATTACGTTGCTGTTGTCTGA

Protein sequence

MDNCGSSLIRMAFWVNDPCCSSQWGELQLFQRSAKRSRTSVRSYEQGTNQPAEMILQNTKKGRTRTVDYLATIKQVSENLQLAGAPVTFSNLMSYVLSGLHADYVAVV
Homology
[Close]
BLAST of Bhi08G001547 vs. ExPASy TrEMBL
Match: A0A0A0LUB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G064810 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06
Identity = 28/55 (50.91%), Postives = 41/55 (74.55%), Query Frame = 0 

Query: 54  MILQNTKKGRTRTVDYLATIKQVSENLQLAGAPVTFSNLMSYVLSGLHADYVAVV 109
           +ILQNT+KG  R  +YL+ +KQ  EN+QLAG+P++  +L SYVL GL  +Y+ +V
Sbjct: 194 IILQNTRKGTMRMTEYLSMMKQTLENMQLAGSPISHEDLFSYVLVGLDVEYIPIV 248

[Close]
BLAST of Bhi08G001547 vs. ExPASy TrEMBL
Match: A0A6J1DU77 (uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.1e-06
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 55  ILQNTKKGRTRTVDYLATIKQVSENLQLAGAPVTFSNLMSYVLSGLHADYVAVV 109
           +LQNTKK   +  +YL  +KQ SE+L+LAG PV F+ LMS VLSGL A+Y+ +V
Sbjct: 157 VLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIV 210

[Close]
BLAST of Bhi08G001547 vs. ExPASy TrEMBL
Match: A0A6J1DTZ7 (uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.1e-06
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 55  ILQNTKKGRTRTVDYLATIKQVSENLQLAGAPVTFSNLMSYVLSGLHADYVAVV 109
           +LQNTKK   +  +YL  +KQ SE+L+LAG PV F+ LMS VLSGL A+Y+ +V
Sbjct: 157 VLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIV 210

[Close]
BLAST of Bhi08G001547 vs. ExPASy TrEMBL
Match: A0A6J1CPQ7 (ankyrin repeat-containing protein NPR4-like OS=Momordica charantia OX=3673 GN=LOC111013443 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.7e-05
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 0 

Query: 56  LQNTKKGRTRTVDYLATIKQVSENLQLAGAPVTFSNLMSYVLSGLHADYVAVV 109
           LQNTKKG  +   YLA +KQ SE+L+LAG PVT S L S +L+G  A+Y+ ++
Sbjct: 150 LQNTKKGAMKMTXYLAFMKQTSEDLKLAGEPVTLSYLSSCILTGXEAEYLPIL 202

[Close]
BLAST of Bhi08G001547 vs. ExPASy TrEMBL
Match: A0A6J1CLV9 (uncharacterized protein LOC111012809 OS=Momordica charantia OX=3673 GN=LOC111012809 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.3e-04
Identity = 24/53 (45.28%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 56  LQNTKKGRTRTVDYLATIKQVSENLQLAGAPVTFSNLMSYVLSGLHADYVAVV 109
           LQ T+K + +  DYL+T+KQ+++ L LAG P++ S+L+S VL+GL+A+Y+ ++
Sbjct: 41  LQTTRKNQLKMSDYLSTMKQLADCLTLAGEPISTSSLLSSVLTGLNAEYLQII 93

The following BLAST results are available for this feature:
BLAST of Bhi08G001547 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi08G001547 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi08G001547 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUB01.8e-0650.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G064810 PE=4 SV=1[more]
A0A6J1DU775.1e-0655.56uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DTZ75.1e-0655.56uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CPQ79.7e-0552.83ankyrin repeat-containing protein NPR4-like OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1CLV96.3e-0445.28uncharacterized protein LOC111012809 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M001547Bhi08M001547mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane